RNA–Protein interactions for RNA: ENST00000429411.5

HPS4-205, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 3,492 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-205ENST00000429411 Q0VG73 95 aa6.46□□□□□ -1.38
HPS4-205ENST00000429411 KLRD1Q13241 179 aa6.46□□□□□ -1.38
HPS4-205ENST00000429411 C5orf17Q8NAS9 161 aa6.46□□□□□ -1.38
HPS4-205ENST00000429411 TMEM70Q9BUB7 260 aa6.46□□□□□ -1.38
HPS4-205ENST00000429411 FAM181BA6NEQ2 426 aa6.45□□□□□ -1.38
HPS4-205ENST00000429411 CEACAM4O75871 244 aa6.45□□□□□ -1.38
HPS4-205ENST00000429411 OR2J3O76001 311 aa6.45□□□□□ -1.38
HPS4-205ENST00000429411 OR10J3Q5JRS4 329 aa6.45□□□□□ -1.38
HPS4-205ENST00000429411 STPG4Q8N801 248 aa6.45□□□□□ -1.38
HPS4-205ENST00000429411 FAM167A-AS1Q96KT0 104 aa6.45□□□□□ -1.38
HPS4-205ENST00000429411 AAMDCQ9H7C9 122 aa6.45□□□□□ -1.38
HPS4-205ENST00000429411 IGKV3-7A0A075B6H7 116 aa6.45□□□□□ -1.38
HPS4-205ENST00000429411 LOXP28300 417 aaPredicted RBP6.45□□□□□ -1.38
HPS4-205ENST00000429411 LGALS7P47929 136 aa6.45□□□□□ -1.38
HPS4-205ENST00000429411 CKS1BP61024 79 aa6.45□□□□□ -1.38
HPS4-205ENST00000429411 RUSC1-AS1Q66K80 236 aa6.45□□□□□ -1.38
HPS4-205ENST00000429411 LINC00173Q6ZV60 143 aa6.45□□□□□ -1.38
HPS4-205ENST00000429411 OR5AN1Q8NGI8 311 aa6.45□□□□□ -1.38
HPS4-205ENST00000429411 FXYD5Q96DB9 178 aa6.45□□□□□ -1.38
HPS4-205ENST00000429411 C17orf77Q96MU5 243 aa6.45□□□□□ -1.38
HPS4-205ENST00000429411 CSMD1Q96PZ7 3565 aa6.45□□□□□ -1.38
HPS4-205ENST00000429411 IGHV2-26A0A0B4J1V2 119 aa6.45□□□□□ -1.38
HPS4-205ENST00000429411 E7EQL1 145 aa6.45□□□□□ -1.38
HPS4-205ENST00000429411 TIMM23O14925 209 aa6.45□□□□□ -1.38
HPS4-205ENST00000429411 NUDT3O95989 172 aa6.45□□□□□ -1.38
HPS4-205ENST00000429411 ORM1P02763 201 aa6.45□□□□□ -1.38
HPS4-205ENST00000429411 ECSCRQ19T08 205 aa6.45□□□□□ -1.38
HPS4-205ENST00000429411 TEX43Q6ZNM6 134 aa6.45□□□□□ -1.38
HPS4-205ENST00000429411 ZNF833PQ6ZTB9 187 aa6.45□□□□□ -1.38
HPS4-205ENST00000429411 ORAOV1Q8WV07 137 aa6.45□□□□□ -1.38
HPS4-205ENST00000429411 MAP1LC3CQ9BXW4 147 aa6.45□□□□□ -1.38
HPS4-205ENST00000429411 TMEM191AQ9H0A3 160 aa6.45□□□□□ -1.38
HPS4-205ENST00000429411 SPENQ96T58 3664 aaKnown RBP6.44□□□□□ -1.38
HPS4-205ENST00000429411 IGLV2-8P01709 118 aa6.44□□□□□ -1.38
HPS4-205ENST00000429411 TCRAP04437 139 aa6.44□□□□□ -1.38
HPS4-205ENST00000429411 BPIFA4PQ86YQ2 179 aa6.44□□□□□ -1.38
HPS4-205ENST00000429411 C20orf144Q9BQM9 153 aa6.44□□□□□ -1.38
HPS4-205ENST00000429411 LY96Q9Y6Y9 160 aa6.44□□□□□ -1.38
HPS4-205ENST00000429411 APOHP02749 345 aaPredicted RBP6.44□□□□□ -1.38
HPS4-205ENST00000429411 PPIFP30405 207 aaKnown RBP6.44□□□□□ -1.38
HPS4-205ENST00000429411 TIMD4Q96H15 378 aa6.44□□□□□ -1.38
HPS4-205ENST00000429411 UFC1Q9Y3C8 167 aa6.44□□□□□ -1.38
HPS4-205ENST00000429411 IGHV1-3A0A0C4DH29 117 aa6.44□□□□□ -1.38
HPS4-205ENST00000429411 SMIM27A0A1W2PRY6 76 aa6.44□□□□□ -1.38
HPS4-205ENST00000429411 ZNF207O43670 478 aaKnown RBP6.44□□□□□ -1.38
HPS4-205ENST00000429411 IGLC2P0DOY2 106 aa6.44□□□□□ -1.38
HPS4-205ENST00000429411 IGLC3P0DOY3 106 aa6.44□□□□□ -1.38
HPS4-205ENST00000429411 POU2AF1Q16633 256 aa6.44□□□□□ -1.38
HPS4-205ENST00000429411 EBLN2Q6P2I7 272 aa6.44□□□□□ -1.38
HPS4-205ENST00000429411 C18orf15Q96N68 181 aa6.44□□□□□ -1.38
HPS4-205ENST00000429411 SIGLEC9Q9Y336 463 aa6.44□□□□□ -1.38
HPS4-205ENST00000429411 A0A0U1RRA0 63 aa6.43□□□□□ -1.38
HPS4-205ENST00000429411 GRNP28799 593 aaKnown RBP6.43□□□□□ -1.38
HPS4-205ENST00000429411 RPL11P62913 178 aaKnown RBP6.43□□□□□ -1.38
HPS4-205ENST00000429411 GDF5OSQ5U4N7 250 aa6.43□□□□□ -1.38
HPS4-205ENST00000429411 IGFL2Q6UWQ7 119 aa6.43□□□□□ -1.38
HPS4-205ENST00000429411 LINC00322Q6ZN03 302 aaPredicted RBP6.43□□□□□ -1.38
HPS4-205ENST00000429411 RBPMS2Q6ZRY4 209 aaKnown RBP6.43□□□□□ -1.38
HPS4-205ENST00000429411 TEX45Q8NA69 505 aa6.43□□□□□ -1.38
HPS4-205ENST00000429411 NAA38Q9BRA0 125 aaKnown RBP6.43□□□□□ -1.38
HPS4-205ENST00000429411 SLC25A39Q9BZJ4 359 aaPredicted RBP6.43□□□□□ -1.38
HPS4-205ENST00000429411 IGLL1P15814 213 aa6.43□□□□□ -1.38
HPS4-205ENST00000429411 KHDC1LQ5JSQ8 128 aa6.43□□□□□ -1.38
HPS4-205ENST00000429411 Q8TAT8 98 aa6.43□□□□□ -1.38
HPS4-205ENST00000429411 IGF2BP2-AS1Q96M15 143 aa6.43□□□□□ -1.38
HPS4-205ENST00000429411 IGHV3OR16-10A0A075B7F0 116 aa6.42□□□□□ -1.38
HPS4-205ENST00000429411 TRAV9-2A0A087WT02 112 aa6.42□□□□□ -1.38
HPS4-205ENST00000429411 ANKRD17O75179 2603 aaKnown RBP6.42□□□□□ -1.38
HPS4-205ENST00000429411 ARMS2P0C7Q2 107 aa6.42□□□□□ -1.38
HPS4-205ENST00000429411 TSPOP30536 169 aa6.42□□□□□ -1.38
HPS4-205ENST00000429411 CR1LQ2VPA4 569 aa6.42□□□□□ -1.38
HPS4-205ENST00000429411 MPV17L2Q567V2 206 aa6.42□□□□□ -1.38
HPS4-205ENST00000429411 Q71RC1 249 aaPredicted RBP6.42□□□□□ -1.38
HPS4-205ENST00000429411 ZNF738Q8NE65 137 aa6.42□□□□□ -1.38
HPS4-205ENST00000429411 AP5S1Q9NUS5 200 aa6.42□□□□□ -1.38
HPS4-205ENST00000429411 HIVEP2P31629 2446 aa6.42□□□□□ -1.38
HPS4-205ENST00000429411 OR2T8A6NH00 312 aa6.42□□□□□ -1.38
HPS4-205ENST00000429411 K7ERU9 68 aa6.42□□□□□ -1.38
HPS4-205ENST00000429411 RIGQ13278 110 aa6.42□□□□□ -1.38
HPS4-205ENST00000429411 TWIST1Q15672 202 aa6.42□□□□□ -1.38
HPS4-205ENST00000429411 LDLRAD2Q5SZI1 272 aa6.42□□□□□ -1.38
HPS4-205ENST00000429411 RAB37Q96AX2 223 aa6.42□□□□□ -1.38
HPS4-205ENST00000429411 ATRQ13535 2644 aa6.42□□□□□ -1.38
HPS4-205ENST00000429411 IGKV2-40A0A087WW87 121 aaPredicted RBP6.42□□□□□ -1.38
HPS4-205ENST00000429411 A0A1B0GUT8 65 aa6.42□□□□□ -1.38
HPS4-205ENST00000429411 IGLC7A0M8Q6 106 aa6.42□□□□□ -1.38
HPS4-205ENST00000429411 IGKV2D-40P01614 121 aaPredicted RBP6.42□□□□□ -1.38
HPS4-205ENST00000429411 HLA-DRB1P01911 266 aa6.42□□□□□ -1.38
HPS4-205ENST00000429411 THBDP07204 575 aa6.42□□□□□ -1.38
HPS4-205ENST00000429411 NMUP48645 174 aa6.42□□□□□ -1.38
HPS4-205ENST00000429411 RPS20P60866 119 aaKnown RBP6.42□□□□□ -1.38
HPS4-205ENST00000429411 TEX36Q5VZQ5 186 aa6.42□□□□□ -1.38
HPS4-205ENST00000429411 C8orf46Q8TAG6 207 aa6.42□□□□□ -1.38
HPS4-205ENST00000429411 SORL1Q92673 2214 aa6.41□□□□□ -1.38
HPS4-205ENST00000429411 IGKV1D-37A0A075B6S9 117 aa6.41□□□□□ -1.38
HPS4-205ENST00000429411 A0A087X0K7 114 aa6.41□□□□□ -1.38
HPS4-205ENST00000429411 TMEM189A5PLL7 270 aa6.41□□□□□ -1.38
HPS4-205ENST00000429411 SMKR1H3BMG3 65 aa6.41□□□□□ -1.38
HPS4-205ENST00000429411 CCL25O15444 150 aa6.41□□□□□ -1.38
HPS4-205ENST00000429411 NCR2O95944 276 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms