RNA–Protein interactions for RNA: ENST00000382099.2

VLDLR-202, Transcript of very low density lipoprotein receptor, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VLDLR, Length 3,240 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VLDLR-202ENST00000382099 TRGV9Q99603 122 aa11.87□□□□□ -0.51
VLDLR-202ENST00000382099 ZMAT4Q9H898 229 aa11.87□□□□□ -0.51
VLDLR-202ENST00000382099 MDP1Q86V88 176 aa11.87□□□□□ -0.51
VLDLR-202ENST00000382099 C10orf126Q8N4M7 172 aa11.87□□□□□ -0.51
VLDLR-202ENST00000382099 TRAV2A0A0B4J234 112 aa11.86□□□□□ -0.51
VLDLR-202ENST00000382099 IGHV5-10-1A0A0J9YXX1 117 aa11.86□□□□□ -0.51
VLDLR-202ENST00000382099 A4D1N5 150 aa11.86□□□□□ -0.51
VLDLR-202ENST00000382099 ZNF815PA8K554 130 aa11.86□□□□□ -0.51
VLDLR-202ENST00000382099 TMEM78Q5T7P6 136 aa11.86□□□□□ -0.51
VLDLR-202ENST00000382099 RPS19BP1Q86WX3 136 aaKnown RBP11.86□□□□□ -0.51
VLDLR-202ENST00000382099 TDHQ8IZJ6 230 aa11.86□□□□□ -0.51
VLDLR-202ENST00000382099 RASL10AQ92737 203 aa11.86□□□□□ -0.51
VLDLR-202ENST00000382099 FOXC1Q12948 553 aa11.86□□□□□ -0.51
VLDLR-202ENST00000382099 C8orf49Q96NF6 230 aa11.86□□□□□ -0.51
VLDLR-202ENST00000382099 IGHV3OR15-7A0A075B7D8 119 aa11.86□□□□□ -0.51
VLDLR-202ENST00000382099 SAA1P0DJI8 122 aaPredicted RBP11.86□□□□□ -0.51
VLDLR-202ENST00000382099 C9orf153Q5TBE3 101 aa11.86□□□□□ -0.51
VLDLR-202ENST00000382099 HCP5Q6MZN7 132 aa11.86□□□□□ -0.51
VLDLR-202ENST00000382099 CXCL12P48061 93 aa11.85□□□□□ -0.51
VLDLR-202ENST00000382099 ZNF493Q6ZR52 646 aa11.85□□□□□ -0.51
VLDLR-202ENST00000382099 TRPT1Q86TN4 253 aaKnown RBP11.85□□□□□ -0.51
VLDLR-202ENST00000382099 ZNRD1Q9P1U0 126 aa11.85□□□□□ -0.51
VLDLR-202ENST00000382099 B3GALT5-AS1P59052 145 aa11.85□□□□□ -0.51
VLDLR-202ENST00000382099 ZNRF1Q8ND25 227 aa11.85□□□□□ -0.51
VLDLR-202ENST00000382099 RELNP78509 3460 aa11.85□□□□□ -0.51
VLDLR-202ENST00000382099 PKDREJQ9NTG1 2253 aa11.85□□□□□ -0.51
VLDLR-202ENST00000382099 SS18L1O75177 396 aaPredicted RBP11.84□□□□□ -0.51
VLDLR-202ENST00000382099 PRDX2P32119 198 aa11.84□□□□□ -0.51
VLDLR-202ENST00000382099 EFNA4P52798 201 aa11.84□□□□□ -0.51
VLDLR-202ENST00000382099 LOXL3P58215 753 aa11.84□□□□□ -0.51
VLDLR-202ENST00000382099 PAX8Q06710 450 aa11.84□□□□□ -0.51
VLDLR-202ENST00000382099 FAM57AQ8TBR7 257 aa11.84□□□□□ -0.51
VLDLR-202ENST00000382099 MSRB1Q9NZV6 116 aa11.84□□□□□ -0.51
VLDLR-202ENST00000382099 CRIP2P52943 208 aaPredicted RBP11.84□□□□□ -0.51
VLDLR-202ENST00000382099 ZNF56Q15929 161 aa11.84□□□□□ -0.51
VLDLR-202ENST00000382099 OTORQ9NRC9 128 aa11.84□□□□□ -0.51
VLDLR-202ENST00000382099 BEX4Q9NWD9 120 aaPredicted RBP11.84□□□□□ -0.51
VLDLR-202ENST00000382099 OOSP1A8MZH6 123 aa11.84□□□□□ -0.51
VLDLR-202ENST00000382099 LGALS1P09382 135 aaKnown RBP11.84□□□□□ -0.51
VLDLR-202ENST00000382099 Q8N1Y9 231 aa11.84□□□□□ -0.51
VLDLR-202ENST00000382099 HES7Q9BYE0 225 aa11.84□□□□□ -0.51
VLDLR-202ENST00000382099 NGBQ9NPG2 151 aa11.84□□□□□ -0.51
VLDLR-202ENST00000382099 IGKV1D-37A0A075B6S9 117 aa11.83□□□□□ -0.52
VLDLR-202ENST00000382099 TRAV25A0A0B4J276 109 aa11.83□□□□□ -0.52
VLDLR-202ENST00000382099 E7EUB6 86 aa11.83□□□□□ -0.52
VLDLR-202ENST00000382099 OVOL3O00110 214 aa11.83□□□□□ -0.52
VLDLR-202ENST00000382099 CRIP1P50238 77 aa11.83□□□□□ -0.52
VLDLR-202ENST00000382099 CD177Q8N6Q3 437 aa11.83□□□□□ -0.52
VLDLR-202ENST00000382099 EDA2RQ9HAV5 297 aa11.83□□□□□ -0.52
VLDLR-202ENST00000382099 SPANXA1Q9NS26 97 aa11.83□□□□□ -0.52
VLDLR-202ENST00000382099 U3KQK5 164 aa11.83□□□□□ -0.52
VLDLR-202ENST00000382099 M0R3E3 92 aa11.83□□□□□ -0.52
VLDLR-202ENST00000382099 TNFRSF6BO95407 300 aa11.83□□□□□ -0.52
VLDLR-202ENST00000382099 Q1RN00 199 aa11.83□□□□□ -0.52
VLDLR-202ENST00000382099 RITA1Q96K30 269 aa11.83□□□□□ -0.52
VLDLR-202ENST00000382099 DNAJC30Q96LL9 226 aa11.83□□□□□ -0.52
VLDLR-202ENST00000382099 KLK5Q9Y337 293 aaPredicted RBP11.83□□□□□ -0.52
VLDLR-202ENST00000382099 ZNF785A8K8V0 405 aa11.82□□□□□ -0.52
VLDLR-202ENST00000382099 MAGEA5P43359 124 aa11.82□□□□□ -0.52
VLDLR-202ENST00000382099 SUB1P53999 127 aaKnown RBP eCLIP11.82□□□□□ -0.52
VLDLR-202ENST00000382099 FAM19A5Q7Z5A7 132 aaPredicted RBP11.82□□□□□ -0.52
VLDLR-202ENST00000382099 RPUSD1Q9UJJ7 312 aaKnown RBP11.82□□□□□ -0.52
VLDLR-202ENST00000382099 TEX49A0A1B0GTD5 131 aa11.82□□□□□ -0.52
VLDLR-202ENST00000382099 FSTL3O95633 263 aa11.82□□□□□ -0.52
VLDLR-202ENST00000382099 IGLV2-11P01706 119 aa11.82□□□□□ -0.52
VLDLR-202ENST00000382099 IGHV4-39P01824 125 aa11.82□□□□□ -0.52
VLDLR-202ENST00000382099 GP9P14770 177 aa11.82□□□□□ -0.52
VLDLR-202ENST00000382099 UBE2D3P61077 147 aa11.82□□□□□ -0.52
VLDLR-202ENST00000382099 UBE2D2P62837 147 aa11.82□□□□□ -0.52
VLDLR-202ENST00000382099 PCOLCEQ15113 449 aa11.82□□□□□ -0.52
VLDLR-202ENST00000382099 C17orf77Q96MU5 243 aa11.82□□□□□ -0.52
VLDLR-202ENST00000382099 NXT2Q9NPJ8 142 aaKnown RBP11.82□□□□□ -0.52
VLDLR-202ENST00000382099 SPTAN1Q13813 2472 aaKnown RBP11.82□□□□□ -0.52
VLDLR-202ENST00000382099 CEP295Q9C0D2 2601 aa11.81□□□□□ -0.52
VLDLR-202ENST00000382099 A0A1W2PPI3 338 aa11.81□□□□□ -0.52
VLDLR-202ENST00000382099 TIMM8AO60220 97 aaPredicted RBP11.81□□□□□ -0.52
VLDLR-202ENST00000382099 PLEKHB2Q96CS7 222 aa11.81□□□□□ -0.52
VLDLR-202ENST00000382099 COL12A1Q99715 3063 aa11.81□□□□□ -0.52
VLDLR-202ENST00000382099 CD7P09564 240 aa11.81□□□□□ -0.52
VLDLR-202ENST00000382099 HIGD1AQ9Y241 93 aa11.81□□□□□ -0.52
VLDLR-202ENST00000382099 SIT1Q9Y3P8 196 aa11.81□□□□□ -0.52
VLDLR-202ENST00000382099 NPFFO15130 113 aa11.81□□□□□ -0.52
VLDLR-202ENST00000382099 SPINK14Q6IE38 97 aa11.81□□□□□ -0.52
VLDLR-202ENST00000382099 FAM90A1Q86YD7 464 aa11.81□□□□□ -0.52
VLDLR-202ENST00000382099 TMEM105Q8N8V8 129 aa11.81□□□□□ -0.52
VLDLR-202ENST00000382099 KLHL30-AS1Q8NEE0 82 aa11.81□□□□□ -0.52
VLDLR-202ENST00000382099 LINC01587Q99440 93 aa11.81□□□□□ -0.52
VLDLR-202ENST00000382099 TACC2O95359 2948 aa11.8□□□□□ -0.52
VLDLR-202ENST00000382099 SLC25A16P16260 332 aa11.8□□□□□ -0.52
VLDLR-202ENST00000382099 MZT1Q08AG7 82 aa11.8□□□□□ -0.52
VLDLR-202ENST00000382099 ADIPOQQ15848 244 aa11.8□□□□□ -0.52
VLDLR-202ENST00000382099 MRPL14Q6P1L8 145 aaKnown RBP11.8□□□□□ -0.52
VLDLR-202ENST00000382099 PRADC1Q9BSG0 188 aa11.8□□□□□ -0.52
VLDLR-202ENST00000382099 PLNP26678 52 aa11.8□□□□□ -0.52
VLDLR-202ENST00000382099 WT1-ASQ06250 92 aa11.8□□□□□ -0.52
VLDLR-202ENST00000382099 PRR30Q53SZ7 412 aaPredicted RBP11.8□□□□□ -0.52
VLDLR-202ENST00000382099 RUSC1-AS1Q66K80 236 aa11.8□□□□□ -0.52
VLDLR-202ENST00000382099 KALRNO60229 2985 aa11.8□□□□□ -0.52
VLDLR-202ENST00000382099 LY6G6EA0A0G2JKS1 128 aa11.79□□□□□ -0.52
VLDLR-202ENST00000382099 SH2D1AO60880 128 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms