RNA–Protein interactions for RNA: ENST00000516850.1

RNU6-1088P-201, Transcript of RNA, U6 small nuclear 1088, pseudogene, humanhuman

BASIC

Gene RNU6-1088P, Length 104 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1088P-201ENST00000516850 HUWE1Q7Z6Z7 4374 aaKnown RBP-1.09□□□□□ -2.58
RNU6-1088P-201ENST00000516850 TRBV19A0A075B6N1 114 aa-1.09□□□□□ -2.58
RNU6-1088P-201ENST00000516850 A0A1W2PRS3 328 aa-1.09□□□□□ -2.58
RNU6-1088P-201ENST00000516850 GOLT1AQ6ZVE7 132 aa-1.09□□□□□ -2.58
RNU6-1088P-201ENST00000516850 IFT20Q8IY31 132 aa-1.09□□□□□ -2.58
RNU6-1088P-201ENST00000516850 SREK1IP1Q8N9Q2 155 aaPredicted RBP-1.09□□□□□ -2.58
RNU6-1088P-201ENST00000516850 ENY2Q9NPA8 101 aa-1.09□□□□□ -2.58
RNU6-1088P-201ENST00000516850 ANK1P16157 1881 aa-1.09□□□□□ -2.58
RNU6-1088P-201ENST00000516850 DUXBA0A1W2PPF3 345 aa-1.1□□□□□ -2.59
RNU6-1088P-201ENST00000516850 IFNA7P01567 189 aa-1.1□□□□□ -2.59
RNU6-1088P-201ENST00000516850 IFNA4P05014 189 aa-1.1□□□□□ -2.59
RNU6-1088P-201ENST00000516850 HIST1H3AP68431 136 aa-1.1□□□□□ -2.59
RNU6-1088P-201ENST00000516850 H3F3AP84243 136 aa-1.1□□□□□ -2.59
RNU6-1088P-201ENST00000516850 FXYD3Q14802 87 aa-1.1□□□□□ -2.59
RNU6-1088P-201ENST00000516850 NEDD8Q15843 81 aa-1.1□□□□□ -2.59
RNU6-1088P-201ENST00000516850 GNPDA2Q8TDQ7 276 aa-1.1□□□□□ -2.59
RNU6-1088P-201ENST00000516850 PRR15LQ9BU68 103 aa-1.1□□□□□ -2.59
RNU6-1088P-201ENST00000516850 CACYBPQ9HB71 228 aaKnown RBP-1.1□□□□□ -2.59
RNU6-1088P-201ENST00000516850 CHD9Q3L8U1 2897 aa-1.1□□□□□ -2.59
RNU6-1088P-201ENST00000516850 TRPM1Q7Z4N2 1603 aa-1.11□□□□□ -2.59
RNU6-1088P-201ENST00000516850 LAMC3Q9Y6N6 1575 aa-1.11□□□□□ -2.59
RNU6-1088P-201ENST00000516850 DOPEY2Q9Y3R5 2298 aa-1.11□□□□□ -2.59
RNU6-1088P-201ENST00000516850 A0A087WUJ7 227 aa-1.11□□□□□ -2.59
RNU6-1088P-201ENST00000516850 TCRBP04435 133 aa-1.11□□□□□ -2.59
RNU6-1088P-201ENST00000516850 TPM3P06753 285 aa-1.11□□□□□ -2.59
RNU6-1088P-201ENST00000516850 SNRPD3P62318 126 aaKnown RBP-1.11□□□□□ -2.59
RNU6-1088P-201ENST00000516850 DIAPH2-AS1Q14236 149 aa-1.11□□□□□ -2.59
RNU6-1088P-201ENST00000516850 EDDM3AQ14507 147 aa-1.11□□□□□ -2.59
RNU6-1088P-201ENST00000516850 IMPG1Q17R60 797 aa-1.11□□□□□ -2.59
RNU6-1088P-201ENST00000516850 VMA21Q3ZAQ7 101 aa-1.11□□□□□ -2.59
RNU6-1088P-201ENST00000516850 OTUD6BQ8N6M0 293 aa-1.11□□□□□ -2.59
RNU6-1088P-201ENST00000516850 DDI1Q8WTU0 396 aa-1.11□□□□□ -2.59
RNU6-1088P-201ENST00000516850 MAP1LC3BQ9GZQ8 125 aa-1.11□□□□□ -2.59
RNU6-1088P-201ENST00000516850 ATP6V1DQ9Y5K8 247 aa-1.11□□□□□ -2.59
RNU6-1088P-201ENST00000516850 KIAA1549LQ6ZVL6 1849 aa-1.11□□□□□ -2.59
RNU6-1088P-201ENST00000516850 PTPN13Q12923 2485 aa-1.11□□□□□ -2.59
RNU6-1088P-201ENST00000516850 DSPPQ9NZW4 1301 aa-1.12□□□□□ -2.59
RNU6-1088P-201ENST00000516850 GYPBP06028 91 aa-1.12□□□□□ -2.59
RNU6-1088P-201ENST00000516850 ATP5G3P48201 142 aa-1.12□□□□□ -2.59
RNU6-1088P-201ENST00000516850 KRTAP19-7Q3SYF9 63 aa-1.12□□□□□ -2.59
RNU6-1088P-201ENST00000516850 PPTC7Q8NI37 304 aa-1.12□□□□□ -2.59
RNU6-1088P-201ENST00000516850 PRELID3BQ9Y3B1 194 aa-1.12□□□□□ -2.59
RNU6-1088P-201ENST00000516850 NCAPD3P42695 1498 aa-1.12□□□□□ -2.59
RNU6-1088P-201ENST00000516850 FAM25EA8MYX2 175 aa-1.13□□□□□ -2.59
RNU6-1088P-201ENST00000516850 PIAS1O75925 651 aa-1.13□□□□□ -2.59
RNU6-1088P-201ENST00000516850 CFDP00746 253 aaPredicted RBP-1.13□□□□□ -2.59
RNU6-1088P-201ENST00000516850 ZCCHC23Q6ZST2 131 aa-1.13□□□□□ -2.59
RNU6-1088P-201ENST00000516850 C5orf56Q8N8D9 126 aa-1.13□□□□□ -2.59
RNU6-1088P-201ENST00000516850 PARVBQ9HBI1 364 aa-1.13□□□□□ -2.59
RNU6-1088P-201ENST00000516850 MRPL35Q9NZE8 188 aaKnown RBP-1.13□□□□□ -2.59
RNU6-1088P-201ENST00000516850 SMIM23A6NLE4 172 aa-1.14□□□□□ -2.59
RNU6-1088P-201ENST00000516850 RER1O15258 196 aa-1.14□□□□□ -2.59
RNU6-1088P-201ENST00000516850 IDO1P14902 403 aa-1.14□□□□□ -2.59
RNU6-1088P-201ENST00000516850 SPRR2DP22532 72 aa-1.14□□□□□ -2.59
RNU6-1088P-201ENST00000516850 NFYBP25208 207 aa-1.14□□□□□ -2.59
RNU6-1088P-201ENST00000516850 TPM4P67936 248 aa-1.14□□□□□ -2.59
RNU6-1088P-201ENST00000516850 TRAPPC5Q8IUR0 188 aa-1.14□□□□□ -2.59
RNU6-1088P-201ENST00000516850 TMEM14BQ9NUH8 114 aa-1.14□□□□□ -2.59
RNU6-1088P-201ENST00000516850 TNXBP22105 4242 aa-1.14□□□□□ -2.59
RNU6-1088P-201ENST00000516850 NISCHQ9Y2I1 1504 aa-1.15□□□□□ -2.59
RNU6-1088P-201ENST00000516850 A0A096LNT2 108 aa-1.15□□□□□ -2.59
RNU6-1088P-201ENST00000516850 CRHP06850 196 aa-1.15□□□□□ -2.59
RNU6-1088P-201ENST00000516850 HACD4Q5VWC8 232 aa-1.15□□□□□ -2.59
RNU6-1088P-201ENST00000516850 TNS1Q9HBL0 1735 aaKnown RBP-1.15□□□□□ -2.59
RNU6-1088P-201ENST00000516850 SOGA1O94964 1423 aa-1.15□□□□□ -2.59
RNU6-1088P-201ENST00000516850 PIK3C2AO00443 1686 aa-1.16□□□□□ -2.59
RNU6-1088P-201ENST00000516850 MED13LQ71F56 2210 aa-1.16□□□□□ -2.59
RNU6-1088P-201ENST00000516850 NBDYA0A0U1RRE5 68 aa-1.16□□□□□ -2.6
RNU6-1088P-201ENST00000516850 MCRIP1C9JLW8 97 aa-1.16□□□□□ -2.6
RNU6-1088P-201ENST00000516850 M0QX08 132 aa-1.16□□□□□ -2.6
RNU6-1088P-201ENST00000516850 TMBIM6P55061 237 aa-1.16□□□□□ -2.6
RNU6-1088P-201ENST00000516850 ARPP19P56211 112 aa-1.16□□□□□ -2.6
RNU6-1088P-201ENST00000516850 TMEM97Q5BJF2 176 aa-1.16□□□□□ -2.6
RNU6-1088P-201ENST00000516850 CCDC42Q96M95 316 aa-1.16□□□□□ -2.6
RNU6-1088P-201ENST00000516850 EFCAB11Q9BUY7 163 aa-1.16□□□□□ -2.6
RNU6-1088P-201ENST00000516850 HECTD4Q9Y4D8 3996 aa-1.16□□□□□ -2.6
RNU6-1088P-201ENST00000516850 ABCA1O95477 2261 aa-1.17□□□□□ -2.6
RNU6-1088P-201ENST00000516850 LOC101927531A0A1B0GV80 90 aa-1.17□□□□□ -2.6
RNU6-1088P-201ENST00000516850 KLKP1Q107X0 134 aa-1.17□□□□□ -2.6
RNU6-1088P-201ENST00000516850 Q5XG85 94 aa-1.17□□□□□ -2.6
RNU6-1088P-201ENST00000516850 DEFB132Q7Z7B7 95 aa-1.17□□□□□ -2.6
RNU6-1088P-201ENST00000516850 NAT14Q8WUY8 206 aa-1.17□□□□□ -2.6
RNU6-1088P-201ENST00000516850 CTNNBIP1Q9NSA3 81 aaPredicted RBP-1.17□□□□□ -2.6
RNU6-1088P-201ENST00000516850 NINQ8N4C6 2090 aa-1.17□□□□□ -2.6
RNU6-1088P-201ENST00000516850 RREB1Q92766 1687 aa-1.18□□□□□ -2.6
RNU6-1088P-201ENST00000516850 HIGD1CA8MV81 97 aa-1.18□□□□□ -2.6
RNU6-1088P-201ENST00000516850 K7ERJ3 54 aa-1.18□□□□□ -2.6
RNU6-1088P-201ENST00000516850 HIST1H2BKO60814 126 aa-1.18□□□□□ -2.6
RNU6-1088P-201ENST00000516850 BANF1O75531 89 aa-1.18□□□□□ -2.6
RNU6-1088P-201ENST00000516850 ATP5HO75947 161 aa-1.18□□□□□ -2.6
RNU6-1088P-201ENST00000516850 HIST1H2BJP06899 126 aa-1.18□□□□□ -2.6
RNU6-1088P-201ENST00000516850 MPC1LP0DKB6 136 aa-1.18□□□□□ -2.6
RNU6-1088P-201ENST00000516850 LINC00269Q8N2A0 174 aa-1.18□□□□□ -2.6
RNU6-1088P-201ENST00000516850 FAM216BQ8N7L0 139 aa-1.18□□□□□ -2.6
RNU6-1088P-201ENST00000516850 BTF3L4Q96K17 158 aa-1.18□□□□□ -2.6
RNU6-1088P-201ENST00000516850 DSCR8Q96T75 97 aa-1.18□□□□□ -2.6
RNU6-1088P-201ENST00000516850 BIN3Q9NQY0 253 aa-1.18□□□□□ -2.6
RNU6-1088P-201ENST00000516850 FRMPD1Q5SYB0 1578 aa-1.18□□□□□ -2.6
RNU6-1088P-201ENST00000516850 HMGB3O15347 200 aaKnown RBP-1.19□□□□□ -2.6
RNU6-1088P-201ENST00000516850 CXCL1P09341 107 aa-1.19□□□□□ -2.6
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms