RNA–Protein interactions for RNA: ENST00000378133.4

PCDHA1-201, Transcript of protocadherin alpha 1, humanhuman

BASIC

Gene PCDHA1, Length 2,726 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-201ENST00000378133 BUB1B-PAK6H3BSN5 160 aa13.12□□□□□ -0.31
PCDHA1-201ENST00000378133 SMAD7O15105 426 aaKnown RBP13.12□□□□□ -0.31
PCDHA1-201ENST00000378133 NEGR1Q7Z3B1 354 aa13.12□□□□□ -0.31
PCDHA1-201ENST00000378133 MSRB2Q9Y3D2 182 aa13.12□□□□□ -0.31
PCDHA1-201ENST00000378133 A0A096LNJ9 63 aa13.11□□□□□ -0.31
PCDHA1-201ENST00000378133 ZNF785A8K8V0 405 aa13.11□□□□□ -0.31
PCDHA1-201ENST00000378133 COX7A1P24310 79 aa13.11□□□□□ -0.31
PCDHA1-201ENST00000378133 RAB9AP51151 201 aa13.11□□□□□ -0.31
PCDHA1-201ENST00000378133 PLP1P60201 277 aa13.11□□□□□ -0.31
PCDHA1-201ENST00000378133 OR9G4Q8NGQ1 327 aa13.11□□□□□ -0.31
PCDHA1-201ENST00000378133 ASCL2Q99929 193 aa13.11□□□□□ -0.31
PCDHA1-201ENST00000378133 PRB4P10163 310 aaPredicted RBP13.11□□□□□ -0.31
PCDHA1-201ENST00000378133 LGALS9BQ3B8N2 356 aa13.11□□□□□ -0.31
PCDHA1-201ENST00000378133 LGALS9CQ6DKI2 356 aa13.11□□□□□ -0.31
PCDHA1-201ENST00000378133 RBP4P02753 201 aa13.1□□□□□ -0.31
PCDHA1-201ENST00000378133 CACNG7P62955 275 aa13.1□□□□□ -0.31
PCDHA1-201ENST00000378133 PRR30Q53SZ7 412 aaPredicted RBP13.1□□□□□ -0.31
PCDHA1-201ENST00000378133 ZNF48Q96MX3 618 aaPredicted RBP13.1□□□□□ -0.31
PCDHA1-201ENST00000378133 SLC25A39Q9BZJ4 359 aaPredicted RBP13.1□□□□□ -0.31
PCDHA1-201ENST00000378133 SPCS1Q9Y6A9 102 aa13.1□□□□□ -0.31
PCDHA1-201ENST00000378133 ABCA4P78363 2273 aa13.1□□□□□ -0.31
PCDHA1-201ENST00000378133 A0A1B0GW15 77 aa13.1□□□□□ -0.31
PCDHA1-201ENST00000378133 ADAMTSL5Q6ZMM2 481 aa13.1□□□□□ -0.31
PCDHA1-201ENST00000378133 GATD1Q8NB37 220 aa13.1□□□□□ -0.31
PCDHA1-201ENST00000378133 NGBQ9NPG2 151 aa13.1□□□□□ -0.31
PCDHA1-201ENST00000378133 SIGLEC8Q9NYZ4 499 aa13.1□□□□□ -0.31
PCDHA1-201ENST00000378133 LRBAP50851 2863 aa13.09□□□□□ -0.31
PCDHA1-201ENST00000378133 CEP295Q9C0D2 2601 aa13.09□□□□□ -0.31
PCDHA1-201ENST00000378133 A0A1W2PPM0 123 aa13.09□□□□□ -0.31
PCDHA1-201ENST00000378133 OR4X2Q8NGF9 303 aa13.09□□□□□ -0.31
PCDHA1-201ENST00000378133 CSMD1Q96PZ7 3565 aa13.09□□□□□ -0.31
PCDHA1-201ENST00000378133 D6R8Y8 96 aa13.09□□□□□ -0.31
PCDHA1-201ENST00000378133 SIVA1O15304 175 aa13.09□□□□□ -0.31
PCDHA1-201ENST00000378133 FXYD7P58549 80 aa13.09□□□□□ -0.31
PCDHA1-201ENST00000378133 PLGLAQ15195 96 aa13.09□□□□□ -0.31
PCDHA1-201ENST00000378133 OR5A1Q8NGJ0 315 aa13.09□□□□□ -0.31
PCDHA1-201ENST00000378133 RPEQ96AT9 228 aa13.08□□□□□ -0.32
PCDHA1-201ENST00000378133 RASL11BQ9BPW5 248 aa13.08□□□□□ -0.32
PCDHA1-201ENST00000378133 ARHGAP32A7KAX9 2087 aa13.08□□□□□ -0.32
PCDHA1-201ENST00000378133 I3L2K1 104 aa13.08□□□□□ -0.32
PCDHA1-201ENST00000378133 HOXB4P17483 251 aaPredicted RBP13.08□□□□□ -0.32
PCDHA1-201ENST00000378133 NMUP48645 174 aa13.08□□□□□ -0.32
PCDHA1-201ENST00000378133 NPFFR1Q9GZQ6 430 aa13.08□□□□□ -0.32
PCDHA1-201ENST00000378133 TMEM14CQ9P0S9 112 aa13.07□□□□□ -0.32
PCDHA1-201ENST00000378133 RELNP78509 3460 aa13.07□□□□□ -0.32
PCDHA1-201ENST00000378133 PCP2Q8IVA1 136 aa13.07□□□□□ -0.32
PCDHA1-201ENST00000378133 C17orf77Q96MU5 243 aa13.07□□□□□ -0.32
PCDHA1-201ENST00000378133 PRELID3AQ96N28 172 aa13.07□□□□□ -0.32
PCDHA1-201ENST00000378133 TRBV6-1A0A0K0K1D8 114 aa13.06□□□□□ -0.32
PCDHA1-201ENST00000378133 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.06□□□□□ -0.32
PCDHA1-201ENST00000378133 CNIH1O95406 144 aa13.06□□□□□ -0.32
PCDHA1-201ENST00000378133 IGKV1-17P01599 117 aa13.06□□□□□ -0.32
PCDHA1-201ENST00000378133 ZNF414Q96IQ9 312 aa13.06□□□□□ -0.32
PCDHA1-201ENST00000378133 DCHS2Q6V1P9 2916 aa13.06□□□□□ -0.32
PCDHA1-201ENST00000378133 B9A039 149 aa13.06□□□□□ -0.32
PCDHA1-201ENST00000378133 FABP2P12104 132 aa13.06□□□□□ -0.32
PCDHA1-201ENST00000378133 CRIP1P50238 77 aa13.06□□□□□ -0.32
PCDHA1-201ENST00000378133 Q6AWC8 147 aa13.06□□□□□ -0.32
PCDHA1-201ENST00000378133 ZNF493Q6ZR52 646 aa13.06□□□□□ -0.32
PCDHA1-201ENST00000378133 PSG8Q9UQ74 426 aa13.06□□□□□ -0.32
PCDHA1-201ENST00000378133 SCGB1A1P11684 91 aa13.05□□□□□ -0.32
PCDHA1-201ENST00000378133 TMEM75Q8N9X5 138 aa13.05□□□□□ -0.32
PCDHA1-201ENST00000378133 TLN1Q9Y490 2541 aaKnown RBP13.05□□□□□ -0.32
PCDHA1-201ENST00000378133 K7EQM0 130 aa13.05□□□□□ -0.32
PCDHA1-201ENST00000378133 HBDP02042 147 aa13.05□□□□□ -0.32
PCDHA1-201ENST00000378133 CD3EP07766 207 aa13.05□□□□□ -0.32
PCDHA1-201ENST00000378133 AMN1Q8IY45 258 aa13.05□□□□□ -0.32
PCDHA1-201ENST00000378133 IGFBPL1Q8WX77 278 aa13.05□□□□□ -0.32
PCDHA1-201ENST00000378133 TMEM213A2RRL7 107 aa13.04□□□□□ -0.32
PCDHA1-201ENST00000378133 RPL24P83731 157 aaKnown RBP13.04□□□□□ -0.32
PCDHA1-201ENST00000378133 ORMDL3Q8N138 153 aa13.04□□□□□ -0.32
PCDHA1-201ENST00000378133 LINC01560Q8TB33 94 aa13.04□□□□□ -0.32
PCDHA1-201ENST00000378133 IFI27L1Q96BM0 104 aa13.04□□□□□ -0.32
PCDHA1-201ENST00000378133 K7ENP7 123 aa13.04□□□□□ -0.32
PCDHA1-201ENST00000378133 SMIM17P0DL12 118 aa13.04□□□□□ -0.32
PCDHA1-201ENST00000378133 CKS1BP61024 79 aa13.04□□□□□ -0.32
PCDHA1-201ENST00000378133 TM4SF20Q53R12 229 aa13.04□□□□□ -0.32
PCDHA1-201ENST00000378133 SAMD5Q5TGI4 173 aa13.04□□□□□ -0.32
PCDHA1-201ENST00000378133 LYZL1Q6UWQ5 148 aa13.04□□□□□ -0.32
PCDHA1-201ENST00000378133 SIGMAR1Q99720 223 aa13.04□□□□□ -0.32
PCDHA1-201ENST00000378133 SMIM13P0DJ93 91 aa13.04□□□□□ -0.32
PCDHA1-201ENST00000378133 PSG3Q16557 428 aa13.04□□□□□ -0.32
PCDHA1-201ENST00000378133 FAM104BQ5XKR9 115 aa13.04□□□□□ -0.32
PCDHA1-201ENST00000378133 U3KQK5 164 aa13.04□□□□□ -0.32
PCDHA1-201ENST00000378133 SPTBN4Q9H254 2564 aa13.03□□□□□ -0.32
PCDHA1-201ENST00000378133 TRBV19A0A075B6N1 114 aa13.03□□□□□ -0.32
PCDHA1-201ENST00000378133 TMSB15BA0A087X1C1 80 aa13.03□□□□□ -0.32
PCDHA1-201ENST00000378133 K7EIM0 57 aa13.03□□□□□ -0.32
PCDHA1-201ENST00000378133 TIMM23O14925 209 aa13.03□□□□□ -0.32
PCDHA1-201ENST00000378133 ONECUT1Q9UBC0 465 aa13.03□□□□□ -0.32
PCDHA1-201ENST00000378133 S4R3C0 116 aa13.03□□□□□ -0.32
PCDHA1-201ENST00000378133 RAXQ9Y2V3 346 aa13.03□□□□□ -0.32
PCDHA1-201ENST00000378133 LY6LH3BQJ8 138 aa13.02□□□□□ -0.32
PCDHA1-201ENST00000378133 CT45A10P0DMU9 189 aa13.02□□□□□ -0.32
PCDHA1-201ENST00000378133 KLF17Q5JT82 389 aaPredicted RBP13.02□□□□□ -0.32
PCDHA1-201ENST00000378133 DKK2Q9UBU2 259 aa13.02□□□□□ -0.32
PCDHA1-201ENST00000378133 WFDC3Q8IUB2 231 aa13.02□□□□□ -0.33
PCDHA1-201ENST00000378133 C8orf49Q96NF6 230 aa13.02□□□□□ -0.33
PCDHA1-201ENST00000378133 GCSHP23434 173 aa13.01□□□□□ -0.33
PCDHA1-201ENST00000378133 MRPL51Q4U2R6 128 aaKnown RBP13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 111.9 ms