RNA–Protein interactions for RNA: ENST00000488914.1

CTNNB1-215, Transcript of catenin beta 1, human

TSL 2

Gene CTNNB1, Length 804 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTNNB1-215	ENST00000488914	TIFAB	Q6ZNK6	161 aa		3.36	□□□□□ -1.87
CTNNB1-215	ENST00000488914	AMN1	Q8IY45	258 aa		3.36	□□□□□ -1.87
CTNNB1-215	ENST00000488914	C3orf56	Q8N813	242 aa		3.36	□□□□□ -1.87
CTNNB1-215	ENST00000488914	FGF13	Q92913	245 aa		3.36	□□□□□ -1.87
CTNNB1-215	ENST00000488914	B9D2	Q9BPU9	175 aa		3.36	□□□□□ -1.87
CTNNB1-215	ENST00000488914	HHLA3	Q9XRX5	114 aa		3.36	□□□□□ -1.87
CTNNB1-215	ENST00000488914	CCDC88A	Q3V6T2	1871 aa		3.36	□□□□□ -1.87
CTNNB1-215	ENST00000488914	NLRC5	Q86WI3	1866 aa		3.36	□□□□□ -1.87
CTNNB1-215	ENST00000488914	FANCM	Q8IYD8	2048 aa		3.36	□□□□□ -1.87
CTNNB1-215	ENST00000488914	MARF1	Q9Y4F3	1742 aa	Known RBP	3.36	□□□□□ -1.87
CTNNB1-215	ENST00000488914	RPRD2	Q5VT52	1461 aa	Known RBP	3.35	□□□□□ -1.87
CTNNB1-215	ENST00000488914	NUP210L	Q5VU65	1888 aa		3.35	□□□□□ -1.87
CTNNB1-215	ENST00000488914	IGLV8-61	A0A075B6I0	122 aa		3.35	□□□□□ -1.87
CTNNB1-215	ENST00000488914	IGHV3-72	A0A0B4J1Y9	119 aa		3.35	□□□□□ -1.87
CTNNB1-215	ENST00000488914	IGHV1OR15-9	A0A0B4J2B8	117 aa		3.35	□□□□□ -1.87
CTNNB1-215	ENST00000488914	IGKV1-6	A0A0C4DH72	117 aa		3.35	□□□□□ -1.87
CTNNB1-215	ENST00000488914	ATOX1	O00244	68 aa		3.35	□□□□□ -1.87
CTNNB1-215	ENST00000488914	LEPROT	O15243	131 aa		3.35	□□□□□ -1.87
CTNNB1-215	ENST00000488914	IGKV1-16	P04430	117 aa		3.35	□□□□□ -1.87
CTNNB1-215	ENST00000488914	CD28	P10747	220 aa		3.35	□□□□□ -1.87
CTNNB1-215	ENST00000488914	FAU	P35544	74 aa	Known RBP	3.35	□□□□□ -1.87
CTNNB1-215	ENST00000488914	NOXRED1	Q6NXP6	359 aa		3.35	□□□□□ -1.87
CTNNB1-215	ENST00000488914	LYPD2	Q6UXB3	125 aa		3.35	□□□□□ -1.87
CTNNB1-215	ENST00000488914	ATP11AUN	Q6ZP68	121 aa		3.35	□□□□□ -1.87
CTNNB1-215	ENST00000488914	MIR17HG	Q75NE6	70 aa		3.35	□□□□□ -1.87
CTNNB1-215	ENST00000488914	C5orf38	Q86SI9	138 aa		3.35	□□□□□ -1.87
CTNNB1-215	ENST00000488914	ORMDL3	Q8N138	153 aa		3.35	□□□□□ -1.87
CTNNB1-215	ENST00000488914	FAM216B	Q8N7L0	139 aa		3.35	□□□□□ -1.87
CTNNB1-215	ENST00000488914	NPB	Q8NG41	125 aa		3.35	□□□□□ -1.87
CTNNB1-215	ENST00000488914	C18orf32	Q8TCD1	76 aa		3.35	□□□□□ -1.87
CTNNB1-215	ENST00000488914	AMELY	Q99218	206 aa		3.35	□□□□□ -1.87
CTNNB1-215	ENST00000488914	TAS2R4	Q9NYW5	299 aa		3.35	□□□□□ -1.87
CTNNB1-215	ENST00000488914	CIT	O14578	2027 aa		3.35	□□□□□ -1.87
CTNNB1-215	ENST00000488914	C10orf71	Q711Q0	1435 aa		3.35	□□□□□ -1.87
CTNNB1-215	ENST00000488914	PXDN	Q92626	1479 aa		3.35	□□□□□ -1.87
CTNNB1-215	ENST00000488914	DENND4C	Q5VZ89	1909 aa		3.34	□□□□□ -1.87
CTNNB1-215	ENST00000488914	DIP2B	Q9P265	1576 aa		3.34	□□□□□ -1.87
CTNNB1-215	ENST00000488914	TRBV24-1	A0A075B6N3	115 aa		3.34	□□□□□ -1.87
CTNNB1-215	ENST00000488914	SYS1-DBNDD2	H3BUS1	97 aa		3.34	□□□□□ -1.87
CTNNB1-215	ENST00000488914	TIMM17B	O60830	172 aa		3.34	□□□□□ -1.87
CTNNB1-215	ENST00000488914	FUS	P35637	526 aa	Known RBP eCLIP	3.34	□□□□□ -1.87
CTNNB1-215	ENST00000488914	RPL27A	P46776	148 aa	Known RBP	3.34	□□□□□ -1.87
CTNNB1-215	ENST00000488914	C15orf32	Q32M92	178 aa		3.34	□□□□□ -1.87
CTNNB1-215	ENST00000488914	ETDB	Q3ZM63	59 aa		3.34	□□□□□ -1.87
CTNNB1-215	ENST00000488914	FAM104B	Q5XKR9	115 aa		3.34	□□□□□ -1.87
CTNNB1-215	ENST00000488914	PATE2	Q6UY27	113 aa		3.34	□□□□□ -1.87
CTNNB1-215	ENST00000488914	KRTAP5-5	Q701N2	237 aa	Predicted RBP	3.34	□□□□□ -1.87
CTNNB1-215	ENST00000488914	KRTAP11-1	Q8IUC1	163 aa		3.34	□□□□□ -1.87
CTNNB1-215	ENST00000488914		Q8N7P7	452 aa		3.34	□□□□□ -1.87
CTNNB1-215	ENST00000488914	FAM213B	Q8TBF2	198 aa		3.34	□□□□□ -1.87
CTNNB1-215	ENST00000488914	MGST2	Q99735	147 aa		3.34	□□□□□ -1.87
CTNNB1-215	ENST00000488914	CHCHD5	Q9BSY4	110 aa		3.34	□□□□□ -1.87
CTNNB1-215	ENST00000488914	FGF23	Q9GZV9	251 aa	Predicted RBP	3.34	□□□□□ -1.87
CTNNB1-215	ENST00000488914	CELA1	Q9UNI1	258 aa		3.34	□□□□□ -1.87
CTNNB1-215	ENST00000488914	LY96	Q9Y6Y9	160 aa		3.34	□□□□□ -1.87
CTNNB1-215	ENST00000488914	CHD4	Q14839	1912 aa		3.34	□□□□□ -1.88
CTNNB1-215	ENST00000488914	EFCAB5	A4FU69	1503 aa		3.34	□□□□□ -1.88
CTNNB1-215	ENST00000488914	URB2	Q14146	1524 aa	Known RBP	3.34	□□□□□ -1.88
CTNNB1-215	ENST00000488914	LOXHD1	Q8IVV2	1947 aa		3.33	□□□□□ -1.88
CTNNB1-215	ENST00000488914	MYH9	P35579	1960 aa	Known RBP	3.33	□□□□□ -1.88
CTNNB1-215	ENST00000488914	CROCC	Q5TZA2	2017 aa		3.33	□□□□□ -1.88
CTNNB1-215	ENST00000488914	IGHV3-43	A0A0B4J1X8	118 aa		3.33	□□□□□ -1.88
CTNNB1-215	ENST00000488914	TRAV1-1	A0A0B4J248	108 aa		3.33	□□□□□ -1.88
CTNNB1-215	ENST00000488914	IGHV3-35	A0A0C4DH35	117 aa		3.33	□□□□□ -1.88
CTNNB1-215	ENST00000488914	MUC21	A0A140T8X8	626 aa		3.33	□□□□□ -1.88
CTNNB1-215	ENST00000488914	ZNF737	O75373	536 aa		3.33	□□□□□ -1.88
CTNNB1-215	ENST00000488914	SFTA3	P0C7M3	94 aa		3.33	□□□□□ -1.88
CTNNB1-215	ENST00000488914	SAA1	P0DJI8	122 aa	Predicted RBP	3.33	□□□□□ -1.88
CTNNB1-215	ENST00000488914	NPPC	P23582	126 aa		3.33	□□□□□ -1.88
CTNNB1-215	ENST00000488914	CCL8	P80075	99 aa		3.33	□□□□□ -1.88
CTNNB1-215	ENST00000488914	CIRBP	Q14011	172 aa	Known RBP	3.33	□□□□□ -1.88
CTNNB1-215	ENST00000488914	WFDC2	Q14508	124 aa		3.33	□□□□□ -1.88
CTNNB1-215	ENST00000488914	ELOB	Q15370	118 aa		3.33	□□□□□ -1.88
CTNNB1-215	ENST00000488914	ASB16-AS1	Q495Z4	193 aa		3.33	□□□□□ -1.88
CTNNB1-215	ENST00000488914	HIGD2B	Q4VC39	106 aa		3.33	□□□□□ -1.88
CTNNB1-215	ENST00000488914	NMS	Q5H8A3	153 aa		3.33	□□□□□ -1.88
CTNNB1-215	ENST00000488914	KRTAP5-2	Q701N4	177 aa		3.33	□□□□□ -1.88
CTNNB1-215	ENST00000488914	SPATA12	Q7Z6I5	190 aa		3.33	□□□□□ -1.88
CTNNB1-215	ENST00000488914	C7orf33	Q8WU49	177 aa		3.33	□□□□□ -1.88
CTNNB1-215	ENST00000488914	SPTSSA	Q969W0	71 aa		3.33	□□□□□ -1.88
CTNNB1-215	ENST00000488914	ZNF222	Q9UK12	451 aa		3.33	□□□□□ -1.88
CTNNB1-215	ENST00000488914	IQSEC2	Q5JU85	1478 aa		3.33	□□□□□ -1.88
CTNNB1-215	ENST00000488914	SYCP2	Q9BX26	1530 aa		3.33	□□□□□ -1.88
CTNNB1-215	ENST00000488914	KNDC1	Q76NI1	1749 aa		3.33	□□□□□ -1.88
CTNNB1-215	ENST00000488914	LTN1	O94822	1766 aa		3.33	□□□□□ -1.88
CTNNB1-215	ENST00000488914	ALPK3	Q96L96	1907 aa		3.32	□□□□□ -1.88
CTNNB1-215	ENST00000488914	CHD3	Q12873	2000 aa	Known RBP	3.32	□□□□□ -1.88
CTNNB1-215	ENST00000488914	KANTR	A0A1W2PQU2	76 aa		3.32	□□□□□ -1.88
CTNNB1-215	ENST00000488914	hADV29S1	A0JD25	119 aa		3.32	□□□□□ -1.88
CTNNB1-215	ENST00000488914	C3orf84	H3BNL1	204 aa		3.32	□□□□□ -1.88
CTNNB1-215	ENST00000488914		H3BUT2	72 aa		3.32	□□□□□ -1.88
CTNNB1-215	ENST00000488914	IGLV2-23	P01705	113 aa		3.32	□□□□□ -1.88
CTNNB1-215	ENST00000488914	TSPEAR-AS2	P59090	65 aa		3.32	□□□□□ -1.88
CTNNB1-215	ENST00000488914	SS18	Q15532	418 aa		3.32	□□□□□ -1.88
CTNNB1-215	ENST00000488914	CHCHD2P9	Q5T1J5	151 aa	Predicted RBP	3.32	□□□□□ -1.88
CTNNB1-215	ENST00000488914	SOSTDC1	Q6X4U4	206 aa		3.32	□□□□□ -1.88
CTNNB1-215	ENST00000488914	CAMK2N1	Q7Z7J9	78 aa		3.32	□□□□□ -1.88
CTNNB1-215	ENST00000488914	HMGN2P46	Q86SG4	172 aa		3.32	□□□□□ -1.88
CTNNB1-215	ENST00000488914		Q8N8P6	123 aa		3.32	□□□□□ -1.88
CTNNB1-215	ENST00000488914	CYTL1	Q9NRR1	136 aa		3.32	□□□□□ -1.88

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