RNA–Protein interactions for RNA: ENST00000413574.6

CSNK1E-206, Transcript of casein kinase 1 epsilon, humanhuman

TSL 5 BASIC

Gene CSNK1E, Length 1,631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-206ENST00000413574 RPUSD4Q96CM3 377 aaKnown RBP22.52■■□□□ 1.2
CSNK1E-206ENST00000413574 B9D2Q9BPU9 175 aa22.52■■□□□ 1.2
CSNK1E-206ENST00000413574 MAP1LC3BQ9GZQ8 125 aa22.52■■□□□ 1.2
CSNK1E-206ENST00000413574 NBEAL2Q6ZNJ1 2754 aa22.52■■□□□ 1.2
CSNK1E-206ENST00000413574 IGKV3-20P01619 116 aa22.51■■□□□ 1.19
CSNK1E-206ENST00000413574 HLA-DRB4P13762 266 aa22.51■■□□□ 1.19
CSNK1E-206ENST00000413574 ICAM4Q14773 271 aa22.51■■□□□ 1.19
CSNK1E-206ENST00000413574 FAM74A1Q5RGS3 127 aa22.51■■□□□ 1.19
CSNK1E-206ENST00000413574 HLA-DRB4X5D2U9 266 aa22.51■■□□□ 1.19
CSNK1E-206ENST00000413574 A0A0J9YX75 114 aa22.5■■□□□ 1.19
CSNK1E-206ENST00000413574 EBLN2Q6P2I7 272 aa22.5■■□□□ 1.19
CSNK1E-206ENST00000413574 Q9H3A6 140 aa22.49■■□□□ 1.19
CSNK1E-206ENST00000413574 AAMDCQ9H7C9 122 aa22.49■■□□□ 1.19
CSNK1E-206ENST00000413574 ALKAL2Q6UX46 152 aa22.49■■□□□ 1.19
CSNK1E-206ENST00000413574 SUN5Q8TC36 379 aa22.49■■□□□ 1.19
CSNK1E-206ENST00000413574 SULT1A2P50226 295 aa22.48■■□□□ 1.19
CSNK1E-206ENST00000413574 DPPA3Q6W0C5 159 aa22.48■■□□□ 1.19
CSNK1E-206ENST00000413574 OR4B1Q8NGF8 309 aa22.48■■□□□ 1.19
CSNK1E-206ENST00000413574 CLEC5AQ9NY25 188 aa22.48■■□□□ 1.19
CSNK1E-206ENST00000413574 HUWE1Q7Z6Z7 4374 aaKnown RBP22.47■■□□□ 1.19
CSNK1E-206ENST00000413574 A0A1B0GV50 99 aa22.47■■□□□ 1.19
CSNK1E-206ENST00000413574 SFT2D1Q8WV19 159 aa22.47■■□□□ 1.19
CSNK1E-206ENST00000413574 OR8A1Q8NGG7 326 aa22.46■■□□□ 1.19
CSNK1E-206ENST00000413574 MBD3L1Q8WWY6 194 aa22.46■■□□□ 1.19
CSNK1E-206ENST00000413574 TMEM167BQ9NRX6 74 aa22.46■■□□□ 1.19
CSNK1E-206ENST00000413574 CNN1P51911 297 aaKnown RBP22.46■■□□□ 1.19
CSNK1E-206ENST00000413574 HIST1H1AQ02539 215 aaPredicted RBP22.46■■□□□ 1.19
CSNK1E-206ENST00000413574 RAB5CP51148 216 aa22.45■■□□□ 1.18
CSNK1E-206ENST00000413574 LYPD1Q8N2G4 141 aa22.45■■□□□ 1.18
CSNK1E-206ENST00000413574 H2AFB1P0C5Y9 115 aa22.44■■□□□ 1.18
CSNK1E-206ENST00000413574 APOC4P55056 127 aa22.44■■□□□ 1.18
CSNK1E-206ENST00000413574 MRPL53Q96EL3 112 aaKnown RBP22.44■■□□□ 1.18
CSNK1E-206ENST00000413574 CSTL1Q9H114 145 aa22.44■■□□□ 1.18
CSNK1E-206ENST00000413574 PRELID1Q9Y255 219 aa22.44■■□□□ 1.18
CSNK1E-206ENST00000413574 TGP01266 2768 aa22.43■■□□□ 1.18
CSNK1E-206ENST00000413574 PGPA6NDG6 321 aa22.43■■□□□ 1.18
CSNK1E-206ENST00000413574 OTORQ9NRC9 128 aa22.42■■□□□ 1.18
CSNK1E-206ENST00000413574 KIR2DL5BA0A0G2JN68 375 aa22.42■■□□□ 1.18
CSNK1E-206ENST00000413574 KIR2DL5BA0A0G2JPC4 375 aa22.42■■□□□ 1.18
CSNK1E-206ENST00000413574 FXYD7P58549 80 aa22.42■■□□□ 1.18
CSNK1E-206ENST00000413574 UBE2G2P60604 165 aa22.42■■□□□ 1.18
CSNK1E-206ENST00000413574 KIR2DL5AQ8N109 375 aa22.42■■□□□ 1.18
CSNK1E-206ENST00000413574 KIR2DL5BQ8NHK3 375 aa22.42■■□□□ 1.18
CSNK1E-206ENST00000413574 CA1P00915 261 aaPredicted RBP22.41■■□□□ 1.18
CSNK1E-206ENST00000413574 GIG44P09565 113 aaPredicted RBP22.41■■□□□ 1.18
CSNK1E-206ENST00000413574 SLC35B3Q9H1N7 401 aa22.41■■□□□ 1.18
CSNK1E-206ENST00000413574 RETNQ9HD89 108 aa22.41■■□□□ 1.18
CSNK1E-206ENST00000413574 DUSP14O95147 198 aaKnown RBP22.4■■□□□ 1.18
CSNK1E-206ENST00000413574 YTHDF2Q9Y5A9 579 aaKnown RBP22.4■■□□□ 1.18
CSNK1E-206ENST00000413574 IGKV2-40A0A087WW87 121 aaPredicted RBP22.39■■□□□ 1.18
CSNK1E-206ENST00000413574 IGKV2D-40P01614 121 aaPredicted RBP22.39■■□□□ 1.18
CSNK1E-206ENST00000413574 OR10J6PQ8NGY7 276 aa22.39■■□□□ 1.18
CSNK1E-206ENST00000413574 TM2D3Q9BRN9 247 aa22.39■■□□□ 1.18
CSNK1E-206ENST00000413574 TENM3Q9P273 2699 aa22.39■■□□□ 1.17
CSNK1E-206ENST00000413574 A8MTW9 85 aa22.39■■□□□ 1.17
CSNK1E-206ENST00000413574 ERCC8Q13216 396 aa22.39■■□□□ 1.17
CSNK1E-206ENST00000413574 AMTNQ6UX39 209 aa22.39■■□□□ 1.17
CSNK1E-206ENST00000413574 RPH3ALQ9UNE2 315 aa22.39■■□□□ 1.17
CSNK1E-206ENST00000413574 ZNF705EA8MWA4 302 aaPredicted RBP22.38■■□□□ 1.17
CSNK1E-206ENST00000413574 GGTLC3B5MD39 225 aa22.38■■□□□ 1.17
CSNK1E-206ENST00000413574 CCL20P78556 96 aa22.38■■□□□ 1.17
CSNK1E-206ENST00000413574 DEFB135Q30KP9 77 aa22.38■■□□□ 1.17
CSNK1E-206ENST00000413574 MORN3Q6PF18 240 aaPredicted RBP22.38■■□□□ 1.17
CSNK1E-206ENST00000413574 CLUHP3Q96NS8 147 aa22.38■■□□□ 1.17
CSNK1E-206ENST00000413574 SUMO1P63165 101 aaKnown RBP22.37■■□□□ 1.17
CSNK1E-206ENST00000413574 GNG5P63218 68 aa22.37■■□□□ 1.17
CSNK1E-206ENST00000413574 CSN1S1P47710 185 aa22.36■■□□□ 1.17
CSNK1E-206ENST00000413574 XCL2Q9UBD3 114 aa22.36■■□□□ 1.17
CSNK1E-206ENST00000413574 A0A1W2PRE2 83 aa22.35■■□□□ 1.17
CSNK1E-206ENST00000413574 FAM74A7A6NL05 159 aa22.35■■□□□ 1.17
CSNK1E-206ENST00000413574 UBE2CO00762 179 aa22.35■■□□□ 1.17
CSNK1E-206ENST00000413574 SLC25A5P05141 298 aaKnown RBP22.35■■□□□ 1.17
CSNK1E-206ENST00000413574 NUTF2P61970 127 aaKnown RBP22.35■■□□□ 1.17
CSNK1E-206ENST00000413574 CMTM2Q8TAZ6 248 aa22.35■■□□□ 1.17
CSNK1E-206ENST00000413574 VGLL1Q99990 258 aa22.35■■□□□ 1.17
CSNK1E-206ENST00000413574 DIRC3C9JPN6 131 aa22.35■■□□□ 1.17
CSNK1E-206ENST00000413574 NPIPB6E9PJ23 425 aa22.35■■□□□ 1.17
CSNK1E-206ENST00000413574 RXFP4Q8TDU9 374 aa22.35■■□□□ 1.17
CSNK1E-206ENST00000413574 M0R2Z0 102 aa22.34■■□□□ 1.17
CSNK1E-206ENST00000413574 AGPAT4-IT1Q9H0P7 198 aa22.34■■□□□ 1.17
CSNK1E-206ENST00000413574 CT45A10P0DMU9 189 aa22.33■■□□□ 1.17
CSNK1E-206ENST00000413574 SPINK13Q1W4C9 94 aa22.33■■□□□ 1.17
CSNK1E-206ENST00000413574 SPATA25Q9BR10 227 aa22.33■■□□□ 1.17
CSNK1E-206ENST00000413574 TRAV1-1A0A0B4J248 108 aa22.32■■□□□ 1.16
CSNK1E-206ENST00000413574 Q6ZWC4 215 aa22.32■■□□□ 1.16
CSNK1E-206ENST00000413574 PPP1R14DQ9NXH3 145 aa22.32■■□□□ 1.16
CSNK1E-206ENST00000413574 PAGE4O60829 102 aa22.31■■□□□ 1.16
CSNK1E-206ENST00000413574 NHLRC4P0CG21 123 aaPredicted RBP22.31■■□□□ 1.16
CSNK1E-206ENST00000413574 TEX261Q6UWH6 196 aa22.31■■□□□ 1.16
CSNK1E-206ENST00000413574 ZMAT4Q9H898 229 aa22.31■■□□□ 1.16
CSNK1E-206ENST00000413574 C9orf47Q6ZRZ4 202 aa22.31■■□□□ 1.16
CSNK1E-206ENST00000413574 GOLT1AQ6ZVE7 132 aa22.31■■□□□ 1.16
CSNK1E-206ENST00000413574 C5orf17Q8NAS9 161 aa22.31■■□□□ 1.16
CSNK1E-206ENST00000413574 OVOL2Q9BRP0 275 aa22.31■■□□□ 1.16
CSNK1E-206ENST00000413574 CST9LP1Q5W188 147 aa22.3■■□□□ 1.16
CSNK1E-206ENST00000413574 CSNK1G2-AS1Q8NCQ2 148 aa22.3■■□□□ 1.16
CSNK1E-206ENST00000413574 RCHY1Q96PM5 261 aa22.3■■□□□ 1.16
CSNK1E-206ENST00000413574 HBE1P02100 147 aa22.29■■□□□ 1.16
CSNK1E-206ENST00000413574 RNF183Q96D59 192 aa22.29■■□□□ 1.16
CSNK1E-206ENST00000413574 EPDR1Q9UM22 224 aa22.29■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms