RNA–Protein interactions for RNA: ENST00000575882.5

TOM1L1-221, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TOM1L1, Length 2,507 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-221ENST00000575882 VPS25Q9BRG1 176 aa13.37□□□□□ -0.27
TOM1L1-221ENST00000575882 H3BRM9 83 aa13.37□□□□□ -0.27
TOM1L1-221ENST00000575882 CCDC144NLQ6NUI1 221 aa13.37□□□□□ -0.27
TOM1L1-221ENST00000575882 VMO1Q7Z5L0 202 aa13.37□□□□□ -0.27
TOM1L1-221ENST00000575882 PCP2Q8IVA1 136 aa13.37□□□□□ -0.27
TOM1L1-221ENST00000575882 AP1S3Q96PC3 154 aa13.37□□□□□ -0.27
TOM1L1-221ENST00000575882 MAP1LC3AQ9H492 121 aa13.37□□□□□ -0.27
TOM1L1-221ENST00000575882 C9orf118A6NHY6 69 aa13.36□□□□□ -0.27
TOM1L1-221ENST00000575882 GAS8-AS1O95177 125 aa13.36□□□□□ -0.27
TOM1L1-221ENST00000575882 ERCC8Q13216 396 aa13.36□□□□□ -0.27
TOM1L1-221ENST00000575882 ADAMTSL5Q6ZMM2 481 aa13.36□□□□□ -0.27
TOM1L1-221ENST00000575882 Q8N6K4 173 aa13.36□□□□□ -0.27
TOM1L1-221ENST00000575882 SIVA1O15304 175 aa13.36□□□□□ -0.27
TOM1L1-221ENST00000575882 JMJD8Q96S16 334 aa13.36□□□□□ -0.27
TOM1L1-221ENST00000575882 CHTOPQ9Y3Y2 248 aaKnown RBP13.36□□□□□ -0.27
TOM1L1-221ENST00000575882 ZFHX2Q9C0A1 2572 aaPredicted RBP13.35□□□□□ -0.27
TOM1L1-221ENST00000575882 FABP5P3A8MUU1 101 aa13.35□□□□□ -0.27
TOM1L1-221ENST00000575882 SRSF2Q01130 221 aaKnown RBP13.35□□□□□ -0.27
TOM1L1-221ENST00000575882 KIR3DS1Q14943 382 aa13.35□□□□□ -0.27
TOM1L1-221ENST00000575882 H3BUT2 72 aa13.35□□□□□ -0.27
TOM1L1-221ENST00000575882 OR4X2Q8NGF9 303 aa13.35□□□□□ -0.27
TOM1L1-221ENST00000575882 PSMG3-AS1Q96PY0 264 aa13.35□□□□□ -0.27
TOM1L1-221ENST00000575882 NAA38Q9BRA0 125 aaKnown RBP13.35□□□□□ -0.27
TOM1L1-221ENST00000575882 CNFNQ9BYD5 112 aa13.35□□□□□ -0.27
TOM1L1-221ENST00000575882 IGHV7-81A0A0B4J1V7 117 aa13.34□□□□□ -0.27
TOM1L1-221ENST00000575882 PRAC2D3DTV9 90 aa13.34□□□□□ -0.27
TOM1L1-221ENST00000575882 LEPP41159 167 aa13.34□□□□□ -0.27
TOM1L1-221ENST00000575882 NPFFR1Q9GZQ6 430 aa13.34□□□□□ -0.27
TOM1L1-221ENST00000575882 DCHS2Q6V1P9 2916 aa13.34□□□□□ -0.27
TOM1L1-221ENST00000575882 EVI2AP22794 236 aa13.34□□□□□ -0.27
TOM1L1-221ENST00000575882 PPIFP30405 207 aaKnown RBP13.34□□□□□ -0.27
TOM1L1-221ENST00000575882 UFSP1Q6NVU6 142 aa13.34□□□□□ -0.27
TOM1L1-221ENST00000575882 GTF2H5Q6ZYL4 71 aa13.34□□□□□ -0.27
TOM1L1-221ENST00000575882 COL25A1Q9BXS0 654 aaPredicted RBP13.34□□□□□ -0.27
TOM1L1-221ENST00000575882 LRBAP50851 2863 aa13.34□□□□□ -0.27
TOM1L1-221ENST00000575882 TNFRSF6BO95407 300 aa13.33□□□□□ -0.28
TOM1L1-221ENST00000575882 FBXL19-AS1Q494R0 122 aa13.33□□□□□ -0.28
TOM1L1-221ENST00000575882 RNF182Q8N6D2 247 aa13.33□□□□□ -0.28
TOM1L1-221ENST00000575882 SVIPQ8NHG7 77 aa13.33□□□□□ -0.28
TOM1L1-221ENST00000575882 ANKHD1Q8IWZ3 2542 aaKnown RBP13.33□□□□□ -0.28
TOM1L1-221ENST00000575882 S100A7P31151 101 aa13.33□□□□□ -0.28
TOM1L1-221ENST00000575882 CSMD1Q96PZ7 3565 aa13.32□□□□□ -0.28
TOM1L1-221ENST00000575882 A0A0G2JLM5 398 aa13.32□□□□□ -0.28
TOM1L1-221ENST00000575882 LINC01546A6NGU7 62 aa13.32□□□□□ -0.28
TOM1L1-221ENST00000575882 EBI3Q14213 229 aa13.32□□□□□ -0.28
TOM1L1-221ENST00000575882 LINC01559Q495D7 138 aa13.32□□□□□ -0.28
TOM1L1-221ENST00000575882 RAB37Q96AX2 223 aa13.32□□□□□ -0.28
TOM1L1-221ENST00000575882 ABCA4P78363 2273 aa13.32□□□□□ -0.28
TOM1L1-221ENST00000575882 K7ERU9 68 aa13.32□□□□□ -0.28
TOM1L1-221ENST00000575882 FCER1GP30273 86 aa13.32□□□□□ -0.28
TOM1L1-221ENST00000575882 C15orf32Q32M92 178 aa13.32□□□□□ -0.28
TOM1L1-221ENST00000575882 IL17RELQ6ZVW7 336 aa13.32□□□□□ -0.28
TOM1L1-221ENST00000575882 NXT2Q9NPJ8 142 aaKnown RBP13.32□□□□□ -0.28
TOM1L1-221ENST00000575882 SELENOKQ9Y6D0 94 aa13.32□□□□□ -0.28
TOM1L1-221ENST00000575882 OOSP1A8MZH6 123 aa13.31□□□□□ -0.28
TOM1L1-221ENST00000575882 GATA1P15976 413 aaPredicted RBP13.31□□□□□ -0.28
TOM1L1-221ENST00000575882 IGHV3-66A0A0C4DH42 116 aa13.31□□□□□ -0.28
TOM1L1-221ENST00000575882 ODF1Q14990 250 aa13.31□□□□□ -0.28
TOM1L1-221ENST00000575882 CDSNQ15517 529 aa13.31□□□□□ -0.28
TOM1L1-221ENST00000575882 CLEC2AQ6UVW9 174 aa13.31□□□□□ -0.28
TOM1L1-221ENST00000575882 Q8N9W7 124 aa13.31□□□□□ -0.28
TOM1L1-221ENST00000575882 ZNF502Q8TBZ5 544 aa13.31□□□□□ -0.28
TOM1L1-221ENST00000575882 MSRB2Q9Y3D2 182 aa13.31□□□□□ -0.28
TOM1L1-221ENST00000575882 K7EP34 96 aa13.3□□□□□ -0.28
TOM1L1-221ENST00000575882 ECSCRQ19T08 205 aa13.3□□□□□ -0.28
TOM1L1-221ENST00000575882 MINOS1Q5TGZ0 78 aa13.3□□□□□ -0.28
TOM1L1-221ENST00000575882 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.3□□□□□ -0.28
TOM1L1-221ENST00000575882 ZFAND3Q9H8U3 227 aa13.3□□□□□ -0.28
TOM1L1-221ENST00000575882 MINOS1-NBL1R4GNA1 71 aa13.3□□□□□ -0.28
TOM1L1-221ENST00000575882 K7ENP7 123 aa13.3□□□□□ -0.28
TOM1L1-221ENST00000575882 CCL21O00585 134 aa13.3□□□□□ -0.28
TOM1L1-221ENST00000575882 BUB3O43684 328 aa13.3□□□□□ -0.28
TOM1L1-221ENST00000575882 PRSS1P07477 247 aa13.3□□□□□ -0.28
TOM1L1-221ENST00000575882 IGKV2D-26A0A0A0MRZ7 120 aa13.29□□□□□ -0.28
TOM1L1-221ENST00000575882 CLEC3BP05452 202 aa13.29□□□□□ -0.28
TOM1L1-221ENST00000575882 TM4SF20Q53R12 229 aa13.29□□□□□ -0.28
TOM1L1-221ENST00000575882 C1orf122Q6ZSJ8 110 aa13.29□□□□□ -0.28
TOM1L1-221ENST00000575882 DTX2Q86UW9 622 aa13.29□□□□□ -0.28
TOM1L1-221ENST00000575882 SPTBN2O15020 2390 aa13.29□□□□□ -0.28
TOM1L1-221ENST00000575882 RBAKDNA6NC62 111 aa13.29□□□□□ -0.28
TOM1L1-221ENST00000575882 CIDEAO60543 219 aa13.29□□□□□ -0.28
TOM1L1-221ENST00000575882 ZFP36P26651 326 aaKnown RBP13.29□□□□□ -0.28
TOM1L1-221ENST00000575882 OR2K2Q8NGT1 345 aa13.29□□□□□ -0.28
TOM1L1-221ENST00000575882 FAM110DQ8TAY7 271 aaPredicted RBP13.29□□□□□ -0.28
TOM1L1-221ENST00000575882 PIFOQ8TCI5 191 aa13.29□□□□□ -0.28
TOM1L1-221ENST00000575882 ZMAT4Q9H898 229 aa13.29□□□□□ -0.28
TOM1L1-221ENST00000575882 HHLA3Q9XRX5 114 aa13.29□□□□□ -0.28
TOM1L1-221ENST00000575882 TLN1Q9Y490 2541 aaKnown RBP13.28□□□□□ -0.28
TOM1L1-221ENST00000575882 IGKV3D-20A0A0C4DH25 116 aa13.28□□□□□ -0.28
TOM1L1-221ENST00000575882 SAP30O75446 220 aa13.28□□□□□ -0.28
TOM1L1-221ENST00000575882 C11orf71Q6IPW1 123 aa13.28□□□□□ -0.28
TOM1L1-221ENST00000575882 TMEM158Q8WZ71 300 aa13.28□□□□□ -0.28
TOM1L1-221ENST00000575882 IGHV3OR16-13A0A075B7E8 117 aa13.28□□□□□ -0.28
TOM1L1-221ENST00000575882 IGHV3-74A0A0B4J1X5 117 aa13.28□□□□□ -0.28
TOM1L1-221ENST00000575882 RAB9AP51151 201 aa13.28□□□□□ -0.28
TOM1L1-221ENST00000575882 TTTY13Q9BZ97 58 aa13.28□□□□□ -0.28
TOM1L1-221ENST00000575882 C11orf21Q9P2W6 132 aa13.28□□□□□ -0.28
TOM1L1-221ENST00000575882 FOXC2Q99958 501 aa13.27□□□□□ -0.29
TOM1L1-221ENST00000575882 SLC50A1Q9BRV3 221 aa13.27□□□□□ -0.29
TOM1L1-221ENST00000575882 AGPAT4-IT1Q9H0P7 198 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 99.8 ms