RNA–Protein interactions for RNA: ENST00000409854.5

EPHA4-202, Transcript of EPH receptor A4, humanhuman

TSL 1 (best) BASIC

Gene EPHA4, Length 3,454 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-202ENST00000409854 HOXD3P31249 432 aaPredicted RBP4.19□□□□□ -1.74
EPHA4-202ENST00000409854 ZNF705AQ6ZN79 300 aaPredicted RBP4.19□□□□□ -1.74
EPHA4-202ENST00000409854 C18orf65Q6ZTR6 163 aa4.19□□□□□ -1.74
EPHA4-202ENST00000409854 GOLT1AQ6ZVE7 132 aa4.19□□□□□ -1.74
EPHA4-202ENST00000409854 COX8CQ7Z4L0 72 aa4.19□□□□□ -1.74
EPHA4-202ENST00000409854 BAGE2Q86Y30 109 aa4.19□□□□□ -1.74
EPHA4-202ENST00000409854 RHPN1-AS1Q9BWJ2 59 aa4.19□□□□□ -1.74
EPHA4-202ENST00000409854 ACANP16112 2415 aa4.18□□□□□ -1.74
EPHA4-202ENST00000409854 TRBV24-1A0A075B6N3 115 aa4.18□□□□□ -1.74
EPHA4-202ENST00000409854 K7EQM0 130 aa4.18□□□□□ -1.74
EPHA4-202ENST00000409854 CRLF1O75462 422 aa4.18□□□□□ -1.74
EPHA4-202ENST00000409854 EDN2P20800 178 aa4.18□□□□□ -1.74
EPHA4-202ENST00000409854 HERV-K104P63124 156 aa4.18□□□□□ -1.74
EPHA4-202ENST00000409854 OR10G8Q8NGN5 311 aa4.18□□□□□ -1.74
EPHA4-202ENST00000409854 SIGMAR1Q99720 223 aa4.18□□□□□ -1.74
EPHA4-202ENST00000409854 ZNF492Q9P255 531 aa4.18□□□□□ -1.74
EPHA4-202ENST00000409854 V9GYV3 84 aa4.18□□□□□ -1.74
EPHA4-202ENST00000409854 TLN2Q9Y4G6 2542 aa4.18□□□□□ -1.74
EPHA4-202ENST00000409854 LINC01619G3V211 115 aa4.18□□□□□ -1.74
EPHA4-202ENST00000409854 HLA-DMBP28068 263 aa4.18□□□□□ -1.74
EPHA4-202ENST00000409854 CSN1S1P47710 185 aa4.18□□□□□ -1.74
EPHA4-202ENST00000409854 PROK1P58294 105 aa4.18□□□□□ -1.74
EPHA4-202ENST00000409854 FOXL1Q12952 345 aa4.18□□□□□ -1.74
EPHA4-202ENST00000409854 FHL3Q13643 280 aa4.18□□□□□ -1.74
EPHA4-202ENST00000409854 TRAV8-1A0A0A6YYK1 113 aa4.18□□□□□ -1.74
EPHA4-202ENST00000409854 C19orf71A6NCJ1 209 aa4.18□□□□□ -1.74
EPHA4-202ENST00000409854 CXCL1P09341 107 aa4.18□□□□□ -1.74
EPHA4-202ENST00000409854 LCN12Q6JVE5 192 aa4.18□□□□□ -1.74
EPHA4-202ENST00000409854 NRN1Q9NPD7 142 aa4.18□□□□□ -1.74
EPHA4-202ENST00000409854 PSG8Q9UQ74 426 aa4.18□□□□□ -1.74
EPHA4-202ENST00000409854 SONP18583 2426 aaKnown RBP4.17□□□□□ -1.74
EPHA4-202ENST00000409854 TRAV9-1A0A075B6T8 112 aa4.17□□□□□ -1.74
EPHA4-202ENST00000409854 C2orf70A6NJV1 201 aa4.17□□□□□ -1.74
EPHA4-202ENST00000409854 ZNF705GA8MUZ8 300 aaPredicted RBP4.17□□□□□ -1.74
EPHA4-202ENST00000409854 PRB4P10163 310 aaPredicted RBP4.17□□□□□ -1.74
EPHA4-202ENST00000409854 CD28P10747 220 aa4.17□□□□□ -1.74
EPHA4-202ENST00000409854 SYNJ2BPP57105 145 aa4.17□□□□□ -1.74
EPHA4-202ENST00000409854 IBA57Q5T440 356 aaKnown RBP4.17□□□□□ -1.74
EPHA4-202ENST00000409854 Q71RC1 249 aaPredicted RBP4.17□□□□□ -1.74
EPHA4-202ENST00000409854 KLHL30-AS1Q8NEE0 82 aa4.17□□□□□ -1.74
EPHA4-202ENST00000409854 OR1N2Q8NGR9 330 aa4.17□□□□□ -1.74
EPHA4-202ENST00000409854 IL36BQ9NZH7 164 aa4.17□□□□□ -1.74
EPHA4-202ENST00000409854 MRPS16Q9Y3D3 137 aaKnown RBP4.17□□□□□ -1.74
EPHA4-202ENST00000409854 NPIPB6E9PJ23 425 aa4.17□□□□□ -1.74
EPHA4-202ENST00000409854 SAP30O75446 220 aa4.17□□□□□ -1.74
EPHA4-202ENST00000409854 MGST1P10620 155 aaKnown RBP4.17□□□□□ -1.74
EPHA4-202ENST00000409854 ESDP10768 282 aa4.17□□□□□ -1.74
EPHA4-202ENST00000409854 SLURP1P55000 103 aa4.17□□□□□ -1.74
EPHA4-202ENST00000409854 DEFB136Q30KP8 78 aa4.17□□□□□ -1.74
EPHA4-202ENST00000409854 IGFL4Q6B9Z1 124 aa4.17□□□□□ -1.74
EPHA4-202ENST00000409854 ADAMTSL5Q6ZMM2 481 aa4.17□□□□□ -1.74
EPHA4-202ENST00000409854 RNF182Q8N6D2 247 aa4.17□□□□□ -1.74
EPHA4-202ENST00000409854 SGK494Q96LW2 274 aa4.17□□□□□ -1.74
EPHA4-202ENST00000409854 RNASE7Q9H1E1 156 aaKnown RBP4.17□□□□□ -1.74
EPHA4-202ENST00000409854 GEMIN7Q9H840 131 aaKnown RBP4.17□□□□□ -1.74
EPHA4-202ENST00000409854 TSSC4Q9Y5U2 329 aaPredicted RBP4.17□□□□□ -1.74
EPHA4-202ENST00000409854 SETD2Q9BYW2 2564 aaPredicted RBP4.17□□□□□ -1.74
EPHA4-202ENST00000409854 IGKV2-40A0A087WW87 121 aaPredicted RBP4.16□□□□□ -1.74
EPHA4-202ENST00000409854 ZNF705FA8MVS1 300 aaPredicted RBP4.16□□□□□ -1.74
EPHA4-202ENST00000409854 IGKV2D-40P01614 121 aaPredicted RBP4.16□□□□□ -1.74
EPHA4-202ENST00000409854 TYMSP04818 313 aa4.16□□□□□ -1.74
EPHA4-202ENST00000409854 CBLN1P23435 193 aa4.16□□□□□ -1.74
EPHA4-202ENST00000409854 KCNIP4Q6PIL6 250 aa4.16□□□□□ -1.74
EPHA4-202ENST00000409854 LINC00322Q6ZN03 302 aaPredicted RBP4.16□□□□□ -1.74
EPHA4-202ENST00000409854 TEX43Q6ZNM6 134 aa4.16□□□□□ -1.74
EPHA4-202ENST00000409854 PRNTQ86SH4 94 aa4.16□□□□□ -1.74
EPHA4-202ENST00000409854 OR4B1Q8NGF8 309 aa4.16□□□□□ -1.74
EPHA4-202ENST00000409854 DCANP1Q8TF63 244 aa4.16□□□□□ -1.74
EPHA4-202ENST00000409854 C20orf173Q96LM9 149 aa4.16□□□□□ -1.74
EPHA4-202ENST00000409854 RNF114Q9Y508 228 aa4.16□□□□□ -1.74
EPHA4-202ENST00000409854 SMIM27A0A1W2PRY6 76 aa4.16□□□□□ -1.74
EPHA4-202ENST00000409854 ADARB2-AS1A8MUL3 147 aa4.16□□□□□ -1.74
EPHA4-202ENST00000409854 PRAC2D3DTV9 90 aa4.16□□□□□ -1.74
EPHA4-202ENST00000409854 CT83Q5H943 113 aa4.16□□□□□ -1.74
EPHA4-202ENST00000409854 C9orf47Q6ZRZ4 202 aa4.16□□□□□ -1.74
EPHA4-202ENST00000409854 ZC2HC1AQ96GY0 325 aa4.16□□□□□ -1.74
EPHA4-202ENST00000409854 BTF3L4Q96K17 158 aa4.16□□□□□ -1.74
EPHA4-202ENST00000409854 C16orf92Q96LL3 132 aa4.16□□□□□ -1.74
EPHA4-202ENST00000409854 VGLL1Q99990 258 aa4.16□□□□□ -1.74
EPHA4-202ENST00000409854 OR9G4Q8NGQ1 327 aa4.16□□□□□ -1.74
EPHA4-202ENST00000409854 PRR25Q96S07 402 aa4.16□□□□□ -1.74
EPHA4-202ENST00000409854 SPANXCQ9NY87 97 aa4.16□□□□□ -1.74
EPHA4-202ENST00000409854 PEMTQ9UBM1 199 aa4.16□□□□□ -1.74
EPHA4-202ENST00000409854 UQCR10Q9UDW1 63 aa4.16□□□□□ -1.74
EPHA4-202ENST00000409854 M0QZ24 198 aa4.15□□□□□ -1.74
EPHA4-202ENST00000409854 CSN3P07498 182 aa4.15□□□□□ -1.74
EPHA4-202ENST00000409854 KHDC1LQ5JSQ8 128 aa4.15□□□□□ -1.74
EPHA4-202ENST00000409854 DLX4Q92988 240 aaPredicted RBP4.15□□□□□ -1.74
EPHA4-202ENST00000409854 PTH2Q96A98 100 aa4.15□□□□□ -1.74
EPHA4-202ENST00000409854 DAZAP1Q96EP5 407 aaKnown RBP4.15□□□□□ -1.74
EPHA4-202ENST00000409854 C8orf49Q96NF6 230 aa4.15□□□□□ -1.74
EPHA4-202ENST00000409854 HIVEP2P31629 2446 aa4.15□□□□□ -1.74
EPHA4-202ENST00000409854 NSD1Q96L73 2696 aaPredicted RBP4.15□□□□□ -1.74
EPHA4-202ENST00000409854 HIVEP1P15822 2718 aa4.15□□□□□ -1.74
EPHA4-202ENST00000409854 TRAV2A0A0B4J234 112 aa4.15□□□□□ -1.75
EPHA4-202ENST00000409854 K7EQG2 157 aa4.15□□□□□ -1.75
EPHA4-202ENST00000409854 OVOL1O14753 267 aa4.15□□□□□ -1.75
EPHA4-202ENST00000409854 TRGC1P0CF51 173 aa4.15□□□□□ -1.75
EPHA4-202ENST00000409854 CRIP1P50238 77 aa4.15□□□□□ -1.75
EPHA4-202ENST00000409854 MS4A6AQ9H2W1 248 aa4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms