RNA–Protein interactions for RNA: ENST00000384161.1

RNU6-48P-201, Transcript of RNA, U6 small nuclear 48, pseudogene, humanhuman

BASIC

Gene RNU6-48P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-48P-201ENST00000384161 OR2T8A6NH00 312 aa0.31□□□□□ -2.36
RNU6-48P-201ENST00000384161 NDUFB3O43676 98 aa0.31□□□□□ -2.36
RNU6-48P-201ENST00000384161 GGCTO75223 188 aaKnown RBP0.31□□□□□ -2.36
RNU6-48P-201ENST00000384161 OR7C1O76099 320 aaPredicted RBP0.31□□□□□ -2.36
RNU6-48P-201ENST00000384161 SRIP30626 198 aa0.31□□□□□ -2.36
RNU6-48P-201ENST00000384161 DSCR4P56555 118 aaPredicted RBP0.31□□□□□ -2.36
RNU6-48P-201ENST00000384161 PIGPP57054 158 aa0.31□□□□□ -2.36
RNU6-48P-201ENST00000384161 CCL7P80098 99 aa0.31□□□□□ -2.36
RNU6-48P-201ENST00000384161 RRN3P1Q2M238 152 aa0.31□□□□□ -2.36
RNU6-48P-201ENST00000384161 Q8IYB0 196 aa0.31□□□□□ -2.36
RNU6-48P-201ENST00000384161 PPP1R14BQ96C90 147 aa0.31□□□□□ -2.36
RNU6-48P-201ENST00000384161 SLC25A21Q9BQT8 299 aaPredicted RBP0.31□□□□□ -2.36
RNU6-48P-201ENST00000384161 IMUPQ9GZP8 106 aa0.31□□□□□ -2.36
RNU6-48P-201ENST00000384161 TMEM126AQ9H061 195 aa0.31□□□□□ -2.36
RNU6-48P-201ENST00000384161 RNASE7Q9H1E1 156 aaKnown RBP0.31□□□□□ -2.36
RNU6-48P-201ENST00000384161 TLNRD1Q9H1K6 362 aa0.31□□□□□ -2.36
RNU6-48P-201ENST00000384161 NMNAT1Q9HAN9 279 aaPredicted RBP0.31□□□□□ -2.36
RNU6-48P-201ENST00000384161 TAS2R7Q9NYW3 318 aa0.31□□□□□ -2.36
RNU6-48P-201ENST00000384161 LY96Q9Y6Y9 160 aa0.31□□□□□ -2.36
RNU6-48P-201ENST00000384161 APC2O95996 2303 aa0.31□□□□□ -2.36
RNU6-48P-201ENST00000384161 CCDC144AA2RUR9 1427 aa0.3□□□□□ -2.36
RNU6-48P-201ENST00000384161 ABCA4P78363 2273 aa0.3□□□□□ -2.36
RNU6-48P-201ENST00000384161 FANCMQ8IYD8 2048 aa0.3□□□□□ -2.36
RNU6-48P-201ENST00000384161 TRAV10A0A0B4J240 114 aa0.3□□□□□ -2.36
RNU6-48P-201ENST00000384161 E7EUB6 86 aa0.3□□□□□ -2.36
RNU6-48P-201ENST00000384161 CDKN2CP42773 168 aa0.3□□□□□ -2.36
RNU6-48P-201ENST00000384161 MYL6P60660 151 aa0.3□□□□□ -2.36
RNU6-48P-201ENST00000384161 LIN52Q52LA3 116 aa0.3□□□□□ -2.36
RNU6-48P-201ENST00000384161 TEN1Q86WV5 123 aa0.3□□□□□ -2.36
RNU6-48P-201ENST00000384161 PDZD9Q8IXQ8 264 aa0.3□□□□□ -2.36
RNU6-48P-201ENST00000384161 OR11H6Q8NGC7 330 aa0.3□□□□□ -2.36
RNU6-48P-201ENST00000384161 OR5D14Q8NGL3 314 aa0.3□□□□□ -2.36
RNU6-48P-201ENST00000384161 OR10K1Q8NGX5 313 aa0.3□□□□□ -2.36
RNU6-48P-201ENST00000384161 LYSMD1Q96S90 227 aa0.3□□□□□ -2.36
RNU6-48P-201ENST00000384161 NIT2Q9NQR4 276 aa0.3□□□□□ -2.36
RNU6-48P-201ENST00000384161 PCTPQ9UKL6 214 aa0.3□□□□□ -2.36
RNU6-48P-201ENST00000384161 PTPRQQ9UMZ3 2332 aa0.3□□□□□ -2.36
RNU6-48P-201ENST00000384161 LRP1Q07954 4544 aaKnown RBP0.3□□□□□ -2.36
RNU6-48P-201ENST00000384161 CDK12Q9NYV4 1490 aaPredicted RBP0.29□□□□□ -2.36
RNU6-48P-201ENST00000384161 MRC2Q9UBG0 1479 aa0.29□□□□□ -2.36
RNU6-48P-201ENST00000384161 DYNC1H1Q14204 4646 aaKnown RBP0.29□□□□□ -2.36
RNU6-48P-201ENST00000384161 TMEM114B3SHH9 223 aa0.29□□□□□ -2.36
RNU6-48P-201ENST00000384161 C17orf112F2Z3M2 114 aa0.29□□□□□ -2.36
RNU6-48P-201ENST00000384161 H3BRM9 83 aa0.29□□□□□ -2.36
RNU6-48P-201ENST00000384161 ERC2-IT1O76042 136 aa0.29□□□□□ -2.36
RNU6-48P-201ENST00000384161 IFNA7P01567 189 aa0.29□□□□□ -2.36
RNU6-48P-201ENST00000384161 ROMO1P60602 79 aa0.29□□□□□ -2.36
RNU6-48P-201ENST00000384161 UBE2BP63146 152 aa0.29□□□□□ -2.36
RNU6-48P-201ENST00000384161 ITGB3BPQ13352 177 aaPredicted RBP0.29□□□□□ -2.36
RNU6-48P-201ENST00000384161 KRTAP19-6Q3LI70 58 aa0.29□□□□□ -2.36
RNU6-48P-201ENST00000384161 AKIRIN2Q53H80 203 aa0.29□□□□□ -2.36
RNU6-48P-201ENST00000384161 OR10AC1Q8NH08 325 aa0.29□□□□□ -2.36
RNU6-48P-201ENST00000384161 PSMF1Q92530 271 aa0.29□□□□□ -2.36
RNU6-48P-201ENST00000384161 TEX37Q96LM6 180 aa0.29□□□□□ -2.36
RNU6-48P-201ENST00000384161 SIGMAR1Q99720 223 aa0.29□□□□□ -2.36
RNU6-48P-201ENST00000384161 ZGRF1Q86YA3 2104 aa0.29□□□□□ -2.36
RNU6-48P-201ENST00000384161 PRKDCP78527 4128 aaKnown RBP0.29□□□□□ -2.36
RNU6-48P-201ENST00000384161 ARAP1Q96P48 1450 aa0.29□□□□□ -2.36
RNU6-48P-201ENST00000384161 DOCK4Q8N1I0 1966 aa0.28□□□□□ -2.36
RNU6-48P-201ENST00000384161 CSMD3Q7Z407 3707 aa0.28□□□□□ -2.36
RNU6-48P-201ENST00000384161 PKD1P98161 4303 aa0.28□□□□□ -2.36
RNU6-48P-201ENST00000384161 A0A087WSZ3 146 aa0.28□□□□□ -2.36
RNU6-48P-201ENST00000384161 F8W1H4 67 aa0.28□□□□□ -2.36
RNU6-48P-201ENST00000384161 KLF7O75840 302 aaPredicted RBP0.28□□□□□ -2.36
RNU6-48P-201ENST00000384161 COX7CP15954 63 aa0.28□□□□□ -2.36
RNU6-48P-201ENST00000384161 SPINK9Q5DT21 86 aa0.28□□□□□ -2.36
RNU6-48P-201ENST00000384161 KRTAP26-1Q6PEX3 210 aa0.28□□□□□ -2.36
RNU6-48P-201ENST00000384161 MUCL1Q96DR8 90 aa0.28□□□□□ -2.36
RNU6-48P-201ENST00000384161 PBOV1Q9GZY1 135 aa0.28□□□□□ -2.36
RNU6-48P-201ENST00000384161 PSTPIP2Q9H939 334 aa0.28□□□□□ -2.36
RNU6-48P-201ENST00000384161 MED29Q9NX70 200 aa0.28□□□□□ -2.36
RNU6-48P-201ENST00000384161 HSPB8Q9UJY1 196 aa0.28□□□□□ -2.36
RNU6-48P-201ENST00000384161 NUP210LQ5VU65 1888 aa0.28□□□□□ -2.36
RNU6-48P-201ENST00000384161 FREM3P0C091 2139 aa0.28□□□□□ -2.37
RNU6-48P-201ENST00000384161 OR10J4P0C629 311 aa0.27□□□□□ -2.37
RNU6-48P-201ENST00000384161 CXCL8P10145 99 aa0.27□□□□□ -2.37
RNU6-48P-201ENST00000384161 HOXA6P31267 233 aa0.27□□□□□ -2.37
RNU6-48P-201ENST00000384161 ASIPP42127 132 aa0.27□□□□□ -2.37
RNU6-48P-201ENST00000384161 DEFA3P59666 94 aa0.27□□□□□ -2.37
RNU6-48P-201ENST00000384161 STAG3L4Q8TBR4 150 aa0.27□□□□□ -2.37
RNU6-48P-201ENST00000384161 PRAP1Q96NZ9 151 aa0.27□□□□□ -2.37
RNU6-48P-201ENST00000384161 TMEM138Q9NPI0 162 aa0.27□□□□□ -2.37
RNU6-48P-201ENST00000384161 OR52A1Q9UKL2 312 aa0.27□□□□□ -2.37
RNU6-48P-201ENST00000384161 ANK2Q01484 3957 aa0.27□□□□□ -2.37
RNU6-48P-201ENST00000384161 NCAPD3P42695 1498 aa0.27□□□□□ -2.37
RNU6-48P-201ENST00000384161 MYO5AQ9Y4I1 1855 aaKnown RBP0.27□□□□□ -2.37
RNU6-48P-201ENST00000384161 MUC4Q99102 2169 aa0.26□□□□□ -2.37
RNU6-48P-201ENST00000384161 DMDP11532 3685 aa0.26□□□□□ -2.37
RNU6-48P-201ENST00000384161 CACNA1EQ15878 2313 aa0.26□□□□□ -2.37
RNU6-48P-201ENST00000384161 SPTBN1Q01082 2364 aaKnown RBP0.26□□□□□ -2.37
RNU6-48P-201ENST00000384161 TAX1BP3O14907 124 aa0.26□□□□□ -2.37
RNU6-48P-201ENST00000384161 PRH1P02810 166 aa0.26□□□□□ -2.37
RNU6-48P-201ENST00000384161 CD2P06729 351 aa0.26□□□□□ -2.37
RNU6-48P-201ENST00000384161 HLA-EP13747 358 aa0.26□□□□□ -2.37
RNU6-48P-201ENST00000384161 MT4P47944 62 aa0.26□□□□□ -2.37
RNU6-48P-201ENST00000384161 ATP5G3P48201 142 aa0.26□□□□□ -2.37
RNU6-48P-201ENST00000384161 CDK6Q00534 326 aa0.26□□□□□ -2.37
RNU6-48P-201ENST00000384161 EIF5AL1Q6IS14 154 aaKnown RBP0.26□□□□□ -2.37
RNU6-48P-201ENST00000384161 GOLT1AQ6ZVE7 132 aa0.26□□□□□ -2.37
RNU6-48P-201ENST00000384161 OR5AS1Q8N127 324 aa0.26□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 89.7 ms