RNA–Protein interactions for RNA: ENST00000613744.4

POLR2J3-220, Transcript of RNA polymerase II subunit J3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene POLR2J3, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-220ENST00000613744 TMEM177Q53S58 311 aa17.49■□□□□ 0.39
POLR2J3-220ENST00000613744 LGALS9CQ6DKI2 356 aa17.49■□□□□ 0.39
POLR2J3-220ENST00000613744 THAP8Q8NA92 274 aa17.49■□□□□ 0.39
POLR2J3-220ENST00000613744 HECTD1Q9ULT8 2610 aa17.49■□□□□ 0.39
POLR2J3-220ENST00000613744 APOHP02749 345 aaPredicted RBP17.48■□□□□ 0.39
POLR2J3-220ENST00000613744 ERHP84090 104 aaKnown RBP17.48■□□□□ 0.39
POLR2J3-220ENST00000613744 TMEM30BQ3MIR4 351 aa17.48■□□□□ 0.39
POLR2J3-220ENST00000613744 PATE2Q6UY27 113 aa17.48■□□□□ 0.39
POLR2J3-220ENST00000613744 ARFGEF3Q5TH69 2177 aa17.48■□□□□ 0.39
POLR2J3-220ENST00000613744 DSCAMO60469 2012 aa17.48■□□□□ 0.39
POLR2J3-220ENST00000613744 IGKV1D-17A0A075B6S4 117 aa17.48■□□□□ 0.39
POLR2J3-220ENST00000613744 SRRM5B3KS81 715 aa17.48■□□□□ 0.39
POLR2J3-220ENST00000613744 SMAD7O15105 426 aaKnown RBP17.48■□□□□ 0.39
POLR2J3-220ENST00000613744 GNG5P63218 68 aa17.48■□□□□ 0.39
POLR2J3-220ENST00000613744 CCL8P80075 99 aa17.48■□□□□ 0.39
POLR2J3-220ENST00000613744 TNFAIP6P98066 277 aaPredicted RBP17.48■□□□□ 0.39
POLR2J3-220ENST00000613744 PSMG4Q5JS54 123 aa17.48■□□□□ 0.39
POLR2J3-220ENST00000613744 PRSS57Q6UWY2 283 aa17.48■□□□□ 0.39
POLR2J3-220ENST00000613744 ITLN1Q8WWA0 313 aa17.48■□□□□ 0.39
POLR2J3-220ENST00000613744 SPCS1Q9Y6A9 102 aa17.48■□□□□ 0.39
POLR2J3-220ENST00000613744 RAI1Q7Z5J4 1906 aaPredicted RBP17.47■□□□□ 0.39
POLR2J3-220ENST00000613744 CFHR2P36980 270 aa17.47■□□□□ 0.39
POLR2J3-220ENST00000613744 C16orf54Q6UWD8 224 aa17.47■□□□□ 0.39
POLR2J3-220ENST00000613744 LINC00322Q6ZN03 302 aaPredicted RBP17.47■□□□□ 0.39
POLR2J3-220ENST00000613744 OR5AN1Q8NGI8 311 aa17.47■□□□□ 0.39
POLR2J3-220ENST00000613744 PERPQ96FX8 193 aa17.47■□□□□ 0.39
POLR2J3-220ENST00000613744 SLC25A48Q6ZT89 311 aaKnown RBP17.46■□□□□ 0.39
POLR2J3-220ENST00000613744 PGPA6NDG6 321 aa17.46■□□□□ 0.39
POLR2J3-220ENST00000613744 C17orf100A8MU93 164 aa17.46■□□□□ 0.39
POLR2J3-220ENST00000613744 PPIAL4GP0DN37 164 aa17.46■□□□□ 0.39
POLR2J3-220ENST00000613744 FABP2P12104 132 aa17.46■□□□□ 0.39
POLR2J3-220ENST00000613744 MLANAQ16655 118 aa17.46■□□□□ 0.39
POLR2J3-220ENST00000613744 C11orf71Q6IPW1 123 aa17.46■□□□□ 0.39
POLR2J3-220ENST00000613744 ADAMTSL5Q6ZMM2 481 aa17.46■□□□□ 0.39
POLR2J3-220ENST00000613744 FA2HQ7L5A8 372 aa17.46■□□□□ 0.39
POLR2J3-220ENST00000613744 MOGAT3Q86VF5 341 aa17.46■□□□□ 0.39
POLR2J3-220ENST00000613744 H0Y8G0 127 aa17.45■□□□□ 0.38
POLR2J3-220ENST00000613744 ZNF137PP52743 207 aa17.45■□□□□ 0.38
POLR2J3-220ENST00000613744 RIGQ13278 110 aa17.45■□□□□ 0.38
POLR2J3-220ENST00000613744 C17orf58Q2M2W7 97 aa17.45■□□□□ 0.38
POLR2J3-220ENST00000613744 MCRIP2Q9BUT9 160 aaKnown RBP17.45■□□□□ 0.38
POLR2J3-220ENST00000613744 SPG11Q96JI7 2443 aa17.45■□□□□ 0.38
POLR2J3-220ENST00000613744 CD24P25063 80 aa17.44■□□□□ 0.38
POLR2J3-220ENST00000613744 DTX2Q86UW9 622 aa17.44■□□□□ 0.38
POLR2J3-220ENST00000613744 NDUFA4L2Q9NRX3 87 aa17.44■□□□□ 0.38
POLR2J3-220ENST00000613744 TRBV6-1A0A0K0K1D8 114 aa17.44■□□□□ 0.38
POLR2J3-220ENST00000613744 KBTBD11-OT1A0A1B0GTJ5 212 aa17.44■□□□□ 0.38
POLR2J3-220ENST00000613744 FOXE3Q13461 319 aa17.44■□□□□ 0.38
POLR2J3-220ENST00000613744 A0A1B0GV72 72 aa17.43■□□□□ 0.38
POLR2J3-220ENST00000613744 LY6HO94772 140 aa17.43■□□□□ 0.38
POLR2J3-220ENST00000613744 ZNF138P52744 262 aa17.43■□□□□ 0.38
POLR2J3-220ENST00000613744 ZC2HC1AQ96GY0 325 aa17.43■□□□□ 0.38
POLR2J3-220ENST00000613744 SIGMAR1Q99720 223 aa17.43■□□□□ 0.38
POLR2J3-220ENST00000613744 ABCA12Q86UK0 2595 aa17.43■□□□□ 0.38
POLR2J3-220ENST00000613744 NDUFS7O75251 213 aa17.43■□□□□ 0.38
POLR2J3-220ENST00000613744 LINC00305Q7Z4B0 112 aa17.43■□□□□ 0.38
POLR2J3-220ENST00000613744 CCL19Q99731 98 aa17.43■□□□□ 0.38
POLR2J3-220ENST00000613744 A0A1B0GUT8 65 aa17.42■□□□□ 0.38
POLR2J3-220ENST00000613744 C22orf46C9J442 243 aa17.42■□□□□ 0.38
POLR2J3-220ENST00000613744 IGHV3-7P01780 117 aa17.42■□□□□ 0.38
POLR2J3-220ENST00000613744 TCRAP04437 139 aa17.42■□□□□ 0.38
POLR2J3-220ENST00000613744 SUB1P53999 127 aaKnown RBP eCLIP17.42■□□□□ 0.38
POLR2J3-220ENST00000613744 OSR1Q8TAX0 266 aaPredicted RBP17.42■□□□□ 0.38
POLR2J3-220ENST00000613744 IGKV1D-37A0A075B6S9 117 aa17.41■□□□□ 0.38
POLR2J3-220ENST00000613744 NCR2O95944 276 aa17.41■□□□□ 0.38
POLR2J3-220ENST00000613744 CT45A10P0DMU9 189 aa17.41■□□□□ 0.38
POLR2J3-220ENST00000613744 PRSS3P2Q8NHM4 247 aa17.41■□□□□ 0.38
POLR2J3-220ENST00000613744 SNAI2O43623 268 aa17.41■□□□□ 0.38
POLR2J3-220ENST00000613744 SAA1P0DJI8 122 aaPredicted RBP17.41■□□□□ 0.38
POLR2J3-220ENST00000613744 PIFOQ8TCI5 191 aa17.41■□□□□ 0.38
POLR2J3-220ENST00000613744 POLQO75417 2590 aa17.4■□□□□ 0.38
POLR2J3-220ENST00000613744 APCP25054 2843 aa17.4■□□□□ 0.38
POLR2J3-220ENST00000613744 OR4A5Q8NH83 315 aa17.4■□□□□ 0.38
POLR2J3-220ENST00000613744 CSMD1Q96PZ7 3565 aa17.4■□□□□ 0.38
POLR2J3-220ENST00000613744 CT45A6P0DMU7 189 aa17.4■□□□□ 0.38
POLR2J3-220ENST00000613744 CT45A5P0DMU8 189 aa17.4■□□□□ 0.38
POLR2J3-220ENST00000613744 CT45A7P0DMV0 189 aa17.4■□□□□ 0.38
POLR2J3-220ENST00000613744 Q6AWC8 147 aa17.4■□□□□ 0.38
POLR2J3-220ENST00000613744 LINC00574Q9H8X3 128 aa17.4■□□□□ 0.38
POLR2J3-220ENST00000613744 LYNX1G3V0Z9 82 aa17.39■□□□□ 0.37
POLR2J3-220ENST00000613744 J3QR89 54 aa17.39■□□□□ 0.37
POLR2J3-220ENST00000613744 OVOL3O00110 214 aa17.39■□□□□ 0.37
POLR2J3-220ENST00000613744 CSN3P07498 182 aa17.39■□□□□ 0.37
POLR2J3-220ENST00000613744 LYNX1P0DP58 116 aa17.39■□□□□ 0.37
POLR2J3-220ENST00000613744 Q86TA4 180 aa17.39■□□□□ 0.37
POLR2J3-220ENST00000613744 NPIPB3Q92617 1050 aa17.39■□□□□ 0.37
POLR2J3-220ENST00000613744 VPS13CQ709C8 3753 aa17.39■□□□□ 0.37
POLR2J3-220ENST00000613744 SMIM13P0DJ93 91 aa17.38■□□□□ 0.37
POLR2J3-220ENST00000613744 TNFRSF1AP19438 455 aa17.38■□□□□ 0.37
POLR2J3-220ENST00000613744 FAM201AQ5SY85 155 aa17.38■□□□□ 0.37
POLR2J3-220ENST00000613744 OR10W1Q8NGF6 305 aa17.38■□□□□ 0.37
POLR2J3-220ENST00000613744 LEAP2Q969E1 77 aa17.38■□□□□ 0.37
POLR2J3-220ENST00000613744 SIGLEC8Q9NYZ4 499 aa17.38■□□□□ 0.37
POLR2J3-220ENST00000613744 HILPDAQ9Y5L2 63 aa17.38■□□□□ 0.37
POLR2J3-220ENST00000613744 GNG7O60262 68 aa17.38■□□□□ 0.37
POLR2J3-220ENST00000613744 AZU1P20160 251 aa17.38■□□□□ 0.37
POLR2J3-220ENST00000613744 GATA4P43694 442 aa17.38■□□□□ 0.37
POLR2J3-220ENST00000613744 SSBP2P81877 361 aaPredicted RBP17.38■□□□□ 0.37
POLR2J3-220ENST00000613744 SAMD5Q5TGI4 173 aa17.38■□□□□ 0.37
POLR2J3-220ENST00000613744 THYN1Q9P016 225 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 84.8 ms