RNA–Protein interactions for RNA: ENST00000409416.5

COL6A2-204, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,430 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-204ENST00000409416 HIST2H2BCQ6DN03 193 aa10.47□□□□□ -0.73
COL6A2-204ENST00000409416 CCL19Q99731 98 aa10.47□□□□□ -0.73
COL6A2-204ENST00000409416 HIST1H1AQ02539 215 aaPredicted RBP10.46□□□□□ -0.73
COL6A2-204ENST00000409416 LOXL1Q08397 574 aaPredicted RBP10.46□□□□□ -0.73
COL6A2-204ENST00000409416 PSG3Q16557 428 aa10.46□□□□□ -0.73
COL6A2-204ENST00000409416 IL17RELQ6ZVW7 336 aa10.46□□□□□ -0.73
COL6A2-204ENST00000409416 TNFRSF13BO14836 293 aaPredicted RBP10.46□□□□□ -0.73
COL6A2-204ENST00000409416 IGLV2-11P01706 119 aa10.46□□□□□ -0.73
COL6A2-204ENST00000409416 BLCAPP62952 87 aa10.46□□□□□ -0.73
COL6A2-204ENST00000409416 FAM74A4Q5TZK3 123 aa10.46□□□□□ -0.74
COL6A2-204ENST00000409416 CFAP161Q6P656 301 aa10.46□□□□□ -0.74
COL6A2-204ENST00000409416 OR10AG1Q8NH19 301 aa10.46□□□□□ -0.74
COL6A2-204ENST00000409416 NDFIP1Q9BT67 221 aa10.46□□□□□ -0.74
COL6A2-204ENST00000409416 TGFAP01135 160 aa10.45□□□□□ -0.74
COL6A2-204ENST00000409416 CRYGBP07316 175 aa10.45□□□□□ -0.74
COL6A2-204ENST00000409416 SPANXN1Q5VSR9 72 aa10.45□□□□□ -0.74
COL6A2-204ENST00000409416 CCDC144NLQ6NUI1 221 aa10.45□□□□□ -0.74
COL6A2-204ENST00000409416 SIGLEC15Q6ZMC9 328 aa10.45□□□□□ -0.74
COL6A2-204ENST00000409416 PRELID3AQ96N28 172 aa10.45□□□□□ -0.74
COL6A2-204ENST00000409416 DUX3Q96PT4 197 aa10.45□□□□□ -0.74
COL6A2-204ENST00000409416 TRBV12-3P01733 135 aa10.45□□□□□ -0.74
COL6A2-204ENST00000409416 IGHV4-38-2P0DP08 117 aa10.45□□□□□ -0.74
COL6A2-204ENST00000409416 PRTN3P24158 256 aa10.45□□□□□ -0.74
COL6A2-204ENST00000409416 CT83Q5H943 113 aa10.45□□□□□ -0.74
COL6A2-204ENST00000409416 C8orf31Q8N9H6 132 aa10.45□□□□□ -0.74
COL6A2-204ENST00000409416 PAX2Q02962 417 aa10.45□□□□□ -0.74
COL6A2-204ENST00000409416 SFTA2Q6UW10 78 aa10.45□□□□□ -0.74
COL6A2-204ENST00000409416 ST20Q9HBF5 79 aa10.45□□□□□ -0.74
COL6A2-204ENST00000409416 HAX1O00165 279 aa10.44□□□□□ -0.74
COL6A2-204ENST00000409416 SH2D1AO60880 128 aa10.44□□□□□ -0.74
COL6A2-204ENST00000409416 CRIP1P50238 77 aa10.44□□□□□ -0.74
COL6A2-204ENST00000409416 CACNG7P62955 275 aa10.44□□□□□ -0.74
COL6A2-204ENST00000409416 PRSS57Q6UWY2 283 aa10.44□□□□□ -0.74
COL6A2-204ENST00000409416 FER1L6-AS1Q8NA97 138 aa10.44□□□□□ -0.74
COL6A2-204ENST00000409416 C1RLQ9NZP8 487 aa10.44□□□□□ -0.74
COL6A2-204ENST00000409416 IGHV4-61A0A0C4DH41 118 aa10.44□□□□□ -0.74
COL6A2-204ENST00000409416 H3BRN7 92 aa10.44□□□□□ -0.74
COL6A2-204ENST00000409416 ZNF414Q96IQ9 312 aa10.44□□□□□ -0.74
COL6A2-204ENST00000409416 GFRA4Q9GZZ7 299 aa10.44□□□□□ -0.74
COL6A2-204ENST00000409416 AZU1P20160 251 aa10.43□□□□□ -0.74
COL6A2-204ENST00000409416 RAB9AP51151 201 aa10.43□□□□□ -0.74
COL6A2-204ENST00000409416 TTTY13Q9BZ97 58 aa10.43□□□□□ -0.74
COL6A2-204ENST00000409416 TEP1Q99973 2627 aaKnown RBP10.43□□□□□ -0.74
COL6A2-204ENST00000409416 TRAV26-1A0A087WT03 109 aa10.43□□□□□ -0.74
COL6A2-204ENST00000409416 H3BUT2 72 aa10.43□□□□□ -0.74
COL6A2-204ENST00000409416 SCGB2A1O75556 95 aa10.43□□□□□ -0.74
COL6A2-204ENST00000409416 HOXB4P17483 251 aaPredicted RBP10.43□□□□□ -0.74
COL6A2-204ENST00000409416 UCNP55089 124 aa10.43□□□□□ -0.74
COL6A2-204ENST00000409416 PVRIGQ6DKI7 326 aa10.43□□□□□ -0.74
COL6A2-204ENST00000409416 PIP4P2Q8N4L2 257 aa10.43□□□□□ -0.74
COL6A2-204ENST00000409416 A0A1W2PRX2 142 aa10.43□□□□□ -0.74
COL6A2-204ENST00000409416 CKS1BP61024 79 aa10.43□□□□□ -0.74
COL6A2-204ENST00000409416 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.43□□□□□ -0.74
COL6A2-204ENST00000409416 NEU4Q8WWR8 484 aaPredicted RBP10.43□□□□□ -0.74
COL6A2-204ENST00000409416 C7orf71A4D174 169 aa10.42□□□□□ -0.74
COL6A2-204ENST00000409416 H3BVH4 76 aa10.42□□□□□ -0.74
COL6A2-204ENST00000409416 EMP1P54849 157 aa10.42□□□□□ -0.74
COL6A2-204ENST00000409416 C10orf99Q6UWK7 81 aa10.42□□□□□ -0.74
COL6A2-204ENST00000409416 Q6ZS46 218 aa10.42□□□□□ -0.74
COL6A2-204ENST00000409416 NEGR1Q7Z3B1 354 aa10.42□□□□□ -0.74
COL6A2-204ENST00000409416 TMEM14CQ9P0S9 112 aa10.42□□□□□ -0.74
COL6A2-204ENST00000409416 IGF1P05019 195 aa10.42□□□□□ -0.74
COL6A2-204ENST00000409416 RPL7P18124 248 aaKnown RBP10.42□□□□□ -0.74
COL6A2-204ENST00000409416 PET117Q6UWS5 81 aa10.42□□□□□ -0.74
COL6A2-204ENST00000409416 IGHV3OR16-12A0A075B7B8 117 aa10.42□□□□□ -0.74
COL6A2-204ENST00000409416 IGHV7-81A0A0B4J1V7 117 aa10.42□□□□□ -0.74
COL6A2-204ENST00000409416 TRAV8-6A0A0B4J262 113 aa10.42□□□□□ -0.74
COL6A2-204ENST00000409416 FOXE3Q13461 319 aa10.42□□□□□ -0.74
COL6A2-204ENST00000409416 TMEM78Q5T7P6 136 aa10.42□□□□□ -0.74
COL6A2-204ENST00000409416 IGF2-ASQ6U949 168 aa10.42□□□□□ -0.74
COL6A2-204ENST00000409416 GAS8-AS1O95177 125 aa10.41□□□□□ -0.74
COL6A2-204ENST00000409416 BVES-AS1Q5T3Y7 98 aa10.41□□□□□ -0.74
COL6A2-204ENST00000409416 FANCD2OSQ96PS1 177 aa10.41□□□□□ -0.74
COL6A2-204ENST00000409416 SIGLEC8Q9NYZ4 499 aa10.41□□□□□ -0.74
COL6A2-204ENST00000409416 NBEAL2Q6ZNJ1 2754 aa10.41□□□□□ -0.74
COL6A2-204ENST00000409416 VPS13CQ709C8 3753 aa10.41□□□□□ -0.74
COL6A2-204ENST00000409416 ATP5G2Q06055 141 aa10.41□□□□□ -0.74
COL6A2-204ENST00000409416 C12orf54Q6X4T0 127 aa10.41□□□□□ -0.74
COL6A2-204ENST00000409416 ORMDL3Q8N138 153 aa10.41□□□□□ -0.74
COL6A2-204ENST00000409416 RNASE4P34096 147 aaKnown RBP10.4□□□□□ -0.74
COL6A2-204ENST00000409416 KIR3DS1Q14943 382 aa10.4□□□□□ -0.74
COL6A2-204ENST00000409416 METTL26Q96S19 204 aa10.4□□□□□ -0.74
COL6A2-204ENST00000409416 JKAMPQ9P055 326 aa10.4□□□□□ -0.74
COL6A2-204ENST00000409416 NPFFO15130 113 aa10.4□□□□□ -0.74
COL6A2-204ENST00000409416 ZNF562Q6V9R5 426 aa10.4□□□□□ -0.74
COL6A2-204ENST00000409416 SIGMAR1Q99720 223 aa10.4□□□□□ -0.74
COL6A2-204ENST00000409416 ZNF747Q9BV97 191 aa10.4□□□□□ -0.74
COL6A2-204ENST00000409416 IGHV4-30-2A0A087WSY4 118 aa10.4□□□□□ -0.75
COL6A2-204ENST00000409416 EDN2P20800 178 aa10.4□□□□□ -0.75
COL6A2-204ENST00000409416 ZNF80P51504 273 aaPredicted RBP10.4□□□□□ -0.75
COL6A2-204ENST00000409416 EFNA4P52798 201 aa10.4□□□□□ -0.75
COL6A2-204ENST00000409416 CRYBA4P53673 196 aa10.4□□□□□ -0.75
COL6A2-204ENST00000409416 PEF1Q9UBV8 284 aaKnown RBP10.4□□□□□ -0.75
COL6A2-204ENST00000409416 NPIPB6E9PJ23 425 aa10.39□□□□□ -0.75
COL6A2-204ENST00000409416 OVOL3O00110 214 aa10.39□□□□□ -0.75
COL6A2-204ENST00000409416 IGHV4-39P01824 125 aa10.39□□□□□ -0.75
COL6A2-204ENST00000409416 EGR2P11161 476 aaPredicted RBP10.39□□□□□ -0.75
COL6A2-204ENST00000409416 FAM231BA6NCW3 169 aa10.39□□□□□ -0.75
COL6A2-204ENST00000409416 TAX1BP3O14907 124 aa10.39□□□□□ -0.75
COL6A2-204ENST00000409416 NPYP01303 97 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 154.8 ms