RNA–Protein interactions for RNA: ENST00000552516.5

TGFBR1-209, Transcript of transforming growth factor beta receptor 1, humanhuman

TSL 1 (best) BASIC

Gene TGFBR1, Length 5,933 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-209ENST00000552516 HOXA5P20719 270 aa8.61□□□□□ -1.03
TGFBR1-209ENST00000552516 NSUN5P1Q3KNT7 163 aa8.61□□□□□ -1.03
TGFBR1-209ENST00000552516 NAA38Q9BRA0 125 aaKnown RBP8.61□□□□□ -1.03
TGFBR1-209ENST00000552516 MAP1LC3CQ9BXW4 147 aa8.61□□□□□ -1.03
TGFBR1-209ENST00000552516 DDTP30046 118 aa8.61□□□□□ -1.03
TGFBR1-209ENST00000552516 RPP21Q9H633 154 aaKnown RBP8.61□□□□□ -1.03
TGFBR1-209ENST00000552516 FCN3O75636 299 aa8.61□□□□□ -1.03
TGFBR1-209ENST00000552516 BLCAPP62952 87 aa8.61□□□□□ -1.03
TGFBR1-209ENST00000552516 HBBP68871 147 aa8.61□□□□□ -1.03
TGFBR1-209ENST00000552516 DEFB136Q30KP8 78 aa8.61□□□□□ -1.03
TGFBR1-209ENST00000552516 ZNF256Q9Y2P7 627 aaPredicted RBP8.61□□□□□ -1.03
TGFBR1-209ENST00000552516 TRAV41A0A0B4J266 112 aa8.6□□□□□ -1.03
TGFBR1-209ENST00000552516 F6UB75 175 aa8.6□□□□□ -1.03
TGFBR1-209ENST00000552516 H3BVH4 76 aa8.6□□□□□ -1.03
TGFBR1-209ENST00000552516 IGHV4-38-2P0DP08 117 aa8.6□□□□□ -1.03
TGFBR1-209ENST00000552516 GATA4P43694 442 aa8.6□□□□□ -1.03
TGFBR1-209ENST00000552516 ODF3L1Q8IXM7 274 aa8.6□□□□□ -1.03
TGFBR1-209ENST00000552516 USP24Q9UPU5 2620 aa8.6□□□□□ -1.03
TGFBR1-209ENST00000552516 ATG2AQ2TAZ0 1938 aa8.6□□□□□ -1.03
TGFBR1-209ENST00000552516 LHBP01229 141 aa8.6□□□□□ -1.03
TGFBR1-209ENST00000552516 Q8NFD4 153 aa8.6□□□□□ -1.03
TGFBR1-209ENST00000552516 OR5AN1Q8NGI8 311 aa8.6□□□□□ -1.03
TGFBR1-209ENST00000552516 HLA-DQA1P01909 254 aa8.6□□□□□ -1.03
TGFBR1-209ENST00000552516 IGHV4-30-2A0A087WSY4 118 aa8.6□□□□□ -1.03
TGFBR1-209ENST00000552516 PSMB11A5LHX3 300 aa8.6□□□□□ -1.03
TGFBR1-209ENST00000552516 PSMG4Q5JS54 123 aa8.6□□□□□ -1.03
TGFBR1-209ENST00000552516 C8orf46Q8TAG6 207 aa8.6□□□□□ -1.03
TGFBR1-209ENST00000552516 ADAMTS20P59510 1910 aa8.6□□□□□ -1.03
TGFBR1-209ENST00000552516 A0A1B0GWJ7 208 aa8.59□□□□□ -1.03
TGFBR1-209ENST00000552516 FAM106AQ4KMX7 169 aa8.59□□□□□ -1.03
TGFBR1-209ENST00000552516 C5orf52A6NGY3 159 aa8.59□□□□□ -1.03
TGFBR1-209ENST00000552516 LINC01548A6NM66 108 aa8.59□□□□□ -1.03
TGFBR1-209ENST00000552516 ZNF56Q15929 161 aa8.59□□□□□ -1.03
TGFBR1-209ENST00000552516 A6NNC1 897 aa8.59□□□□□ -1.03
TGFBR1-209ENST00000552516 PRTN3P24158 256 aa8.59□□□□□ -1.03
TGFBR1-209ENST00000552516 LRBAP50851 2863 aa8.59□□□□□ -1.03
TGFBR1-209ENST00000552516 EBLN2Q6P2I7 272 aa8.59□□□□□ -1.03
TGFBR1-209ENST00000552516 NRN1Q9NPD7 142 aa8.59□□□□□ -1.03
TGFBR1-209ENST00000552516 TMEM160Q9NX00 188 aa8.59□□□□□ -1.03
TGFBR1-209ENST00000552516 IFITM10A6NMD0 228 aa8.59□□□□□ -1.03
TGFBR1-209ENST00000552516 ZNF295-AS1Q8N0V1 137 aa8.59□□□□□ -1.03
TGFBR1-209ENST00000552516 TRAV8-6A0A0B4J262 113 aa8.58□□□□□ -1.04
TGFBR1-209ENST00000552516 SYNJ2BPP57105 145 aa8.58□□□□□ -1.04
TGFBR1-209ENST00000552516 PAX8Q06710 450 aa8.58□□□□□ -1.04
TGFBR1-209ENST00000552516 FOXL1Q12952 345 aa8.58□□□□□ -1.04
TGFBR1-209ENST00000552516 ZNF833PQ6ZTB9 187 aa8.58□□□□□ -1.04
TGFBR1-209ENST00000552516 HIST3H2BBQ8N257 126 aa8.58□□□□□ -1.04
TGFBR1-209ENST00000552516 CDC42EP3Q9UKI2 254 aa8.58□□□□□ -1.04
TGFBR1-209ENST00000552516 A0A1B0GUT8 65 aa8.58□□□□□ -1.04
TGFBR1-209ENST00000552516 TMEM213A2RRL7 107 aa8.58□□□□□ -1.04
TGFBR1-209ENST00000552516 SRSF2Q01130 221 aaKnown RBP8.58□□□□□ -1.04
TGFBR1-209ENST00000552516 NUP35Q8NFH5 326 aa8.58□□□□□ -1.04
TGFBR1-209ENST00000552516 TMEM249Q2WGJ8 235 aa8.58□□□□□ -1.04
TGFBR1-209ENST00000552516 NUDT3O95989 172 aa8.58□□□□□ -1.04
TGFBR1-209ENST00000552516 PKIAP61925 76 aa8.58□□□□□ -1.04
TGFBR1-209ENST00000552516 DGAT2L7PQ6IED9 249 aa8.58□□□□□ -1.04
TGFBR1-209ENST00000552516 SCGB1D4Q6XE38 83 aa8.58□□□□□ -1.04
TGFBR1-209ENST00000552516 TXNDC17Q9BRA2 123 aa8.58□□□□□ -1.04
TGFBR1-209ENST00000552516 TEX36Q5VZQ5 186 aa8.58□□□□□ -1.04
TGFBR1-209ENST00000552516 OR4X2Q8NGF9 303 aa8.58□□□□□ -1.04
TGFBR1-209ENST00000552516 SLC25A2Q9BXI2 301 aa8.58□□□□□ -1.04
TGFBR1-209ENST00000552516 KLHDC1Q8N7A1 406 aa8.57□□□□□ -1.04
TGFBR1-209ENST00000552516 IGHV3-64A0A075B6Q5 118 aa8.57□□□□□ -1.04
TGFBR1-209ENST00000552516 TRAV30A0A087WSZ9 112 aa8.57□□□□□ -1.04
TGFBR1-209ENST00000552516 CD7P09564 240 aa8.57□□□□□ -1.04
TGFBR1-209ENST00000552516 C21orf62-AS1Q17RA5 79 aa8.57□□□□□ -1.04
TGFBR1-209ENST00000552516 C1orf122Q6ZSJ8 110 aa8.57□□□□□ -1.04
TGFBR1-209ENST00000552516 BCL6BQ8N143 479 aaPredicted RBP8.57□□□□□ -1.04
TGFBR1-209ENST00000552516 PRELID3AQ96N28 172 aa8.57□□□□□ -1.04
TGFBR1-209ENST00000552516 TRAV12-2A0A075B6T6 113 aa8.57□□□□□ -1.04
TGFBR1-209ENST00000552516 A0A1W2PRE2 83 aa8.57□□□□□ -1.04
TGFBR1-209ENST00000552516 Q96MF0 132 aa8.57□□□□□ -1.04
TGFBR1-209ENST00000552516 AP5S1Q9NUS5 200 aa8.57□□□□□ -1.04
TGFBR1-209ENST00000552516 CFAP46Q8IYW2 2715 aa8.57□□□□□ -1.04
TGFBR1-209ENST00000552516 TRAV12-3A0A0B4J271 114 aa8.57□□□□□ -1.04
TGFBR1-209ENST00000552516 K7EN84 100 aa8.57□□□□□ -1.04
TGFBR1-209ENST00000552516 M0R143 59 aa8.57□□□□□ -1.04
TGFBR1-209ENST00000552516 ARMS2P0C7Q2 107 aa8.57□□□□□ -1.04
TGFBR1-209ENST00000552516 LYZL1Q6UWQ5 148 aa8.57□□□□□ -1.04
TGFBR1-209ENST00000552516 AMN1Q8IY45 258 aa8.57□□□□□ -1.04
TGFBR1-209ENST00000552516 TMEM170AQ8WVE7 144 aa8.57□□□□□ -1.04
TGFBR1-209ENST00000552516 TMEM191AQ9H0A3 160 aa8.57□□□□□ -1.04
TGFBR1-209ENST00000552516 KNCNA6PVL3 124 aa8.56□□□□□ -1.04
TGFBR1-209ENST00000552516 UBE2E2Q96LR5 201 aa8.56□□□□□ -1.04
TGFBR1-209ENST00000552516 A0A087WWC5 75 aa8.56□□□□□ -1.04
TGFBR1-209ENST00000552516 HOXB4P17483 251 aaPredicted RBP8.56□□□□□ -1.04
TGFBR1-209ENST00000552516 FAM159AQ6UWV7 190 aa8.56□□□□□ -1.04
TGFBR1-209ENST00000552516 IGHV4-59P01825 116 aa8.56□□□□□ -1.04
TGFBR1-209ENST00000552516 Q1RN00 199 aa8.56□□□□□ -1.04
TGFBR1-209ENST00000552516 FAM169BQ8N8A8 192 aa8.56□□□□□ -1.04
TGFBR1-209ENST00000552516 FER1L6-AS1Q8NA97 138 aa8.56□□□□□ -1.04
TGFBR1-209ENST00000552516 NDUFS6O75380 124 aaKnown RBP8.56□□□□□ -1.04
TGFBR1-209ENST00000552516 IGHV3-53P01767 116 aa8.56□□□□□ -1.04
TGFBR1-209ENST00000552516 CFHR2P36980 270 aa8.56□□□□□ -1.04
TGFBR1-209ENST00000552516 TRAV26-2A0A0B4J265 109 aa8.55□□□□□ -1.04
TGFBR1-209ENST00000552516 IGLC7A0M8Q6 106 aa8.55□□□□□ -1.04
TGFBR1-209ENST00000552516 TCF21O43680 179 aa8.55□□□□□ -1.04
TGFBR1-209ENST00000552516 IGHV4-39P01824 125 aa8.55□□□□□ -1.04
TGFBR1-209ENST00000552516 HTN3P15516 51 aa8.55□□□□□ -1.04
TGFBR1-209ENST00000552516 BMI1P35226 326 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 144.8 ms