RNA–Protein interactions for RNA: ENST00000508531.1

PDLIM5-211, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 480 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-211ENST00000508531 RPS21P63220 83 aaKnown RBP3.58□□□□□ -1.84
PDLIM5-211ENST00000508531 EDDM3AQ14507 147 aa3.58□□□□□ -1.84
PDLIM5-211ENST00000508531 CST6Q15828 149 aa3.58□□□□□ -1.84
PDLIM5-211ENST00000508531 PIGYQ3MUY2 71 aa3.58□□□□□ -1.84
PDLIM5-211ENST00000508531 ZNF876PQ49A33 203 aa3.58□□□□□ -1.84
PDLIM5-211ENST00000508531 MEIG1Q5JSS6 88 aa3.58□□□□□ -1.84
PDLIM5-211ENST00000508531 FAM27BQ5VT28 67 aa3.58□□□□□ -1.84
PDLIM5-211ENST00000508531 ZNF497Q6ZNH5 498 aa3.58□□□□□ -1.84
PDLIM5-211ENST00000508531 PHLDA1Q8WV24 401 aaPredicted RBP3.58□□□□□ -1.84
PDLIM5-211ENST00000508531 IFI27L1Q96BM0 104 aa3.58□□□□□ -1.84
PDLIM5-211ENST00000508531 ZNF524Q96C55 264 aa3.58□□□□□ -1.84
PDLIM5-211ENST00000508531 FMC1Q96HJ9 113 aa3.58□□□□□ -1.84
PDLIM5-211ENST00000508531 LINC00479Q96M42 142 aa3.58□□□□□ -1.84
PDLIM5-211ENST00000508531 RASL11BQ9BPW5 248 aa3.58□□□□□ -1.84
PDLIM5-211ENST00000508531 RNASE7Q9H1E1 156 aaKnown RBP3.58□□□□□ -1.84
PDLIM5-211ENST00000508531 FBXL15Q9H469 300 aa3.58□□□□□ -1.84
PDLIM5-211ENST00000508531 HRASLS2Q9NWW9 162 aa3.58□□□□□ -1.84
PDLIM5-211ENST00000508531 NHP2Q9NX24 153 aaKnown RBP3.58□□□□□ -1.84
PDLIM5-211ENST00000508531 KLRF1Q9NZS2 232 aa3.58□□□□□ -1.84
PDLIM5-211ENST00000508531 B4GALT7Q9UBV7 327 aa3.58□□□□□ -1.84
PDLIM5-211ENST00000508531 PRO0461Q9UI25 63 aa3.58□□□□□ -1.84
PDLIM5-211ENST00000508531 AMMECR1Q9Y4X0 333 aaPredicted RBP3.58□□□□□ -1.84
PDLIM5-211ENST00000508531 LSM4Q9Y4Z0 139 aaKnown RBP3.58□□□□□ -1.84
PDLIM5-211ENST00000508531 HILPDAQ9Y5L2 63 aa3.58□□□□□ -1.84
PDLIM5-211ENST00000508531 DNHD1Q96M86 4753 aa3.58□□□□□ -1.84
PDLIM5-211ENST00000508531 TNRC6BQ9UPQ9 1833 aaKnown RBP3.58□□□□□ -1.84
PDLIM5-211ENST00000508531 TNRC6AQ8NDV7 1962 aaKnown RBP3.58□□□□□ -1.84
PDLIM5-211ENST00000508531 TDRD6O60522 2096 aaKnown RBP3.58□□□□□ -1.84
PDLIM5-211ENST00000508531 SDK2Q58EX2 2172 aa3.58□□□□□ -1.84
PDLIM5-211ENST00000508531 FBN3Q75N90 2809 aa3.57□□□□□ -1.84
PDLIM5-211ENST00000508531 LRBAP50851 2863 aa3.57□□□□□ -1.84
PDLIM5-211ENST00000508531 TRBV6-1A0A0K0K1D8 114 aa3.57□□□□□ -1.84
PDLIM5-211ENST00000508531 A0A1B0GUT8 65 aa3.57□□□□□ -1.84
PDLIM5-211ENST00000508531 LINC01549A6NIU2 74 aa3.57□□□□□ -1.84
PDLIM5-211ENST00000508531 K7ENP7 123 aa3.57□□□□□ -1.84
PDLIM5-211ENST00000508531 SPRY1O43609 319 aaPredicted RBP3.57□□□□□ -1.84
PDLIM5-211ENST00000508531 SVILO95425 2214 aa3.57□□□□□ -1.84
PDLIM5-211ENST00000508531 MT-ATP8P03928 68 aa3.57□□□□□ -1.84
PDLIM5-211ENST00000508531 ACYP1P07311 99 aa3.57□□□□□ -1.84
PDLIM5-211ENST00000508531 CRYGBP07316 175 aa3.57□□□□□ -1.84
PDLIM5-211ENST00000508531 SCTP09683 121 aa3.57□□□□□ -1.84
PDLIM5-211ENST00000508531 ORM2P19652 201 aa3.57□□□□□ -1.84
PDLIM5-211ENST00000508531 PLNP26678 52 aa3.57□□□□□ -1.84
PDLIM5-211ENST00000508531 ID1P41134 155 aa3.57□□□□□ -1.84
PDLIM5-211ENST00000508531 NMUP48645 174 aa3.57□□□□□ -1.84
PDLIM5-211ENST00000508531 SUB1P53999 127 aaKnown RBP eCLIP3.57□□□□□ -1.84
PDLIM5-211ENST00000508531 MFAP4P55083 255 aa3.57□□□□□ -1.84
PDLIM5-211ENST00000508531 FOXA3P55318 350 aaPredicted RBP3.57□□□□□ -1.84
PDLIM5-211ENST00000508531 CENPEQ02224 2701 aa3.57□□□□□ -1.84
PDLIM5-211ENST00000508531 FXYD3Q14802 87 aa3.57□□□□□ -1.84
PDLIM5-211ENST00000508531 C12orf74Q32Q52 190 aa3.57□□□□□ -1.84
PDLIM5-211ENST00000508531 KIAA2026Q5HYC2 2103 aa3.57□□□□□ -1.84
PDLIM5-211ENST00000508531 UTF1Q5T230 341 aa3.57□□□□□ -1.84
PDLIM5-211ENST00000508531 AMTNQ6UX39 209 aa3.57□□□□□ -1.84
PDLIM5-211ENST00000508531 SBSPONQ8IVN8 264 aa3.57□□□□□ -1.84
PDLIM5-211ENST00000508531 TMEM178AQ8NBL3 297 aa3.57□□□□□ -1.84
PDLIM5-211ENST00000508531 OR11H6Q8NGC7 330 aa3.57□□□□□ -1.84
PDLIM5-211ENST00000508531 ZNRF2Q8NHG8 242 aa3.57□□□□□ -1.84
PDLIM5-211ENST00000508531 IL1F10Q8WWZ1 152 aa3.57□□□□□ -1.84
PDLIM5-211ENST00000508531 TMEM158Q8WZ71 300 aa3.57□□□□□ -1.84
PDLIM5-211ENST00000508531 SNRNP40Q96DI7 357 aaKnown RBP3.57□□□□□ -1.84
PDLIM5-211ENST00000508531 LINC01600Q96MT4 127 aa3.57□□□□□ -1.84
PDLIM5-211ENST00000508531 C20orf78Q9BR46 151 aa3.57□□□□□ -1.84
PDLIM5-211ENST00000508531 ZNF355PQ9NSJ1 428 aa3.57□□□□□ -1.84
PDLIM5-211ENST00000508531 MED13Q9UHV7 2174 aa3.57□□□□□ -1.84
PDLIM5-211ENST00000508531 IGLV3-32A0A0A0MS00 114 aa3.56□□□□□ -1.84
PDLIM5-211ENST00000508531 C15orf62A8K5M9 175 aa3.56□□□□□ -1.84
PDLIM5-211ENST00000508531 PEX7O00628 323 aa3.56□□□□□ -1.84
PDLIM5-211ENST00000508531 UQCRQO14949 82 aa3.56□□□□□ -1.84
PDLIM5-211ENST00000508531 SYNGR3O43761 229 aa3.56□□□□□ -1.84
PDLIM5-211ENST00000508531 DPM2O94777 84 aa3.56□□□□□ -1.84
PDLIM5-211ENST00000508531 BRI3O95415 125 aa3.56□□□□□ -1.84
PDLIM5-211ENST00000508531 OR2H2O95918 312 aa3.56□□□□□ -1.84
PDLIM5-211ENST00000508531 IGKV1-39P01597 117 aa3.56□□□□□ -1.84
PDLIM5-211ENST00000508531 IGLV2-8P01709 118 aa3.56□□□□□ -1.84
PDLIM5-211ENST00000508531 IGKV1D-39P04432 117 aa3.56□□□□□ -1.84
PDLIM5-211ENST00000508531 IGKV3-11P04433 115 aa3.56□□□□□ -1.84
PDLIM5-211ENST00000508531 LGALS1P09382 135 aaKnown RBP3.56□□□□□ -1.84
PDLIM5-211ENST00000508531 PATE4P0C8F1 98 aa3.56□□□□□ -1.84
PDLIM5-211ENST00000508531 CRYGSP22914 178 aa3.56□□□□□ -1.84
PDLIM5-211ENST00000508531 EMP1P54849 157 aa3.56□□□□□ -1.84
PDLIM5-211ENST00000508531 DLX6P56179 175 aa3.56□□□□□ -1.84
PDLIM5-211ENST00000508531 UBE2L3P68036 154 aaKnown RBP3.56□□□□□ -1.84
PDLIM5-211ENST00000508531 NNATQ16517 81 aa3.56□□□□□ -1.84
PDLIM5-211ENST00000508531 KRTAP21-3Q3LHN1 58 aa3.56□□□□□ -1.84
PDLIM5-211ENST00000508531 SH2D6Q7Z4S9 175 aa3.56□□□□□ -1.84
PDLIM5-211ENST00000508531 ORMDL3Q8N138 153 aa3.56□□□□□ -1.84
PDLIM5-211ENST00000508531 DRAM1Q8N682 238 aa3.56□□□□□ -1.84
PDLIM5-211ENST00000508531 Q8N7P7 452 aa3.56□□□□□ -1.84
PDLIM5-211ENST00000508531 FLVCR1-AS1Q8TAF5 88 aa3.56□□□□□ -1.84
PDLIM5-211ENST00000508531 MYOZ3Q8TDC0 251 aa3.56□□□□□ -1.84
PDLIM5-211ENST00000508531 ZDHHC19Q8WVZ1 309 aaPredicted RBP3.56□□□□□ -1.84
PDLIM5-211ENST00000508531 TMEM101Q96IK0 257 aa3.56□□□□□ -1.84
PDLIM5-211ENST00000508531 CYYR1Q96J86 154 aa3.56□□□□□ -1.84
PDLIM5-211ENST00000508531 HIST1H4GQ99525 98 aa3.56□□□□□ -1.84
PDLIM5-211ENST00000508531 MGST2Q99735 147 aa3.56□□□□□ -1.84
PDLIM5-211ENST00000508531 INSIG2Q9Y5U4 225 aa3.56□□□□□ -1.84
PDLIM5-211ENST00000508531 MPC1Q9Y5U8 109 aa3.56□□□□□ -1.84
PDLIM5-211ENST00000508531 FREM3P0C091 2139 aa3.56□□□□□ -1.84
PDLIM5-211ENST00000508531 CRYBG3Q68DQ2 2970 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 109 ms