RNA–Protein interactions for RNA: ENST00000211998.9

VCL-201, Transcript of vinculin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VCL, Length 5,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-201ENST00000211998 CRLF1O75462 422 aa8.31□□□□□ -1.08
VCL-201ENST00000211998 FRMD6-AS1P0C7T7 363 aa8.31□□□□□ -1.08
VCL-201ENST00000211998 PFN2P35080 140 aa8.31□□□□□ -1.08
VCL-201ENST00000211998 SUMO4Q6EEV6 95 aa8.31□□□□□ -1.08
VCL-201ENST00000211998 RNF166Q96A37 237 aaPredicted RBP8.31□□□□□ -1.08
VCL-201ENST00000211998 KIAA2026Q5HYC2 2103 aa8.31□□□□□ -1.08
VCL-201ENST00000211998 MED12Q93074 2177 aa8.31□□□□□ -1.08
VCL-201ENST00000211998 DENND4AQ7Z401 1863 aa8.31□□□□□ -1.08
VCL-201ENST00000211998 TRAV13-2A0A0B4J235 113 aa8.31□□□□□ -1.08
VCL-201ENST00000211998 IGHV3-53P01767 116 aa8.31□□□□□ -1.08
VCL-201ENST00000211998 GATA3P23771 443 aa8.31□□□□□ -1.08
VCL-201ENST00000211998 HEATR1Q9H583 2144 aaKnown RBP8.31□□□□□ -1.08
VCL-201ENST00000211998 TMEM14CQ9P0S9 112 aa8.31□□□□□ -1.08
VCL-201ENST00000211998 ZNRD1Q9P1U0 126 aa8.31□□□□□ -1.08
VCL-201ENST00000211998 ZDBF2Q9HCK1 2354 aa8.31□□□□□ -1.08
VCL-201ENST00000211998 CEP290O15078 2479 aa8.31□□□□□ -1.08
VCL-201ENST00000211998 DKK1O94907 266 aa8.3□□□□□ -1.08
VCL-201ENST00000211998 PRB1P04280 392 aa8.3□□□□□ -1.08
VCL-201ENST00000211998 C11orf44Q8N8P7 122 aa8.3□□□□□ -1.08
VCL-201ENST00000211998 DSCR8Q96T75 97 aa8.3□□□□□ -1.08
VCL-201ENST00000211998 DOCK8Q8NF50 2099 aa8.3□□□□□ -1.08
VCL-201ENST00000211998 TRGV1A0A0A0MS02 117 aa8.3□□□□□ -1.08
VCL-201ENST00000211998 RNF114Q9Y508 228 aa8.3□□□□□ -1.08
VCL-201ENST00000211998 A4D1N5 150 aa8.3□□□□□ -1.08
VCL-201ENST00000211998 DIDO1Q9BTC0 2240 aaKnown RBP8.3□□□□□ -1.08
VCL-201ENST00000211998 PIP4P2Q8N4L2 257 aa8.29□□□□□ -1.08
VCL-201ENST00000211998 THADAQ6YHU6 1953 aa8.29□□□□□ -1.08
VCL-201ENST00000211998 SCN5AQ14524 2016 aa8.29□□□□□ -1.08
VCL-201ENST00000211998 GATA1P15976 413 aaPredicted RBP8.29□□□□□ -1.08
VCL-201ENST00000211998 UBE2DNLQ8IWF7 75 aa8.29□□□□□ -1.08
VCL-201ENST00000211998 SPANXB1Q9NS25 103 aaPredicted RBP8.29□□□□□ -1.08
VCL-201ENST00000211998 ICOSQ9Y6W8 199 aa8.29□□□□□ -1.08
VCL-201ENST00000211998 LMO1P25800 156 aa8.29□□□□□ -1.08
VCL-201ENST00000211998 BRD3OSQ6XYD6 125 aa8.29□□□□□ -1.08
VCL-201ENST00000211998 MUSTN1Q8IVN3 82 aa8.29□□□□□ -1.08
VCL-201ENST00000211998 KLHL30-AS1Q8NEE0 82 aa8.29□□□□□ -1.08
VCL-201ENST00000211998 SDK2Q58EX2 2172 aa8.28□□□□□ -1.08
VCL-201ENST00000211998 RPL32P62910 135 aaKnown RBP8.28□□□□□ -1.08
VCL-201ENST00000211998 CEP250Q9BV73 2442 aa8.28□□□□□ -1.08
VCL-201ENST00000211998 H3BRN7 92 aa8.28□□□□□ -1.08
VCL-201ENST00000211998 IGHG2P01859 326 aa8.28□□□□□ -1.08
VCL-201ENST00000211998 C2orf70A6NJV1 201 aa8.27□□□□□ -1.08
VCL-201ENST00000211998 F8WEM9 126 aa8.27□□□□□ -1.08
VCL-201ENST00000211998 SBF1O95248 1867 aa8.27□□□□□ -1.09
VCL-201ENST00000211998 MYLKQ15746 1914 aa8.27□□□□□ -1.09
VCL-201ENST00000211998 TRBV10-2A0A0K0K1G8 114 aa8.27□□□□□ -1.09
VCL-201ENST00000211998 IGF2BP2-AS1Q96M15 143 aa8.27□□□□□ -1.09
VCL-201ENST00000211998 K7ENP7 123 aa8.27□□□□□ -1.09
VCL-201ENST00000211998 COL8A2P25067 703 aa8.27□□□□□ -1.09
VCL-201ENST00000211998 DAZ1Q9NQZ3 744 aaKnown RBP8.27□□□□□ -1.09
VCL-201ENST00000211998 K7EM74 188 aa8.27□□□□□ -1.09
VCL-201ENST00000211998 WT1-ASQ06250 92 aa8.27□□□□□ -1.09
VCL-201ENST00000211998 BPESC1Q9GZL8 116 aa8.26□□□□□ -1.09
VCL-201ENST00000211998 PHF3Q92576 2039 aaKnown RBP8.26□□□□□ -1.09
VCL-201ENST00000211998 F6UB75 175 aa8.26□□□□□ -1.09
VCL-201ENST00000211998 EGR2P11161 476 aaPredicted RBP8.26□□□□□ -1.09
VCL-201ENST00000211998 PSMB8P28062 276 aa8.26□□□□□ -1.09
VCL-201ENST00000211998 Q6ZR03 302 aa8.26□□□□□ -1.09
VCL-201ENST00000211998 THAP8Q8NA92 274 aa8.26□□□□□ -1.09
VCL-201ENST00000211998 TP73-AS1Q9UF72 201 aa8.26□□□□□ -1.09
VCL-201ENST00000211998 PKIGQ9Y2B9 76 aa8.26□□□□□ -1.09
VCL-201ENST00000211998 E7EQL1 145 aa8.26□□□□□ -1.09
VCL-201ENST00000211998 WISP1O95388 367 aa8.26□□□□□ -1.09
VCL-201ENST00000211998 SAA4P35542 130 aa8.26□□□□□ -1.09
VCL-201ENST00000211998 NBL1P41271 181 aa8.26□□□□□ -1.09
VCL-201ENST00000211998 RNASE13Q5GAN3 156 aaKnown RBP8.26□□□□□ -1.09
VCL-201ENST00000211998 Q8TCH9 128 aa8.26□□□□□ -1.09
VCL-201ENST00000211998 RHPN1-AS1Q9BWJ2 59 aa8.26□□□□□ -1.09
VCL-201ENST00000211998 HEATR5AQ86XA9 2040 aa8.26□□□□□ -1.09
VCL-201ENST00000211998 CRYGBP07316 175 aa8.26□□□□□ -1.09
VCL-201ENST00000211998 UBE2E1P51965 193 aa8.26□□□□□ -1.09
VCL-201ENST00000211998 LYPD2Q6UXB3 125 aa8.26□□□□□ -1.09
VCL-201ENST00000211998 ETV2O00321 342 aaPredicted RBP8.26□□□□□ -1.09
VCL-201ENST00000211998 TNRC6AQ8NDV7 1962 aaKnown RBP8.25□□□□□ -1.09
VCL-201ENST00000211998 SS18Q15532 418 aa8.25□□□□□ -1.09
VCL-201ENST00000211998 IGFL3Q6UXB1 125 aa8.25□□□□□ -1.09
VCL-201ENST00000211998 C17orf77Q96MU5 243 aa8.25□□□□□ -1.09
VCL-201ENST00000211998 ORMDL1Q9P0S3 153 aa8.25□□□□□ -1.09
VCL-201ENST00000211998 ZSWIM8A7E2V4 1837 aa8.25□□□□□ -1.09
VCL-201ENST00000211998 TRAV25A0A0B4J276 109 aa8.25□□□□□ -1.09
VCL-201ENST00000211998 NXPH4O95158 308 aa8.25□□□□□ -1.09
VCL-201ENST00000211998 MSMBP08118 114 aa8.25□□□□□ -1.09
VCL-201ENST00000211998 FAM110DQ8TAY7 271 aaPredicted RBP8.25□□□□□ -1.09
VCL-201ENST00000211998 THSD7BQ9C0I4 1608 aa8.25□□□□□ -1.09
VCL-201ENST00000211998 SIP14410 1827 aa8.25□□□□□ -1.09
VCL-201ENST00000211998 GATA4P43694 442 aa8.25□□□□□ -1.09
VCL-201ENST00000211998 GTSF1Q8WW33 167 aa8.25□□□□□ -1.09
VCL-201ENST00000211998 CDK2AP2O75956 126 aa8.24□□□□□ -1.09
VCL-201ENST00000211998 ATP5G1P05496 136 aa8.24□□□□□ -1.09
VCL-201ENST00000211998 ZNF524Q96C55 264 aa8.24□□□□□ -1.09
VCL-201ENST00000211998 AKAP6Q13023 2319 aa8.24□□□□□ -1.09
VCL-201ENST00000211998 V9GYY9 64 aa8.24□□□□□ -1.09
VCL-201ENST00000211998 CACNA1EQ15878 2313 aa8.24□□□□□ -1.09
VCL-201ENST00000211998 IGHV3-38A0A0C4DH36 116 aa8.24□□□□□ -1.09
VCL-201ENST00000211998 UQCRQO14949 82 aa8.24□□□□□ -1.09
VCL-201ENST00000211998 TCL1BO95988 128 aa8.24□□□□□ -1.09
VCL-201ENST00000211998 A0A0U1RQV1 116 aa8.23□□□□□ -1.09
VCL-201ENST00000211998 RHODO00212 210 aa8.23□□□□□ -1.09
VCL-201ENST00000211998 PRB2P02812 416 aaPredicted RBP8.23□□□□□ -1.09
VCL-201ENST00000211998 RPL35AP18077 110 aaKnown RBP8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 193 ms