RNA–Protein interactions for RNA: ENST00000488908.1

CCDC93-209, Transcript of coiled-coil domain containing 93, humanhuman

TSL 5

Gene CCDC93, Length 268 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-209ENST00000488908 H3F3AP84243 136 aa-0.49□□□□□ -2.49
CCDC93-209ENST00000488908 TMED1Q13445 227 aa-0.49□□□□□ -2.49
CCDC93-209ENST00000488908 XAF1Q6GPH4 301 aa-0.49□□□□□ -2.49
CCDC93-209ENST00000488908 LRRC18Q8N456 261 aa-0.49□□□□□ -2.49
CCDC93-209ENST00000488908 NPCDR1Q9BY65 106 aa-0.49□□□□□ -2.49
CCDC93-209ENST00000488908 IMUPQ9GZP8 106 aa-0.49□□□□□ -2.49
CCDC93-209ENST00000488908 UCK1Q9HA47 277 aa-0.49□□□□□ -2.49
CCDC93-209ENST00000488908 RNF213Q63HN8 5207 aa-0.49□□□□□ -2.49
CCDC93-209ENST00000488908 KIF1BO60333 1816 aa-0.5□□□□□ -2.49
CCDC93-209ENST00000488908 NCOR1O75376 2440 aa-0.5□□□□□ -2.49
CCDC93-209ENST00000488908 MAP1BP46821 2468 aaKnown RBP-0.5□□□□□ -2.49
CCDC93-209ENST00000488908 TRBV19A0A075B6N1 114 aa-0.5□□□□□ -2.49
CCDC93-209ENST00000488908 M0QX08 132 aa-0.5□□□□□ -2.49
CCDC93-209ENST00000488908 TAX1BP3O14907 124 aa-0.5□□□□□ -2.49
CCDC93-209ENST00000488908 IGHV3-30P01768 117 aa-0.5□□□□□ -2.49
CCDC93-209ENST00000488908 TPM3P06753 285 aa-0.5□□□□□ -2.49
CCDC93-209ENST00000488908 IGHV3-30-5P0DP03 117 aa-0.5□□□□□ -2.49
CCDC93-209ENST00000488908 EDDM3AQ14507 147 aa-0.5□□□□□ -2.49
CCDC93-209ENST00000488908 GLYATL3Q5SZD4 288 aa-0.5□□□□□ -2.49
CCDC93-209ENST00000488908 TMEM14EPQ6UXP3 125 aa-0.5□□□□□ -2.49
CCDC93-209ENST00000488908 CHCHD1Q96BP2 118 aaKnown RBP-0.5□□□□□ -2.49
CCDC93-209ENST00000488908 ZHX1-C8orf76Q96EF9 292 aa-0.5□□□□□ -2.49
CCDC93-209ENST00000488908 RNASE7Q9H1E1 156 aaKnown RBP-0.5□□□□□ -2.49
CCDC93-209ENST00000488908 POPDC3Q9HBV1 291 aa-0.5□□□□□ -2.49
CCDC93-209ENST00000488908 ATP6V1DQ9Y5K8 247 aa-0.5□□□□□ -2.49
CCDC93-209ENST00000488908 ATRQ13535 2644 aa-0.5□□□□□ -2.49
CCDC93-209ENST00000488908 LPAP08519 4548 aa-0.5□□□□□ -2.49
CCDC93-209ENST00000488908 MYO5AQ9Y4I1 1855 aaKnown RBP-0.5□□□□□ -2.49
CCDC93-209ENST00000488908 AKAP13Q12802 2813 aa-0.51□□□□□ -2.49
CCDC93-209ENST00000488908 HECTD4Q9Y4D8 3996 aa-0.51□□□□□ -2.49
CCDC93-209ENST00000488908 A0A087WUJ7 227 aa-0.51□□□□□ -2.49
CCDC93-209ENST00000488908 TRAV4A0A0B4J268 109 aa-0.51□□□□□ -2.49
CCDC93-209ENST00000488908 hDV103S1A0JD37 113 aa-0.51□□□□□ -2.49
CCDC93-209ENST00000488908 SMIM23A6NLE4 172 aa-0.51□□□□□ -2.49
CCDC93-209ENST00000488908 FXYD1O00168 92 aa-0.51□□□□□ -2.49
CCDC93-209ENST00000488908 TACC2O95359 2948 aa-0.51□□□□□ -2.49
CCDC93-209ENST00000488908 TCRBP04435 133 aa-0.51□□□□□ -2.49
CCDC93-209ENST00000488908 EVI2AP22794 236 aa-0.51□□□□□ -2.49
CCDC93-209ENST00000488908 ERP29P30040 261 aaKnown RBP-0.51□□□□□ -2.49
CCDC93-209ENST00000488908 DYNLT3P51808 116 aa-0.51□□□□□ -2.49
CCDC93-209ENST00000488908 NUP98P52948 1817 aa-0.51□□□□□ -2.49
CCDC93-209ENST00000488908 PATE2Q6UY27 113 aa-0.51□□□□□ -2.49
CCDC93-209ENST00000488908 MYO18BQ8IUG5 2567 aa-0.51□□□□□ -2.49
CCDC93-209ENST00000488908 OR4K15Q8NH41 348 aa-0.51□□□□□ -2.49
CCDC93-209ENST00000488908 GRPEL2Q8TAA5 225 aa-0.51□□□□□ -2.49
CCDC93-209ENST00000488908 GNPDA2Q8TDQ7 276 aa-0.51□□□□□ -2.49
CCDC93-209ENST00000488908 PARVBQ9HBI1 364 aa-0.51□□□□□ -2.49
CCDC93-209ENST00000488908 TNRC18O15417 2968 aaPredicted RBP-0.51□□□□□ -2.49
CCDC93-209ENST00000488908 PIK3C2GO75747 1445 aa-0.52□□□□□ -2.49
CCDC93-209ENST00000488908 MIA2Q96PC5 1412 aa-0.52□□□□□ -2.49
CCDC93-209ENST00000488908 C9orf170A2RU37 121 aa-0.52□□□□□ -2.49
CCDC93-209ENST00000488908 LYRM1O43325 122 aa-0.52□□□□□ -2.49
CCDC93-209ENST00000488908 IFNA7P01567 189 aa-0.52□□□□□ -2.49
CCDC93-209ENST00000488908 RPS3P23396 243 aaKnown RBP eCLIP-0.52□□□□□ -2.49
CCDC93-209ENST00000488908 DEFA3P59666 94 aa-0.52□□□□□ -2.49
CCDC93-209ENST00000488908 TPM4P67936 248 aa-0.52□□□□□ -2.49
CCDC93-209ENST00000488908 MIR22HGQ0VDD5 57 aa-0.52□□□□□ -2.49
CCDC93-209ENST00000488908 FOXI2Q6ZQN5 318 aa-0.52□□□□□ -2.49
CCDC93-209ENST00000488908 OTUD6BQ8N6M0 293 aa-0.52□□□□□ -2.49
CCDC93-209ENST00000488908 ZNF714Q96N38 554 aa-0.52□□□□□ -2.49
CCDC93-209ENST00000488908 LIMD2Q9BT23 127 aa-0.52□□□□□ -2.49
CCDC93-209ENST00000488908 PARD6GQ9BYG4 376 aaPredicted RBP-0.52□□□□□ -2.49
CCDC93-209ENST00000488908 MYO7AQ13402 2215 aa-0.53□□□□□ -2.49
CCDC93-209ENST00000488908 TMEM256-PLSCR3K7ERE1 68 aa-0.53□□□□□ -2.49
CCDC93-209ENST00000488908 CST8O60676 142 aa-0.53□□□□□ -2.49
CCDC93-209ENST00000488908 IFNA4P05014 189 aa-0.53□□□□□ -2.49
CCDC93-209ENST00000488908 SPRR2DP22532 72 aa-0.53□□□□□ -2.49
CCDC93-209ENST00000488908 RBM3P98179 157 aaKnown RBP-0.53□□□□□ -2.49
CCDC93-209ENST00000488908 KLRD1Q13241 179 aa-0.53□□□□□ -2.49
CCDC93-209ENST00000488908 IMPG1Q17R60 797 aa-0.53□□□□□ -2.49
CCDC93-209ENST00000488908 TRAPPC5Q8IUR0 188 aa-0.53□□□□□ -2.49
CCDC93-209ENST00000488908 ARL5BQ96KC2 179 aa-0.53□□□□□ -2.49
CCDC93-209ENST00000488908 CST11Q9H112 138 aa-0.53□□□□□ -2.49
CCDC93-209ENST00000488908 CACYBPQ9HB71 228 aaKnown RBP-0.53□□□□□ -2.49
CCDC93-209ENST00000488908 PRELID3BQ9Y3B1 194 aa-0.53□□□□□ -2.49
CCDC93-209ENST00000488908 MYCBP2O75592 4640 aa-0.53□□□□□ -2.49
CCDC93-209ENST00000488908 CHD8Q9HCK8 2581 aa-0.53□□□□□ -2.5
CCDC93-209ENST00000488908 SPTBN2O15020 2390 aa-0.54□□□□□ -2.5
CCDC93-209ENST00000488908 COL6A5A8TX70 2615 aa-0.54□□□□□ -2.5
CCDC93-209ENST00000488908 SERPINB9P50453 376 aa-0.54□□□□□ -2.5
CCDC93-209ENST00000488908 COX6A2Q02221 97 aa-0.54□□□□□ -2.5
CCDC93-209ENST00000488908 AESQ08117 197 aa-0.54□□□□□ -2.5
CCDC93-209ENST00000488908 ZNF56Q15929 161 aa-0.54□□□□□ -2.5
CCDC93-209ENST00000488908 TMEM97Q5BJF2 176 aa-0.54□□□□□ -2.5
CCDC93-209ENST00000488908 PPTC7Q8NI37 304 aa-0.54□□□□□ -2.5
CCDC93-209ENST00000488908 MALSU1Q96EH3 234 aa-0.54□□□□□ -2.5
CCDC93-209ENST00000488908 MAP1LC3BQ9GZQ8 125 aa-0.54□□□□□ -2.5
CCDC93-209ENST00000488908 ENY2Q9NPA8 101 aa-0.54□□□□□ -2.5
CCDC93-209ENST00000488908 NAT8BQ9UHF3 227 aa-0.54□□□□□ -2.5
CCDC93-209ENST00000488908 FLGP20930 4061 aaPredicted RBP-0.54□□□□□ -2.5
CCDC93-209ENST00000488908 ATG2AQ2TAZ0 1938 aa-0.54□□□□□ -2.5
CCDC93-209ENST00000488908 UBR2Q8IWV8 1755 aa-0.55□□□□□ -2.5
CCDC93-209ENST00000488908 DUXBA0A1W2PPF3 345 aa-0.55□□□□□ -2.5
CCDC93-209ENST00000488908 PIAS1O75925 651 aa-0.55□□□□□ -2.5
CCDC93-209ENST00000488908 GYPBP06028 91 aa-0.55□□□□□ -2.5
CCDC93-209ENST00000488908 ETV6P41212 452 aa-0.55□□□□□ -2.5
CCDC93-209ENST00000488908 ATP5G3P48201 142 aa-0.55□□□□□ -2.5
CCDC93-209ENST00000488908 IDO2Q6ZQW0 420 aa-0.55□□□□□ -2.5
CCDC93-209ENST00000488908 GOLT1AQ6ZVE7 132 aa-0.55□□□□□ -2.5
CCDC93-209ENST00000488908 IFT20Q8IY31 132 aa-0.55□□□□□ -2.5
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms