RNA–Protein interactions for RNA: ENST00000341316.6

SPG7-202, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 1 (best) BASIC

Gene SPG7, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-202ENST00000341316 ERASQ7Z444 233 aa15.55■□□□□ 0.08
SPG7-202ENST00000341316 RNASE8Q8TDE3 154 aaKnown RBP15.55■□□□□ 0.08
SPG7-202ENST00000341316 VGLL1Q99990 258 aa15.55■□□□□ 0.08
SPG7-202ENST00000341316 MYO18BQ8IUG5 2567 aa15.55■□□□□ 0.08
SPG7-202ENST00000341316 CLPSL1A2RUU4 121 aa15.55■□□□□ 0.08
SPG7-202ENST00000341316 Q8TAT8 98 aa15.55■□□□□ 0.08
SPG7-202ENST00000341316 AP5S1Q9NUS5 200 aa15.55■□□□□ 0.08
SPG7-202ENST00000341316 BVES-AS1Q5T3Y7 98 aa15.54■□□□□ 0.08
SPG7-202ENST00000341316 GATD1Q8NB37 220 aa15.54■□□□□ 0.08
SPG7-202ENST00000341316 IGHV3-66A0A0C4DH42 116 aa15.54■□□□□ 0.08
SPG7-202ENST00000341316 LINC01545Q5VT33 79 aa15.54■□□□□ 0.08
SPG7-202ENST00000341316 CCL19Q99731 98 aa15.54■□□□□ 0.08
SPG7-202ENST00000341316 LINC00527Q9UJ94 153 aa15.54■□□□□ 0.08
SPG7-202ENST00000341316 TMSB15BA0A087X1C1 80 aa15.53■□□□□ 0.08
SPG7-202ENST00000341316 IGHV1-69DA0A0B4J2H0 117 aa15.53■□□□□ 0.08
SPG7-202ENST00000341316 SERTM2A0A1B0GWG4 89 aa15.53■□□□□ 0.08
SPG7-202ENST00000341316 BUB3O43684 328 aa15.53■□□□□ 0.08
SPG7-202ENST00000341316 SH2D1AO60880 128 aa15.53■□□□□ 0.08
SPG7-202ENST00000341316 IGHV1-69P01742 117 aa15.53■□□□□ 0.08
SPG7-202ENST00000341316 CT45A10P0DMU9 189 aa15.53■□□□□ 0.08
SPG7-202ENST00000341316 PRR25Q96S07 402 aa15.53■□□□□ 0.08
SPG7-202ENST00000341316 TRAV40A0A0B4J280 105 aa15.52■□□□□ 0.08
SPG7-202ENST00000341316 C10orf105Q8TEF2 133 aa15.52■□□□□ 0.08
SPG7-202ENST00000341316 PIMREGQ9BSJ6 248 aa15.52■□□□□ 0.08
SPG7-202ENST00000341316 IGHV3OR16-13A0A075B7E8 117 aa15.52■□□□□ 0.07
SPG7-202ENST00000341316 IGHV3-74A0A0B4J1X5 117 aa15.52■□□□□ 0.07
SPG7-202ENST00000341316 TAX1BP3O14907 124 aa15.52■□□□□ 0.07
SPG7-202ENST00000341316 ZNF80P51504 273 aaPredicted RBP15.52■□□□□ 0.07
SPG7-202ENST00000341316 VAMP3Q15836 100 aa15.52■□□□□ 0.07
SPG7-202ENST00000341316 C21orf62-AS1Q17RA5 79 aa15.52■□□□□ 0.07
SPG7-202ENST00000341316 FA2HQ7L5A8 372 aa15.52■□□□□ 0.07
SPG7-202ENST00000341316 ZNF747Q9BV97 191 aa15.52■□□□□ 0.07
SPG7-202ENST00000341316 MS4A6AQ9H2W1 248 aa15.52■□□□□ 0.07
SPG7-202ENST00000341316 MUC21A0A0G2JKD1 596 aa15.51■□□□□ 0.07
SPG7-202ENST00000341316 MUC21A0A140T8X8 626 aa15.51■□□□□ 0.07
SPG7-202ENST00000341316 A0A1B0GW15 77 aa15.51■□□□□ 0.07
SPG7-202ENST00000341316 NCR2O95944 276 aa15.51■□□□□ 0.07
SPG7-202ENST00000341316 MUC21Q5SSG8 566 aa15.51■□□□□ 0.07
SPG7-202ENST00000341316 PRSS3P2Q8NHM4 247 aa15.51■□□□□ 0.07
SPG7-202ENST00000341316 PRAC2D3DTV9 90 aa15.51■□□□□ 0.07
SPG7-202ENST00000341316 COX8CQ7Z4L0 72 aa15.51■□□□□ 0.07
SPG7-202ENST00000341316 OR4C5Q8NGB2 326 aa15.51■□□□□ 0.07
SPG7-202ENST00000341316 MOB4Q9Y3A3 225 aa15.51■□□□□ 0.07
SPG7-202ENST00000341316 IGHV3-49A0A0A0MS15 119 aa15.5■□□□□ 0.07
SPG7-202ENST00000341316 IGHV4-38-2P0DP08 117 aa15.5■□□□□ 0.07
SPG7-202ENST00000341316 C19orf54Q5BKX5 351 aa15.5■□□□□ 0.07
SPG7-202ENST00000341316 ARL6IP6Q8N6S5 226 aa15.5■□□□□ 0.07
SPG7-202ENST00000341316 EEF1AKMT3Q96AZ1 226 aa15.5■□□□□ 0.07
SPG7-202ENST00000341316 IGHV4-30-2A0A087WSY4 118 aa15.5■□□□□ 0.07
SPG7-202ENST00000341316 A0A087X0K7 114 aa15.5■□□□□ 0.07
SPG7-202ENST00000341316 TMEM189A5PLL7 270 aa15.5■□□□□ 0.07
SPG7-202ENST00000341316 ZNF207O43670 478 aaKnown RBP15.5■□□□□ 0.07
SPG7-202ENST00000341316 GOSR1O95249 250 aa15.5■□□□□ 0.07
SPG7-202ENST00000341316 FAM106AQ4KMX7 169 aa15.5■□□□□ 0.07
SPG7-202ENST00000341316 Q6AWC8 147 aa15.5■□□□□ 0.07
SPG7-202ENST00000341316 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa15.5■□□□□ 0.07
SPG7-202ENST00000341316 C12orf54Q6X4T0 127 aa15.5■□□□□ 0.07
SPG7-202ENST00000341316 RNF182Q8N6D2 247 aa15.5■□□□□ 0.07
SPG7-202ENST00000341316 OR10AG1Q8NH19 301 aa15.5■□□□□ 0.07
SPG7-202ENST00000341316 IFI27P40305 119 aaPredicted RBP15.49■□□□□ 0.07
SPG7-202ENST00000341316 ERCC8Q13216 396 aa15.49■□□□□ 0.07
SPG7-202ENST00000341316 SAPCD1Q5SSQ6 148 aa15.49■□□□□ 0.07
SPG7-202ENST00000341316 LYZL1Q6UWQ5 148 aa15.49■□□□□ 0.07
SPG7-202ENST00000341316 ZNF575Q86XF7 245 aa15.49■□□□□ 0.07
SPG7-202ENST00000341316 DEFB125Q8N687 156 aa15.49■□□□□ 0.07
SPG7-202ENST00000341316 K7EP13 123 aa15.48■□□□□ 0.07
SPG7-202ENST00000341316 LOXL1Q08397 574 aaPredicted RBP15.48■□□□□ 0.07
SPG7-202ENST00000341316 TRBV7-1A0A0A6YYK4 115 aa15.48■□□□□ 0.07
SPG7-202ENST00000341316 TRAV41A0A0B4J266 112 aa15.48■□□□□ 0.07
SPG7-202ENST00000341316 TMEM213A2RRL7 107 aa15.48■□□□□ 0.07
SPG7-202ENST00000341316 RBX1P62877 108 aa15.48■□□□□ 0.07
SPG7-202ENST00000341316 ZNF493Q6ZR52 646 aa15.48■□□□□ 0.07
SPG7-202ENST00000341316 LOC389332A0A1B0GUA5 103 aa15.47■□□□□ 0.07
SPG7-202ENST00000341316 D6R8Y8 96 aa15.47■□□□□ 0.07
SPG7-202ENST00000341316 PCP4P48539 62 aa15.47■□□□□ 0.07
SPG7-202ENST00000341316 HIST1H1AQ02539 215 aaPredicted RBP15.47■□□□□ 0.07
SPG7-202ENST00000341316 FOXE3Q13461 319 aa15.47■□□□□ 0.07
SPG7-202ENST00000341316 USP24Q9UPU5 2620 aa15.47■□□□□ 0.07
SPG7-202ENST00000341316 A0A096LNJ9 63 aa15.47■□□□□ 0.07
SPG7-202ENST00000341316 CBY3A6NI87 242 aa15.47■□□□□ 0.07
SPG7-202ENST00000341316 ATP5J2P56134 94 aa15.47■□□□□ 0.07
SPG7-202ENST00000341316 COX8AP10176 69 aa15.46■□□□□ 0.07
SPG7-202ENST00000341316 ATP5G2Q06055 141 aa15.46■□□□□ 0.07
SPG7-202ENST00000341316 MEGF9Q9H1U4 602 aa15.46■□□□□ 0.07
SPG7-202ENST00000341316 SIGLEC8Q9NYZ4 499 aa15.46■□□□□ 0.07
SPG7-202ENST00000341316 S100A7P31151 101 aa15.46■□□□□ 0.06
SPG7-202ENST00000341316 AMN1Q8IY45 258 aa15.46■□□□□ 0.06
SPG7-202ENST00000341316 OR8A1Q8NGG7 326 aa15.46■□□□□ 0.06
SPG7-202ENST00000341316 SNAI2O43623 268 aa15.45■□□□□ 0.06
SPG7-202ENST00000341316 LY6EQ16553 131 aa15.45■□□□□ 0.06
SPG7-202ENST00000341316 CLEC2AQ6UVW9 174 aa15.45■□□□□ 0.06
SPG7-202ENST00000341316 PSMG3-AS1Q96PY0 264 aa15.45■□□□□ 0.06
SPG7-202ENST00000341316 CENPEQ02224 2701 aa15.45■□□□□ 0.06
SPG7-202ENST00000341316 RAB9AP51151 201 aa15.45■□□□□ 0.06
SPG7-202ENST00000341316 C2orf91Q6ZV80 131 aa15.45■□□□□ 0.06
SPG7-202ENST00000341316 PRELID3AQ96N28 172 aa15.45■□□□□ 0.06
SPG7-202ENST00000341316 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP15.44■□□□□ 0.063e-9■■■■■ 28.3
SPG7-202ENST00000341316 TRAV8-2A0A0B4J237 113 aa15.44■□□□□ 0.06
SPG7-202ENST00000341316 FBLL1A6NHQ2 334 aaKnown RBP15.44■□□□□ 0.06
SPG7-202ENST00000341316 FAM104BQ5XKR9 115 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms