RNA–Protein interactions for RNA: ENST00000589076.5

SMAD4-207, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-207ENST00000589076 ALPK3Q96L96 1907 aa0.92□□□□□ -2.26
SMAD4-207ENST00000589076 TRGV10A0A0A0MS01 117 aa0.92□□□□□ -2.26
SMAD4-207ENST00000589076 TRBV6-7A0A0A0MS04 114 aa0.92□□□□□ -2.26
SMAD4-207ENST00000589076 TRBV6-8A0A0A6YYG3 113 aa0.92□□□□□ -2.26
SMAD4-207ENST00000589076 CLDN25C9JDP6 229 aa0.92□□□□□ -2.26
SMAD4-207ENST00000589076 HMGB3O15347 200 aaKnown RBP0.92□□□□□ -2.26
SMAD4-207ENST00000589076 IFNA7P01567 189 aa0.92□□□□□ -2.26
SMAD4-207ENST00000589076 HOXA6P31267 233 aa0.92□□□□□ -2.26
SMAD4-207ENST00000589076 ZNF93P35789 620 aaPredicted RBP0.92□□□□□ -2.26
SMAD4-207ENST00000589076 CAPZBP47756 277 aa0.92□□□□□ -2.26
SMAD4-207ENST00000589076 ATP5G3P48201 142 aa0.92□□□□□ -2.26
SMAD4-207ENST00000589076 KRR1Q13601 381 aaKnown RBP0.92□□□□□ -2.26
SMAD4-207ENST00000589076 RRN3P1Q2M238 152 aa0.92□□□□□ -2.26
SMAD4-207ENST00000589076 C1orf137Q5JT78 98 aa0.92□□□□□ -2.26
SMAD4-207ENST00000589076 C3orf56Q8N813 242 aa0.92□□□□□ -2.26
SMAD4-207ENST00000589076 SLC30A7Q8NEW0 376 aa0.92□□□□□ -2.26
SMAD4-207ENST00000589076 C4orf3Q8WVX3 66 aa0.92□□□□□ -2.26
SMAD4-207ENST00000589076 DGCR14Q96DF8 476 aaKnown RBP0.92□□□□□ -2.26
SMAD4-207ENST00000589076 SLAMF6Q96DU3 332 aa0.92□□□□□ -2.26
SMAD4-207ENST00000589076 LINC00526Q96FQ7 95 aa0.92□□□□□ -2.26
SMAD4-207ENST00000589076 PRADC1Q9BSG0 188 aa0.92□□□□□ -2.26
SMAD4-207ENST00000589076 C9orf16Q9BUW7 83 aa0.92□□□□□ -2.26
SMAD4-207ENST00000589076 IMUPQ9GZP8 106 aa0.92□□□□□ -2.26
SMAD4-207ENST00000589076 C6orf62Q9GZU0 229 aaPredicted RBP0.92□□□□□ -2.26
SMAD4-207ENST00000589076 BCL2L10Q9HD36 194 aa0.92□□□□□ -2.26
SMAD4-207ENST00000589076 ARMC1Q9NVT9 282 aa0.92□□□□□ -2.26
SMAD4-207ENST00000589076 C22orf24Q9Y442 160 aa0.92□□□□□ -2.26
SMAD4-207ENST00000589076 ARL5AQ9Y689 179 aa0.92□□□□□ -2.26
SMAD4-207ENST00000589076 SPTBN2O15020 2390 aa0.91□□□□□ -2.26
SMAD4-207ENST00000589076 VPS13CQ709C8 3753 aa0.91□□□□□ -2.26
SMAD4-207ENST00000589076 NESP48681 1621 aa0.91□□□□□ -2.26
SMAD4-207ENST00000589076 ATP5HO75947 161 aa0.91□□□□□ -2.26
SMAD4-207ENST00000589076 HSPE1P61604 102 aaKnown RBP0.91□□□□□ -2.26
SMAD4-207ENST00000589076 DYNLT1P63172 113 aa0.91□□□□□ -2.26
SMAD4-207ENST00000589076 DEFB113Q30KQ7 82 aa0.91□□□□□ -2.26
SMAD4-207ENST00000589076 BCL2L15Q5TBC7 163 aa0.91□□□□□ -2.26
SMAD4-207ENST00000589076 FAM19A2Q8N3H0 131 aa0.91□□□□□ -2.26
SMAD4-207ENST00000589076 PHB2Q99623 299 aa0.91□□□□□ -2.26
SMAD4-207ENST00000589076 PRUNE2Q8WUY3 3088 aa0.91□□□□□ -2.26
SMAD4-207ENST00000589076 MGAQ8IWI9 3026 aa0.91□□□□□ -2.26
SMAD4-207ENST00000589076 HEATR1Q9H583 2144 aaKnown RBP0.91□□□□□ -2.26
SMAD4-207ENST00000589076 CASP8AP2Q9UKL3 1982 aa0.9□□□□□ -2.26
SMAD4-207ENST00000589076 MIA2Q96PC5 1412 aa0.9□□□□□ -2.26
SMAD4-207ENST00000589076 NBASA2RRP1 2371 aa0.9□□□□□ -2.27
SMAD4-207ENST00000589076 F8P00451 2351 aa0.9□□□□□ -2.27
SMAD4-207ENST00000589076 ZNF736B4DX44 427 aaPredicted RBP0.9□□□□□ -2.27
SMAD4-207ENST00000589076 M0R2N4 97 aa0.9□□□□□ -2.27
SMAD4-207ENST00000589076 TIMM17BO60830 172 aa0.9□□□□□ -2.27
SMAD4-207ENST00000589076 GADD45GO95257 159 aa0.9□□□□□ -2.27
SMAD4-207ENST00000589076 ARF6P62330 175 aa0.9□□□□□ -2.27
SMAD4-207ENST00000589076 CTAG1AP78358 180 aa0.9□□□□□ -2.27
SMAD4-207ENST00000589076 TAF1AQ15573 450 aaPredicted RBP0.9□□□□□ -2.27
SMAD4-207ENST00000589076 C22orf39Q6P5X5 142 aa0.9□□□□□ -2.27
SMAD4-207ENST00000589076 Q8N814 137 aa0.9□□□□□ -2.27
SMAD4-207ENST00000589076 PXT1Q8NFP0 134 aa0.9□□□□□ -2.27
SMAD4-207ENST00000589076 OBSCN-AS1Q96MR7 158 aa0.9□□□□□ -2.27
SMAD4-207ENST00000589076 TMEM126AQ9H061 195 aa0.9□□□□□ -2.27
SMAD4-207ENST00000589076 ACER3Q9NUN7 267 aa0.9□□□□□ -2.27
SMAD4-207ENST00000589076 TNS3Q68CZ2 1445 aa0.89□□□□□ -2.27
SMAD4-207ENST00000589076 TRIOO75962 3097 aa0.89□□□□□ -2.27
SMAD4-207ENST00000589076 ADGRG4Q8IZF6 3080 aa0.89□□□□□ -2.27
SMAD4-207ENST00000589076 SRRM2Q9UQ35 2752 aaKnown RBP0.89□□□□□ -2.27
SMAD4-207ENST00000589076 SYNJ1O43426 1573 aa0.89□□□□□ -2.27
SMAD4-207ENST00000589076 NCAPD3P42695 1498 aa0.89□□□□□ -2.27
SMAD4-207ENST00000589076 INE1O15225 51 aa0.89□□□□□ -2.27
SMAD4-207ENST00000589076 NDUFB3O43676 98 aa0.89□□□□□ -2.27
SMAD4-207ENST00000589076 GGCTO75223 188 aaKnown RBP0.89□□□□□ -2.27
SMAD4-207ENST00000589076 UBE2BP63146 152 aa0.89□□□□□ -2.27
SMAD4-207ENST00000589076 TMEM254Q8TBM7 123 aa0.89□□□□□ -2.27
SMAD4-207ENST00000589076 STAG3L4Q8TBR4 150 aa0.89□□□□□ -2.27
SMAD4-207ENST00000589076 MYH3P11055 1940 aa0.89□□□□□ -2.27
SMAD4-207ENST00000589076 ATMQ13315 3056 aa0.89□□□□□ -2.27
SMAD4-207ENST00000589076 SIP14410 1827 aa0.89□□□□□ -2.27
SMAD4-207ENST00000589076 KDM6AO15550 1401 aaPredicted RBP0.89□□□□□ -2.27
SMAD4-207ENST00000589076 MYO5AQ9Y4I1 1855 aaKnown RBP0.88□□□□□ -2.27
SMAD4-207ENST00000589076 RBBP6Q7Z6E9 1792 aaKnown RBP0.88□□□□□ -2.27
SMAD4-207ENST00000589076 E9PCH4 1651 aa0.88□□□□□ -2.27
SMAD4-207ENST00000589076 ARAP1Q96P48 1450 aa0.88□□□□□ -2.27
SMAD4-207ENST00000589076 CHD3Q12873 2000 aaKnown RBP0.88□□□□□ -2.27
SMAD4-207ENST00000589076 CCDC160A6NGH7 325 aa0.88□□□□□ -2.27
SMAD4-207ENST00000589076 A8MWV9 139 aa0.88□□□□□ -2.27
SMAD4-207ENST00000589076 TAX1BP3O14907 124 aa0.88□□□□□ -2.27
SMAD4-207ENST00000589076 DHFRP00374 187 aa0.88□□□□□ -2.27
SMAD4-207ENST00000589076 C1QBP02746 253 aa0.88□□□□□ -2.27
SMAD4-207ENST00000589076 CNBPP62633 177 aaKnown RBP0.88□□□□□ -2.27
SMAD4-207ENST00000589076 MYL5Q02045 173 aa0.88□□□□□ -2.27
SMAD4-207ENST00000589076 MPV17LQ2QL34 196 aa0.88□□□□□ -2.27
SMAD4-207ENST00000589076 GDF5OSQ5U4N7 250 aa0.88□□□□□ -2.27
SMAD4-207ENST00000589076 DHRS4L2Q6PKH6 230 aa0.88□□□□□ -2.27
SMAD4-207ENST00000589076 TEX261Q6UWH6 196 aa0.88□□□□□ -2.27
SMAD4-207ENST00000589076 SOSTDC1Q6X4U4 206 aa0.88□□□□□ -2.27
SMAD4-207ENST00000589076 S100A7AQ86SG5 101 aa0.88□□□□□ -2.27
SMAD4-207ENST00000589076 PDZD9Q8IXQ8 264 aa0.88□□□□□ -2.27
SMAD4-207ENST00000589076 CANT1Q8WVQ1 401 aa0.88□□□□□ -2.27
SMAD4-207ENST00000589076 CEP19Q96LK0 163 aa0.88□□□□□ -2.27
SMAD4-207ENST00000589076 PYCARDQ9ULZ3 195 aa0.88□□□□□ -2.27
SMAD4-207ENST00000589076 ZFP30Q9Y2G7 519 aa0.88□□□□□ -2.27
SMAD4-207ENST00000589076 U3KQ87 197 aa0.88□□□□□ -2.27
SMAD4-207ENST00000589076 EML5Q05BV3 1969 aa0.88□□□□□ -2.27
SMAD4-207ENST00000589076 CSPG4Q6UVK1 2322 aa0.88□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 184.9 ms