RNA–Protein interactions for RNA: ENST00000556162.5

SNX6-206, Transcript of sorting nexin 6, humanhuman

TSL 2

Gene SNX6, Length 1,855 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-206ENST00000556162 EXOC3-AS1Q8N2X6 119 aa10.42□□□□□ -0.74
SNX6-206ENST00000556162 FAM213BQ8TBF2 198 aa10.42□□□□□ -0.74
SNX6-206ENST00000556162 PHYHIPLQ96FC7 376 aa10.42□□□□□ -0.74
SNX6-206ENST00000556162 CSTL1Q9H114 145 aa10.42□□□□□ -0.74
SNX6-206ENST00000556162 TMEM167BQ9NRX6 74 aa10.42□□□□□ -0.74
SNX6-206ENST00000556162 PRELID1Q9Y255 219 aa10.42□□□□□ -0.74
SNX6-206ENST00000556162 ZNF705FA8MVS1 300 aaPredicted RBP10.42□□□□□ -0.74
SNX6-206ENST00000556162 RAB5CP51148 216 aa10.42□□□□□ -0.74
SNX6-206ENST00000556162 ICAM4Q14773 271 aa10.42□□□□□ -0.74
SNX6-206ENST00000556162 IQCF2Q8IXL9 164 aa10.42□□□□□ -0.74
SNX6-206ENST00000556162 OR4B1Q8NGF8 309 aa10.42□□□□□ -0.74
SNX6-206ENST00000556162 FAM210AQ96ND0 272 aa10.42□□□□□ -0.74
SNX6-206ENST00000556162 BOLA1Q9Y3E2 137 aa10.42□□□□□ -0.74
SNX6-206ENST00000556162 MAP1LC3B2A6NCE7 125 aa10.41□□□□□ -0.74
SNX6-206ENST00000556162 UBE2CO00762 179 aa10.41□□□□□ -0.74
SNX6-206ENST00000556162 DUSP14O95147 198 aaKnown RBP10.41□□□□□ -0.74
SNX6-206ENST00000556162 IGKV3-20P01619 116 aa10.41□□□□□ -0.74
SNX6-206ENST00000556162 NHLRC4P0CG21 123 aaPredicted RBP10.41□□□□□ -0.74
SNX6-206ENST00000556162 NUTF2P61970 127 aaKnown RBP10.41□□□□□ -0.74
SNX6-206ENST00000556162 MORN3Q6PF18 240 aaPredicted RBP10.41□□□□□ -0.74
SNX6-206ENST00000556162 OR8A1Q8NGG7 326 aa10.41□□□□□ -0.74
SNX6-206ENST00000556162 MRPL53Q96EL3 112 aaKnown RBP10.41□□□□□ -0.74
SNX6-206ENST00000556162 MAP1LC3BQ9GZQ8 125 aa10.41□□□□□ -0.74
SNX6-206ENST00000556162 M0R3E3 92 aa10.4□□□□□ -0.74
SNX6-206ENST00000556162 AGRNO00468 2067 aa10.4□□□□□ -0.74
SNX6-206ENST00000556162 FGF8P55075 233 aaPredicted RBP10.4□□□□□ -0.74
SNX6-206ENST00000556162 SUN5Q8TC36 379 aa10.4□□□□□ -0.74
SNX6-206ENST00000556162 Q9H3A6 140 aa10.4□□□□□ -0.74
SNX6-206ENST00000556162 ZNF705DP0CH99 300 aaPredicted RBP10.4□□□□□ -0.75
SNX6-206ENST00000556162 ZNF705BP0CI00 300 aaPredicted RBP10.4□□□□□ -0.75
SNX6-206ENST00000556162 CNN1P51911 297 aaKnown RBP10.4□□□□□ -0.75
SNX6-206ENST00000556162 HIST1H1AQ02539 215 aaPredicted RBP10.4□□□□□ -0.75
SNX6-206ENST00000556162 FAM74A1Q5RGS3 127 aa10.4□□□□□ -0.75
SNX6-206ENST00000556162 OR10J6PQ8NGY7 276 aa10.4□□□□□ -0.75
SNX6-206ENST00000556162 SFT2D1Q8WV19 159 aa10.4□□□□□ -0.75
SNX6-206ENST00000556162 MBD3L1Q8WWY6 194 aa10.4□□□□□ -0.75
SNX6-206ENST00000556162 CLUHP3Q96NS8 147 aa10.4□□□□□ -0.75
SNX6-206ENST00000556162 ZMAT4Q9H898 229 aa10.4□□□□□ -0.75
SNX6-206ENST00000556162 HUWE1Q7Z6Z7 4374 aaKnown RBP10.4□□□□□ -0.75
SNX6-206ENST00000556162 PRAC2D3DTV9 90 aa10.39□□□□□ -0.75
SNX6-206ENST00000556162 CA1P00915 261 aaPredicted RBP10.39□□□□□ -0.75
SNX6-206ENST00000556162 H2AFB1P0C5Y9 115 aa10.39□□□□□ -0.75
SNX6-206ENST00000556162 PRB4P10163 310 aaPredicted RBP10.39□□□□□ -0.75
SNX6-206ENST00000556162 CSN1S1P47710 185 aa10.39□□□□□ -0.75
SNX6-206ENST00000556162 SULT1A2P50226 295 aa10.39□□□□□ -0.75
SNX6-206ENST00000556162 SPATA25Q9BR10 227 aa10.39□□□□□ -0.75
SNX6-206ENST00000556162 TM2D3Q9BRN9 247 aa10.39□□□□□ -0.75
SNX6-206ENST00000556162 OTORQ9NRC9 128 aa10.39□□□□□ -0.75
SNX6-206ENST00000556162 NBEAL2Q6ZNJ1 2754 aa10.39□□□□□ -0.75
SNX6-206ENST00000556162 PGPA6NDG6 321 aa10.38□□□□□ -0.75
SNX6-206ENST00000556162 Q6ZWC4 215 aa10.38□□□□□ -0.75
SNX6-206ENST00000556162 RXFP4Q8TDU9 374 aa10.38□□□□□ -0.75
SNX6-206ENST00000556162 TMPRSS5Q9H3S3 457 aa10.38□□□□□ -0.75
SNX6-206ENST00000556162 PPP1R14DQ9NXH3 145 aa10.38□□□□□ -0.75
SNX6-206ENST00000556162 CMTM2Q8TAZ6 248 aa10.38□□□□□ -0.75
SNX6-206ENST00000556162 C1QTNF4Q9BXJ3 329 aa10.37□□□□□ -0.75
SNX6-206ENST00000556162 A0A1W2PRE2 83 aa10.36□□□□□ -0.75
SNX6-206ENST00000556162 A8MTW9 85 aa10.36□□□□□ -0.75
SNX6-206ENST00000556162 DEFB135Q30KP9 77 aa10.36□□□□□ -0.75
SNX6-206ENST00000556162 ALKAL2Q6UX46 152 aa10.36□□□□□ -0.75
SNX6-206ENST00000556162 TGP01266 2768 aa10.36□□□□□ -0.75
SNX6-206ENST00000556162 A0A1B0GV50 99 aa10.36□□□□□ -0.75
SNX6-206ENST00000556162 TEX46H3BTG2 121 aa10.36□□□□□ -0.75
SNX6-206ENST00000556162 GIG44P09565 113 aaPredicted RBP10.36□□□□□ -0.75
SNX6-206ENST00000556162 FXYD7P58549 80 aa10.36□□□□□ -0.75
SNX6-206ENST00000556162 SUMO1P63165 101 aaKnown RBP10.36□□□□□ -0.75
SNX6-206ENST00000556162 RCHY1Q96PM5 261 aa10.36□□□□□ -0.75
SNX6-206ENST00000556162 SLC35B3Q9H1N7 401 aa10.36□□□□□ -0.75
SNX6-206ENST00000556162 XCL2Q9UBD3 114 aa10.36□□□□□ -0.75
SNX6-206ENST00000556162 COL7A1Q02388 2944 aa10.35□□□□□ -0.75
SNX6-206ENST00000556162 ZNF705EA8MWA4 302 aaPredicted RBP10.35□□□□□ -0.75
SNX6-206ENST00000556162 SPRY2O43597 315 aa10.35□□□□□ -0.75
SNX6-206ENST00000556162 SLC25A5P05141 298 aaKnown RBP10.35□□□□□ -0.75
SNX6-206ENST00000556162 UBE2G2P60604 165 aa10.35□□□□□ -0.75
SNX6-206ENST00000556162 AMTNQ6UX39 209 aa10.35□□□□□ -0.75
SNX6-206ENST00000556162 ARL6IP6Q8N6S5 226 aa10.35□□□□□ -0.75
SNX6-206ENST00000556162 RNF183Q96D59 192 aa10.35□□□□□ -0.75
SNX6-206ENST00000556162 LINC00477Q96M19 166 aa10.35□□□□□ -0.75
SNX6-206ENST00000556162 NKX6-2Q9C056 277 aaPredicted RBP10.35□□□□□ -0.75
SNX6-206ENST00000556162 TP53TG1Q9Y2A0 90 aa10.35□□□□□ -0.75
SNX6-206ENST00000556162 DIRC3C9JPN6 131 aa10.34□□□□□ -0.75
SNX6-206ENST00000556162 NPIPB6E9PJ23 425 aa10.34□□□□□ -0.75
SNX6-206ENST00000556162 HBE1P02100 147 aa10.34□□□□□ -0.75
SNX6-206ENST00000556162 RETNQ9HD89 108 aa10.34□□□□□ -0.75
SNX6-206ENST00000556162 IGKV2-40A0A087WW87 121 aaPredicted RBP10.34□□□□□ -0.75
SNX6-206ENST00000556162 TRAV1-1A0A0B4J248 108 aa10.34□□□□□ -0.75
SNX6-206ENST00000556162 IGKV2D-40P01614 121 aaPredicted RBP10.34□□□□□ -0.75
SNX6-206ENST00000556162 AMBPP02760 352 aa10.34□□□□□ -0.75
SNX6-206ENST00000556162 ERCC8Q13216 396 aa10.34□□□□□ -0.75
SNX6-206ENST00000556162 TMEM78Q5T7P6 136 aa10.34□□□□□ -0.75
SNX6-206ENST00000556162 C9orf47Q6ZRZ4 202 aa10.34□□□□□ -0.75
SNX6-206ENST00000556162 C5orf17Q8NAS9 161 aa10.34□□□□□ -0.75
SNX6-206ENST00000556162 OVOL2Q9BRP0 275 aa10.34□□□□□ -0.75
SNX6-206ENST00000556162 AGPAT4-IT1Q9H0P7 198 aa10.34□□□□□ -0.75
SNX6-206ENST00000556162 RPH3ALQ9UNE2 315 aa10.34□□□□□ -0.75
SNX6-206ENST00000556162 YTHDF2Q9Y5A9 579 aaKnown RBP10.34□□□□□ -0.75
SNX6-206ENST00000556162 RBAKDNA6NC62 111 aa10.33□□□□□ -0.76
SNX6-206ENST00000556162 FAM74A7A6NL05 159 aa10.33□□□□□ -0.76
SNX6-206ENST00000556162 GGTLC3B5MD39 225 aa10.33□□□□□ -0.76
SNX6-206ENST00000556162 PPT1P50897 306 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 384.5 ms