RNA–Protein interactions for RNA: ENST00000520493.1

SQLE-204, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 737 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-204ENST00000520493 RER1O15258 196 aa1.82□□□□□ -2.12
SQLE-204ENST00000520493 SCTP09683 121 aa1.82□□□□□ -2.12
SQLE-204ENST00000520493 FABP2P12104 132 aa1.82□□□□□ -2.12
SQLE-204ENST00000520493 AKR1C3P42330 323 aa1.82□□□□□ -2.12
SQLE-204ENST00000520493 VMA21Q3ZAQ7 101 aa1.82□□□□□ -2.12
SQLE-204ENST00000520493 Q8IYB0 196 aa1.82□□□□□ -2.12
SQLE-204ENST00000520493 RELNP78509 3460 aa1.82□□□□□ -2.12
SQLE-204ENST00000520493 PIEZO2Q9H5I5 2752 aa1.82□□□□□ -2.12
SQLE-204ENST00000520493 OVOS2A0A0G2JMS6 1433 aa1.82□□□□□ -2.12
SQLE-204ENST00000520493 BOD1L1Q8NFC6 3051 aa1.82□□□□□ -2.12
SQLE-204ENST00000520493 ICE1Q9Y2F5 2266 aa1.82□□□□□ -2.12
SQLE-204ENST00000520493 FRMPD1Q5SYB0 1578 aa1.81□□□□□ -2.12
SQLE-204ENST00000520493 TRAV3A0A0B4J244 114 aa1.81□□□□□ -2.12
SQLE-204ENST00000520493 ASAH2BP0C7U1 165 aa1.81□□□□□ -2.12
SQLE-204ENST00000520493 UBBP0CG47 229 aa1.81□□□□□ -2.12
SQLE-204ENST00000520493 SSR2P43308 183 aa1.81□□□□□ -2.12
SQLE-204ENST00000520493 SRP9P49458 86 aaKnown RBP1.81□□□□□ -2.12
SQLE-204ENST00000520493 ROMO1P60602 79 aa1.81□□□□□ -2.12
SQLE-204ENST00000520493 KLRD1Q13241 179 aa1.81□□□□□ -2.12
SQLE-204ENST00000520493 MORN2Q502X0 79 aa1.81□□□□□ -2.12
SQLE-204ENST00000520493 LINC00305Q7Z4B0 112 aa1.81□□□□□ -2.12
SQLE-204ENST00000520493 OR8I2Q8N0Y5 310 aa1.81□□□□□ -2.12
SQLE-204ENST00000520493 OR4K15Q8NH41 348 aa1.81□□□□□ -2.12
SQLE-204ENST00000520493 RETNLBQ9BQ08 111 aa1.81□□□□□ -2.12
SQLE-204ENST00000520493 TMEM106BQ9NUM4 274 aa1.81□□□□□ -2.12
SQLE-204ENST00000520493 FN1P02751 2386 aaKnown RBP1.81□□□□□ -2.12
SQLE-204ENST00000520493 FER1L6Q2WGJ9 1857 aa1.81□□□□□ -2.12
SQLE-204ENST00000520493 CPDO75976 1380 aa1.81□□□□□ -2.12
SQLE-204ENST00000520493 MED23Q9ULK4 1368 aa1.81□□□□□ -2.12
SQLE-204ENST00000520493 ZFYVE26Q68DK2 2539 aa1.81□□□□□ -2.12
SQLE-204ENST00000520493 ATRQ13535 2644 aa1.81□□□□□ -2.12
SQLE-204ENST00000520493 SYNJ1O43426 1573 aa1.81□□□□□ -2.12
SQLE-204ENST00000520493 SPTAN1Q13813 2472 aaKnown RBP1.8□□□□□ -2.12
SQLE-204ENST00000520493 CENPFP49454 3210 aa1.8□□□□□ -2.12
SQLE-204ENST00000520493 ANAPC1Q9H1A4 1944 aa1.8□□□□□ -2.12
SQLE-204ENST00000520493 EPPK1P58107 5090 aaKnown RBP1.8□□□□□ -2.12
SQLE-204ENST00000520493 PDZD2O15018 2839 aa1.8□□□□□ -2.12
SQLE-204ENST00000520493 TRAV12-1A0A0B4J245 112 aa1.8□□□□□ -2.12
SQLE-204ENST00000520493 TRBV27A0A0K0K1C4 114 aa1.8□□□□□ -2.12
SQLE-204ENST00000520493 LOC107984640A0A0U1RRK4 108 aa1.8□□□□□ -2.12
SQLE-204ENST00000520493 RAB5CP51148 216 aa1.8□□□□□ -2.12
SQLE-204ENST00000520493 PDE6HQ13956 83 aa1.8□□□□□ -2.12
SQLE-204ENST00000520493 RNASE10Q5GAN6 216 aaKnown RBP1.8□□□□□ -2.12
SQLE-204ENST00000520493 LINC00311Q8N616 119 aa1.8□□□□□ -2.12
SQLE-204ENST00000520493 CHCHD1Q96BP2 118 aaKnown RBP1.8□□□□□ -2.12
SQLE-204ENST00000520493 TMEM138Q9NPI0 162 aa1.8□□□□□ -2.12
SQLE-204ENST00000520493 SOX21Q9Y651 276 aaPredicted RBP1.8□□□□□ -2.12
SQLE-204ENST00000520493 KIAA1107Q9UPP5 1409 aa1.8□□□□□ -2.12
SQLE-204ENST00000520493 ACACBO00763 2458 aa1.8□□□□□ -2.12
SQLE-204ENST00000520493 TLN1Q9Y490 2541 aaKnown RBP1.8□□□□□ -2.12
SQLE-204ENST00000520493 COL4A5P29400 1685 aa1.8□□□□□ -2.12
SQLE-204ENST00000520493 ZFHX3Q15911 3703 aa1.79□□□□□ -2.12
SQLE-204ENST00000520493 LYRM1O43325 122 aa1.79□□□□□ -2.12
SQLE-204ENST00000520493 DPM2O94777 84 aa1.79□□□□□ -2.12
SQLE-204ENST00000520493 TNFSF15O95150 251 aa1.79□□□□□ -2.12
SQLE-204ENST00000520493 CKS1BP61024 79 aa1.79□□□□□ -2.12
SQLE-204ENST00000520493 FAM216BQ8N7L0 139 aa1.79□□□□□ -2.12
SQLE-204ENST00000520493 OR4B1Q8NGF8 309 aa1.79□□□□□ -2.12
SQLE-204ENST00000520493 OR2T35Q8NGX2 323 aa1.79□□□□□ -2.12
SQLE-204ENST00000520493 RNASE11Q8TAA1 199 aaKnown RBP1.79□□□□□ -2.12
SQLE-204ENST00000520493 DIRC1Q969H9 104 aa1.79□□□□□ -2.12
SQLE-204ENST00000520493 TCEAL4Q96EI5 215 aa1.79□□□□□ -2.12
SQLE-204ENST00000520493 ZC2HC1AQ96GY0 325 aa1.79□□□□□ -2.12
SQLE-204ENST00000520493 CBLN4Q9NTU7 201 aa1.79□□□□□ -2.12
SQLE-204ENST00000520493 TCOF1Q13428 1488 aaKnown RBP1.79□□□□□ -2.12
SQLE-204ENST00000520493 MYO5AQ9Y4I1 1855 aaKnown RBP1.79□□□□□ -2.12
SQLE-204ENST00000520493 CEP295Q9C0D2 2601 aa1.79□□□□□ -2.12
SQLE-204ENST00000520493 BRWD1Q9NSI6 2320 aa1.78□□□□□ -2.12
SQLE-204ENST00000520493 RTTNQ86VV8 2226 aa1.78□□□□□ -2.12
SQLE-204ENST00000520493 MYLKQ15746 1914 aa1.78□□□□□ -2.12
SQLE-204ENST00000520493 TRAV13-1A0A0B4J241 112 aa1.78□□□□□ -2.12
SQLE-204ENST00000520493 C2orf70A6NJV1 201 aa1.78□□□□□ -2.12
SQLE-204ENST00000520493 C9JAW5 83 aa1.78□□□□□ -2.12
SQLE-204ENST00000520493 H3BMG7 143 aa1.78□□□□□ -2.12
SQLE-204ENST00000520493 IGLV1-51P01701 117 aa1.78□□□□□ -2.12
SQLE-204ENST00000520493 RPL22P35268 128 aaKnown RBP1.78□□□□□ -2.12
SQLE-204ENST00000520493 DSCR4P56555 118 aaPredicted RBP1.78□□□□□ -2.12
SQLE-204ENST00000520493 MRPS36P82909 103 aaKnown RBP1.78□□□□□ -2.12
SQLE-204ENST00000520493 SMIM21Q3B7S5 101 aa1.78□□□□□ -2.12
SQLE-204ENST00000520493 RPS19BP1Q86WX3 136 aaKnown RBP1.78□□□□□ -2.12
SQLE-204ENST00000520493 TCTE3Q8IZS6 198 aa1.78□□□□□ -2.12
SQLE-204ENST00000520493 OR5H6Q8NGV6 325 aa1.78□□□□□ -2.12
SQLE-204ENST00000520493 TMEM254Q8TBM7 123 aa1.78□□□□□ -2.12
SQLE-204ENST00000520493 NAT14Q8WUY8 206 aa1.78□□□□□ -2.12
SQLE-204ENST00000520493 SFT2D1Q8WV19 159 aa1.78□□□□□ -2.12
SQLE-204ENST00000520493 POP5Q969H6 163 aaKnown RBP1.78□□□□□ -2.12
SQLE-204ENST00000520493 PRELID3AQ96N28 172 aa1.78□□□□□ -2.12
SQLE-204ENST00000520493 OR5AC2Q9NZP5 309 aa1.78□□□□□ -2.12
SQLE-204ENST00000520493 HIGD1AQ9Y241 93 aa1.78□□□□□ -2.12
SQLE-204ENST00000520493 CREBBPQ92793 2442 aa1.78□□□□□ -2.12
SQLE-204ENST00000520493 LRRC7Q96NW7 1537 aa1.77□□□□□ -2.13
SQLE-204ENST00000520493 HTTP42858 3142 aa1.77□□□□□ -2.13
SQLE-204ENST00000520493 A0A087WSZ3 146 aa1.77□□□□□ -2.13
SQLE-204ENST00000520493 E7EUB6 86 aa1.77□□□□□ -2.13
SQLE-204ENST00000520493 OR2H2O95918 312 aa1.77□□□□□ -2.13
SQLE-204ENST00000520493 CRPP02741 224 aa1.77□□□□□ -2.13
SQLE-204ENST00000520493 MT-ND6P03923 174 aa1.77□□□□□ -2.13
SQLE-204ENST00000520493 SDC4P31431 198 aa1.77□□□□□ -2.13
SQLE-204ENST00000520493 ZNF93P35789 620 aaPredicted RBP1.77□□□□□ -2.13
SQLE-204ENST00000520493 KRTAP6-3Q3LI67 103 aa1.77□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms