RNA–Protein interactions for RNA: ENST00000438055.5

TTC3-209, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 3,606 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-209ENST00000438055 IGHG4P01861 327 aa12.92□□□□□ -0.34
TTC3-209ENST00000438055 KLK15Q9H2R5 256 aa12.92□□□□□ -0.34
TTC3-209ENST00000438055 M0R381 172 aa12.92□□□□□ -0.34
TTC3-209ENST00000438055 TAX1BP3O14907 124 aa12.92□□□□□ -0.34
TTC3-209ENST00000438055 PF4V1P10720 104 aa12.92□□□□□ -0.34
TTC3-209ENST00000438055 ARL3P36405 182 aa12.92□□□□□ -0.34
TTC3-209ENST00000438055 PAX8Q06710 450 aa12.92□□□□□ -0.34
TTC3-209ENST00000438055 GLMPQ8WWB7 406 aa12.92□□□□□ -0.34
TTC3-209ENST00000438055 FOXC2Q99958 501 aa12.92□□□□□ -0.34
TTC3-209ENST00000438055 FOXE3Q13461 319 aa12.92□□□□□ -0.34
TTC3-209ENST00000438055 ZFAND3Q9H8U3 227 aa12.91□□□□□ -0.34
TTC3-209ENST00000438055 PIEZO1Q92508 2521 aa12.91□□□□□ -0.34
TTC3-209ENST00000438055 IGLC6P0CF74 106 aa12.91□□□□□ -0.34
TTC3-209ENST00000438055 DEFB1P60022 68 aa12.91□□□□□ -0.34
TTC3-209ENST00000438055 PPBPP02775 128 aa12.9□□□□□ -0.34
TTC3-209ENST00000438055 GNLYP22749 145 aa12.9□□□□□ -0.34
TTC3-209ENST00000438055 RNASE8Q8TDE3 154 aaKnown RBP12.9□□□□□ -0.34
TTC3-209ENST00000438055 TMEM158Q8WZ71 300 aa12.9□□□□□ -0.34
TTC3-209ENST00000438055 LMO4P61968 165 aa12.9□□□□□ -0.34
TTC3-209ENST00000438055 Q6ZQT7 251 aa12.9□□□□□ -0.34
TTC3-209ENST00000438055 PCP2Q8IVA1 136 aa12.9□□□□□ -0.34
TTC3-209ENST00000438055 DEFB125Q8N687 156 aa12.9□□□□□ -0.34
TTC3-209ENST00000438055 LGALS9BQ3B8N2 356 aa12.9□□□□□ -0.34
TTC3-209ENST00000438055 LGALS9CQ6DKI2 356 aa12.9□□□□□ -0.34
TTC3-209ENST00000438055 LCNL1Q6ZST4 164 aa12.9□□□□□ -0.34
TTC3-209ENST00000438055 COL25A1Q9BXS0 654 aaPredicted RBP12.9□□□□□ -0.34
TTC3-209ENST00000438055 TMEM160Q9NX00 188 aa12.89□□□□□ -0.35
TTC3-209ENST00000438055 TRBV7-1A0A0A6YYK4 115 aa12.89□□□□□ -0.35
TTC3-209ENST00000438055 COL12A1Q99715 3063 aa12.89□□□□□ -0.35
TTC3-209ENST00000438055 TTTY13Q9BZ97 58 aa12.89□□□□□ -0.35
TTC3-209ENST00000438055 NXT2Q9NPJ8 142 aaKnown RBP12.89□□□□□ -0.35
TTC3-209ENST00000438055 IGKV3D-20A0A0C4DH25 116 aa12.88□□□□□ -0.35
TTC3-209ENST00000438055 C19orf84I3L1E1 186 aa12.88□□□□□ -0.35
TTC3-209ENST00000438055 SRD5A1P18405 259 aa12.88□□□□□ -0.35
TTC3-209ENST00000438055 GCSHP23434 173 aa12.88□□□□□ -0.35
TTC3-209ENST00000438055 PEF1Q9UBV8 284 aaKnown RBP12.88□□□□□ -0.35
TTC3-209ENST00000438055 MOB4Q9Y3A3 225 aa12.88□□□□□ -0.35
TTC3-209ENST00000438055 A6NDN8 102 aa12.88□□□□□ -0.35
TTC3-209ENST00000438055 CD5LO43866 347 aa12.88□□□□□ -0.35
TTC3-209ENST00000438055 GATD1Q8NB37 220 aa12.88□□□□□ -0.35
TTC3-209ENST00000438055 SORL1Q92673 2214 aa12.88□□□□□ -0.35
TTC3-209ENST00000438055 MGPP08493 103 aa12.88□□□□□ -0.35
TTC3-209ENST00000438055 VPS25Q9BRG1 176 aa12.88□□□□□ -0.35
TTC3-209ENST00000438055 C11orf21Q9P2W6 132 aa12.88□□□□□ -0.35
TTC3-209ENST00000438055 U3KQK5 164 aa12.88□□□□□ -0.35
TTC3-209ENST00000438055 GAGE10A6NGK3 116 aa12.87□□□□□ -0.35
TTC3-209ENST00000438055 PCP4P48539 62 aa12.87□□□□□ -0.35
TTC3-209ENST00000438055 MYOZ3Q8TDC0 251 aa12.87□□□□□ -0.35
TTC3-209ENST00000438055 H3BUT2 72 aa12.87□□□□□ -0.35
TTC3-209ENST00000438055 SMAD7O15105 426 aaKnown RBP12.87□□□□□ -0.35
TTC3-209ENST00000438055 FCER1GP30273 86 aa12.87□□□□□ -0.35
TTC3-209ENST00000438055 GTSCR1Q86UQ5 136 aa12.87□□□□□ -0.35
TTC3-209ENST00000438055 C5orf56Q8N8D9 126 aa12.87□□□□□ -0.35
TTC3-209ENST00000438055 OR10J6PQ8NGY7 276 aa12.87□□□□□ -0.35
TTC3-209ENST00000438055 MYO18BQ8IUG5 2567 aa12.87□□□□□ -0.35
TTC3-209ENST00000438055 CLPSL1A2RUU4 121 aa12.87□□□□□ -0.35
TTC3-209ENST00000438055 RNF185Q96GF1 192 aa12.87□□□□□ -0.35
TTC3-209ENST00000438055 TRBV12-3P01733 135 aa12.86□□□□□ -0.35
TTC3-209ENST00000438055 LINC01559Q495D7 138 aa12.86□□□□□ -0.35
TTC3-209ENST00000438055 C2orf91Q6ZV80 131 aa12.86□□□□□ -0.35
TTC3-209ENST00000438055 OR2K2Q8NGT1 345 aa12.86□□□□□ -0.35
TTC3-209ENST00000438055 DEFB104AQ8WTQ1 72 aa12.86□□□□□ -0.35
TTC3-209ENST00000438055 WFDC12Q8WWY7 111 aa12.86□□□□□ -0.35
TTC3-209ENST00000438055 TRAV8-6A0A0B4J262 113 aa12.86□□□□□ -0.35
TTC3-209ENST00000438055 IGF1P05019 195 aa12.86□□□□□ -0.35
TTC3-209ENST00000438055 H3BUX3 64 aa12.85□□□□□ -0.35
TTC3-209ENST00000438055 SMIM17P0DL12 118 aa12.85□□□□□ -0.35
TTC3-209ENST00000438055 PHLDA3Q9Y5J5 127 aa12.85□□□□□ -0.35
TTC3-209ENST00000438055 IGHV4-39P01824 125 aa12.85□□□□□ -0.35
TTC3-209ENST00000438055 UNQ9165/PRO28630Q6UXU0 137 aa12.85□□□□□ -0.35
TTC3-209ENST00000438055 ARL6IP6Q8N6S5 226 aa12.85□□□□□ -0.35
TTC3-209ENST00000438055 PKD1L2Q7Z442 2459 aa12.84□□□□□ -0.35
TTC3-209ENST00000438055 NOTCH3Q9UM47 2321 aa12.84□□□□□ -0.35
TTC3-209ENST00000438055 TRAV8-2A0A0B4J237 113 aa12.84□□□□□ -0.35
TTC3-209ENST00000438055 F6UB75 175 aa12.84□□□□□ -0.35
TTC3-209ENST00000438055 RNASE4P34096 147 aaKnown RBP12.84□□□□□ -0.35
TTC3-209ENST00000438055 ATP5J2P56134 94 aa12.84□□□□□ -0.35
TTC3-209ENST00000438055 SEC11AP67812 179 aa12.84□□□□□ -0.35
TTC3-209ENST00000438055 ZC2HC1BQ5TFG8 222 aa12.84□□□□□ -0.35
TTC3-209ENST00000438055 OR1N2Q8NGR9 330 aa12.84□□□□□ -0.35
TTC3-209ENST00000438055 POLQO75417 2590 aa12.84□□□□□ -0.35
TTC3-209ENST00000438055 PIMREGQ9BSJ6 248 aa12.83□□□□□ -0.35
TTC3-209ENST00000438055 ITLN2Q8WWU7 325 aaPredicted RBP12.83□□□□□ -0.36
TTC3-209ENST00000438055 IGHV1-69DA0A0B4J2H0 117 aa12.83□□□□□ -0.36
TTC3-209ENST00000438055 IGHV4-61A0A0C4DH41 118 aa12.83□□□□□ -0.36
TTC3-209ENST00000438055 IGHV1-69P01742 117 aa12.83□□□□□ -0.36
TTC3-209ENST00000438055 IGKCP01834 107 aa12.83□□□□□ -0.36
TTC3-209ENST00000438055 KIR3DS1Q14943 382 aa12.83□□□□□ -0.36
TTC3-209ENST00000438055 IGHV4-38-2P0DP08 117 aa12.82□□□□□ -0.36
TTC3-209ENST00000438055 CCL19Q99731 98 aa12.82□□□□□ -0.36
TTC3-209ENST00000438055 RBAKDNA6NC62 111 aa12.82□□□□□ -0.36
TTC3-209ENST00000438055 SFTPCP11686 197 aa12.82□□□□□ -0.36
TTC3-209ENST00000438055 HSD52Q0P140 79 aa12.82□□□□□ -0.36
TTC3-209ENST00000438055 CLEC2AQ6UVW9 174 aa12.82□□□□□ -0.36
TTC3-209ENST00000438055 C14orf178Q8N769 122 aaPredicted RBP12.82□□□□□ -0.36
TTC3-209ENST00000438055 PPP1R14DQ9NXH3 145 aa12.82□□□□□ -0.36
TTC3-209ENST00000438055 OR9G4Q8NGQ1 327 aa12.82□□□□□ -0.36
TTC3-209ENST00000438055 AJUBAQ96IF1 538 aa12.82□□□□□ -0.36
TTC3-209ENST00000438055 USP9XQ93008 2570 aaPredicted RBP12.81□□□□□ -0.36
TTC3-209ENST00000438055 C9orf139Q6ZV77 190 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms