RNA–Protein interactions for RNA: ENST00000507823.5

SFXN1-208, Transcript of sideroflexin 1, humanhuman

TSL 2

Gene SFXN1, Length 2,611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-208ENST00000507823 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.59□□□□□ -0.23
SFXN1-208ENST00000507823 A8MWP6 167 aa13.59□□□□□ -0.23
SFXN1-208ENST00000507823 SAPCD1Q5SSQ6 148 aa13.59□□□□□ -0.23
SFXN1-208ENST00000507823 IGHV3OR16-8A0A075B7F1 116 aa13.59□□□□□ -0.23
SFXN1-208ENST00000507823 F2Z2F3 143 aa13.59□□□□□ -0.23
SFXN1-208ENST00000507823 BLCAPP62952 87 aa13.59□□□□□ -0.23
SFXN1-208ENST00000507823 KLF5Q13887 457 aaPredicted RBP13.59□□□□□ -0.23
SFXN1-208ENST00000507823 KIAA1644Q3SXP7 199 aa13.59□□□□□ -0.23
SFXN1-208ENST00000507823 GATD1Q8NB37 220 aa13.59□□□□□ -0.23
SFXN1-208ENST00000507823 MRPL53Q96EL3 112 aaKnown RBP13.59□□□□□ -0.23
SFXN1-208ENST00000507823 RBAKDNA6NC62 111 aa13.58□□□□□ -0.24
SFXN1-208ENST00000507823 HAX1O00165 279 aa13.58□□□□□ -0.24
SFXN1-208ENST00000507823 SRIP30626 198 aa13.58□□□□□ -0.24
SFXN1-208ENST00000507823 BAGE3Q86Y29 109 aa13.58□□□□□ -0.24
SFXN1-208ENST00000507823 UTP20O75691 2785 aaKnown RBP13.58□□□□□ -0.24
SFXN1-208ENST00000507823 TPPP2P59282 170 aa13.58□□□□□ -0.24
SFXN1-208ENST00000507823 KRTAP10-9P60411 292 aa13.58□□□□□ -0.24
SFXN1-208ENST00000507823 C9orf139Q6ZV77 190 aa13.58□□□□□ -0.24
SFXN1-208ENST00000507823 PRR25Q96S07 402 aa13.58□□□□□ -0.24
SFXN1-208ENST00000507823 CELSR2Q9HCU4 2923 aa13.57□□□□□ -0.24
SFXN1-208ENST00000507823 IGKV2-40A0A087WW87 121 aaPredicted RBP13.57□□□□□ -0.24
SFXN1-208ENST00000507823 NDUFA4O00483 81 aa13.57□□□□□ -0.24
SFXN1-208ENST00000507823 IGKV2D-40P01614 121 aaPredicted RBP13.57□□□□□ -0.24
SFXN1-208ENST00000507823 LCN12Q6JVE5 192 aa13.57□□□□□ -0.24
SFXN1-208ENST00000507823 PGLYRP4Q96LB8 373 aa13.57□□□□□ -0.24
SFXN1-208ENST00000507823 C8orf49Q96NF6 230 aa13.57□□□□□ -0.24
SFXN1-208ENST00000507823 ANKRD17O75179 2603 aaKnown RBP13.57□□□□□ -0.24
SFXN1-208ENST00000507823 ARL3P36405 182 aa13.57□□□□□ -0.24
SFXN1-208ENST00000507823 DEFB113Q30KQ7 82 aa13.57□□□□□ -0.24
SFXN1-208ENST00000507823 CRYBG3Q68DQ2 2970 aa13.57□□□□□ -0.24
SFXN1-208ENST00000507823 Q6ZS46 218 aa13.57□□□□□ -0.24
SFXN1-208ENST00000507823 DEFB112Q30KQ8 113 aa13.56□□□□□ -0.24
SFXN1-208ENST00000507823 Q6AWC8 147 aa13.56□□□□□ -0.24
SFXN1-208ENST00000507823 C18orf32Q8TCD1 76 aa13.56□□□□□ -0.24
SFXN1-208ENST00000507823 ALKBH7Q9BT30 221 aaPredicted RBP13.56□□□□□ -0.24
SFXN1-208ENST00000507823 CT45A10P0DMU9 189 aa13.56□□□□□ -0.24
SFXN1-208ENST00000507823 HLA-DMBP28068 263 aa13.56□□□□□ -0.24
SFXN1-208ENST00000507823 GLMPQ8WWB7 406 aa13.56□□□□□ -0.24
SFXN1-208ENST00000507823 ZFHX3Q15911 3703 aa13.55□□□□□ -0.24
SFXN1-208ENST00000507823 CR1P17927 2039 aa13.55□□□□□ -0.24
SFXN1-208ENST00000507823 LINC00587B1AMM8 73 aa13.55□□□□□ -0.24
SFXN1-208ENST00000507823 IGHV4-31P0DP07 118 aa13.55□□□□□ -0.24
SFXN1-208ENST00000507823 SRSF2Q01130 221 aaKnown RBP13.55□□□□□ -0.24
SFXN1-208ENST00000507823 EPG5Q9HCE0 2579 aa13.55□□□□□ -0.24
SFXN1-208ENST00000507823 TRAV8-2A0A0B4J237 113 aa13.55□□□□□ -0.24
SFXN1-208ENST00000507823 CAMPP49913 170 aa13.55□□□□□ -0.24
SFXN1-208ENST00000507823 VGLL1Q99990 258 aa13.55□□□□□ -0.24
SFXN1-208ENST00000507823 A0A1B0GW15 77 aa13.54□□□□□ -0.24
SFXN1-208ENST00000507823 TGFAP01135 160 aa13.54□□□□□ -0.24
SFXN1-208ENST00000507823 FAM162BQ5T6X4 162 aa13.54□□□□□ -0.24
SFXN1-208ENST00000507823 KCNS1Q96KK3 526 aa13.54□□□□□ -0.24
SFXN1-208ENST00000507823 ASCL2Q99929 193 aa13.54□□□□□ -0.24
SFXN1-208ENST00000507823 KLK15Q9H2R5 256 aa13.54□□□□□ -0.24
SFXN1-208ENST00000507823 CLEC5AQ9NY25 188 aa13.54□□□□□ -0.24
SFXN1-208ENST00000507823 PRRC2AP48634 2157 aaKnown RBP13.54□□□□□ -0.24
SFXN1-208ENST00000507823 CELSR1Q9NYQ6 3014 aa13.54□□□□□ -0.24
SFXN1-208ENST00000507823 GPX1P07203 203 aa13.54□□□□□ -0.24
SFXN1-208ENST00000507823 RCHY1Q96PM5 261 aa13.54□□□□□ -0.24
SFXN1-208ENST00000507823 A0A0G2JLM5 398 aa13.53□□□□□ -0.24
SFXN1-208ENST00000507823 SH2D1AO60880 128 aa13.53□□□□□ -0.24
SFXN1-208ENST00000507823 TRBV12-3P01733 135 aa13.53□□□□□ -0.24
SFXN1-208ENST00000507823 IGHV4-59P01825 116 aa13.53□□□□□ -0.24
SFXN1-208ENST00000507823 IQCJQ1A5X6 159 aa13.53□□□□□ -0.24
SFXN1-208ENST00000507823 IGFL4Q6B9Z1 124 aa13.53□□□□□ -0.24
SFXN1-208ENST00000507823 Q6ZWC4 215 aa13.53□□□□□ -0.24
SFXN1-208ENST00000507823 PSMG3-AS1Q96PY0 264 aa13.53□□□□□ -0.24
SFXN1-208ENST00000507823 A0A1W2PS18 150 aa13.53□□□□□ -0.24
SFXN1-208ENST00000507823 TMEM89A2RUT3 159 aa13.53□□□□□ -0.24
SFXN1-208ENST00000507823 ZNF705FA8MVS1 300 aaPredicted RBP13.53□□□□□ -0.24
SFXN1-208ENST00000507823 RNF223E7ERA6 249 aa13.53□□□□□ -0.24
SFXN1-208ENST00000507823 SSBP4Q9BWG4 385 aaPredicted RBP13.53□□□□□ -0.24
SFXN1-208ENST00000507823 A0A1B0GUT8 65 aa13.52□□□□□ -0.24
SFXN1-208ENST00000507823 FAM209BQ5JX69 171 aa13.52□□□□□ -0.24
SFXN1-208ENST00000507823 PPP1R14DQ9NXH3 145 aa13.52□□□□□ -0.24
SFXN1-208ENST00000507823 CSPG4Q6UVK1 2322 aa13.52□□□□□ -0.25
SFXN1-208ENST00000507823 PRSS57Q6UWY2 283 aa13.52□□□□□ -0.25
SFXN1-208ENST00000507823 C8orf86Q6ZUL3 223 aa13.52□□□□□ -0.25
SFXN1-208ENST00000507823 PTPN13Q12923 2485 aa13.52□□□□□ -0.25
SFXN1-208ENST00000507823 USP9YO00507 2555 aaPredicted RBP13.51□□□□□ -0.25
SFXN1-208ENST00000507823 IGHV3-66A0A0C4DH42 116 aa13.51□□□□□ -0.25
SFXN1-208ENST00000507823 PRAC2D3DTV9 90 aa13.51□□□□□ -0.25
SFXN1-208ENST00000507823 PKIAP61925 76 aa13.51□□□□□ -0.25
SFXN1-208ENST00000507823 UNQ9165/PRO28630Q6UXU0 137 aa13.51□□□□□ -0.25
SFXN1-208ENST00000507823 ZNF207O43670 478 aaKnown RBP13.51□□□□□ -0.25
SFXN1-208ENST00000507823 PRB4P10163 310 aaPredicted RBP13.51□□□□□ -0.25
SFXN1-208ENST00000507823 PF4V1P10720 104 aa13.51□□□□□ -0.25
SFXN1-208ENST00000507823 BMI1P35226 326 aa13.51□□□□□ -0.25
SFXN1-208ENST00000507823 RIGQ13278 110 aa13.51□□□□□ -0.25
SFXN1-208ENST00000507823 NDFIP1Q9BT67 221 aa13.51□□□□□ -0.25
SFXN1-208ENST00000507823 RPS20P60866 119 aaKnown RBP13.5□□□□□ -0.25
SFXN1-208ENST00000507823 Q5PR19 223 aa13.5□□□□□ -0.25
SFXN1-208ENST00000507823 KRTAP1-3Q8IUG1 177 aa13.5□□□□□ -0.25
SFXN1-208ENST00000507823 OR4X2Q8NGF9 303 aa13.5□□□□□ -0.25
SFXN1-208ENST00000507823 TMEM189A5PLL7 270 aa13.5□□□□□ -0.25
SFXN1-208ENST00000507823 ZNF324O75467 553 aaPredicted RBP13.5□□□□□ -0.25
SFXN1-208ENST00000507823 PSMB8P28062 276 aa13.5□□□□□ -0.25
SFXN1-208ENST00000507823 ZNF80P51504 273 aaPredicted RBP13.5□□□□□ -0.25
SFXN1-208ENST00000507823 ZNF575Q86XF7 245 aa13.5□□□□□ -0.25
SFXN1-208ENST00000507823 Q8TAT8 98 aa13.5□□□□□ -0.25
SFXN1-208ENST00000507823 LOC102724200A0A096LPH7 203 aaPredicted RBP13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms