RNA–Protein interactions for RNA: ENST00000522557.1

HMGB1P1-201, Transcript of high mobility group box 1 pseudogene 1, humanhuman

BASIC

Gene HMGB1P1, Length 636 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P1-201ENST00000522557 FREM2Q5SZK8 3169 aa1.8□□□□□ -2.12
HMGB1P1-201ENST00000522557 CELSR3Q9NYQ7 3312 aa1.8□□□□□ -2.12
HMGB1P1-201ENST00000522557 TLN2Q9Y4G6 2542 aa1.8□□□□□ -2.12
HMGB1P1-201ENST00000522557 COL6A5A8TX70 2615 aa1.8□□□□□ -2.12
HMGB1P1-201ENST00000522557 ASPMQ8IZT6 3477 aa1.79□□□□□ -2.12
HMGB1P1-201ENST00000522557 DNAJC13O75165 2243 aa1.79□□□□□ -2.12
HMGB1P1-201ENST00000522557 ATRQ13535 2644 aa1.79□□□□□ -2.12
HMGB1P1-201ENST00000522557 TRAV7A0A075B6U4 112 aa1.79□□□□□ -2.12
HMGB1P1-201ENST00000522557 TMSB15BA0A087X1C1 80 aa1.79□□□□□ -2.12
HMGB1P1-201ENST00000522557 A0A0J9YY10 115 aa1.79□□□□□ -2.12
HMGB1P1-201ENST00000522557 TMEM269A0A1B0GVZ9 245 aa1.79□□□□□ -2.12
HMGB1P1-201ENST00000522557 A0A1B0GX78 115 aa1.79□□□□□ -2.12
HMGB1P1-201ENST00000522557 PQLC2LA1A4F0 135 aa1.79□□□□□ -2.12
HMGB1P1-201ENST00000522557 FNDC10F2Z333 226 aa1.79□□□□□ -2.12
HMGB1P1-201ENST00000522557 RPSAP08865 295 aaKnown RBP1.79□□□□□ -2.12
HMGB1P1-201ENST00000522557 LGALS1P09382 135 aaKnown RBP1.79□□□□□ -2.12
HMGB1P1-201ENST00000522557 PIRTP0C851 137 aa1.79□□□□□ -2.12
HMGB1P1-201ENST00000522557 G0S2P27469 103 aa1.79□□□□□ -2.12
HMGB1P1-201ENST00000522557 RPL28P46779 137 aaKnown RBP1.79□□□□□ -2.12
HMGB1P1-201ENST00000522557 SERPINB9P50453 376 aa1.79□□□□□ -2.12
HMGB1P1-201ENST00000522557 OR4D2P58180 307 aa1.79□□□□□ -2.12
HMGB1P1-201ENST00000522557 RAB14P61106 215 aa1.79□□□□□ -2.12
HMGB1P1-201ENST00000522557 AKR1C1Q04828 323 aa1.79□□□□□ -2.12
HMGB1P1-201ENST00000522557 SPA17Q15506 151 aa1.79□□□□□ -2.12
HMGB1P1-201ENST00000522557 DEFB113Q30KQ7 82 aa1.79□□□□□ -2.12
HMGB1P1-201ENST00000522557 AKIRIN2Q53H80 203 aa1.79□□□□□ -2.12
HMGB1P1-201ENST00000522557 PHF13Q86YI8 300 aaPredicted RBP1.79□□□□□ -2.12
HMGB1P1-201ENST00000522557 OR51T1Q8NGJ9 327 aa1.79□□□□□ -2.12
HMGB1P1-201ENST00000522557 CEP19Q96LK0 163 aa1.79□□□□□ -2.12
HMGB1P1-201ENST00000522557 MCEEQ96PE7 176 aa1.79□□□□□ -2.12
HMGB1P1-201ENST00000522557 LYSMD1Q96S90 227 aa1.79□□□□□ -2.12
HMGB1P1-201ENST00000522557 SMR3AQ99954 134 aa1.79□□□□□ -2.12
HMGB1P1-201ENST00000522557 SNRNP25Q9BV90 132 aaKnown RBP1.79□□□□□ -2.12
HMGB1P1-201ENST00000522557 TRABDQ9H4I3 376 aa1.79□□□□□ -2.12
HMGB1P1-201ENST00000522557 SAMHD1Q9Y3Z3 626 aaKnown RBP1.79□□□□□ -2.12
HMGB1P1-201ENST00000522557 SCN8AQ9UQD0 1980 aa1.79□□□□□ -2.12
HMGB1P1-201ENST00000522557 ALPK2Q86TB3 2170 aa1.79□□□□□ -2.12
HMGB1P1-201ENST00000522557 ROS1P08922 2347 aa1.79□□□□□ -2.12
HMGB1P1-201ENST00000522557 STAB1Q9NY15 2570 aa1.79□□□□□ -2.12
HMGB1P1-201ENST00000522557 LAMA1P25391 3075 aa1.78□□□□□ -2.12
HMGB1P1-201ENST00000522557 ABCA1O95477 2261 aa1.78□□□□□ -2.12
HMGB1P1-201ENST00000522557 USF3Q68DE3 2245 aa1.78□□□□□ -2.12
HMGB1P1-201ENST00000522557 TRAV41A0A0B4J266 112 aa1.78□□□□□ -2.12
HMGB1P1-201ENST00000522557 IGHV1-18A0A0C4DH31 117 aa1.78□□□□□ -2.12
HMGB1P1-201ENST00000522557 I3L521 148 aa1.78□□□□□ -2.12
HMGB1P1-201ENST00000522557 FAAHO00519 579 aa1.78□□□□□ -2.12
HMGB1P1-201ENST00000522557 TXNDC9O14530 226 aa1.78□□□□□ -2.12
HMGB1P1-201ENST00000522557 FADS1O60427 444 aa1.78□□□□□ -2.12
HMGB1P1-201ENST00000522557 SERPINA1P01009 418 aa1.78□□□□□ -2.12
HMGB1P1-201ENST00000522557 GNG10P50151 68 aa1.78□□□□□ -2.12
HMGB1P1-201ENST00000522557 PSME3P61289 254 aa1.78□□□□□ -2.12
HMGB1P1-201ENST00000522557 SNRPD2P62316 118 aaKnown RBP1.78□□□□□ -2.12
HMGB1P1-201ENST00000522557 PLGLB1Q02325 96 aa1.78□□□□□ -2.12
HMGB1P1-201ENST00000522557 IAH1Q2TAA2 248 aaPredicted RBP1.78□□□□□ -2.12
HMGB1P1-201ENST00000522557 DEFB110Q30KQ9 67 aa1.78□□□□□ -2.12
HMGB1P1-201ENST00000522557 GLT8D1Q68CQ7 371 aa1.78□□□□□ -2.12
HMGB1P1-201ENST00000522557 LPCAT3Q6P1A2 487 aa1.78□□□□□ -2.12
HMGB1P1-201ENST00000522557 S100A7AQ86SG5 101 aa1.78□□□□□ -2.12
HMGB1P1-201ENST00000522557 RPS19BP1Q86WX3 136 aaKnown RBP1.78□□□□□ -2.12
HMGB1P1-201ENST00000522557 C9orf163Q8N9P6 203 aa1.78□□□□□ -2.12
HMGB1P1-201ENST00000522557 WFDC11Q8NEX6 87 aa1.78□□□□□ -2.12
HMGB1P1-201ENST00000522557 OR4X1Q8NH49 305 aa1.78□□□□□ -2.12
HMGB1P1-201ENST00000522557 PSMF1Q92530 271 aa1.78□□□□□ -2.12
HMGB1P1-201ENST00000522557 TSPAN32Q96QS1 320 aa1.78□□□□□ -2.12
HMGB1P1-201ENST00000522557 NIPSNAP1Q9BPW8 284 aa1.78□□□□□ -2.12
HMGB1P1-201ENST00000522557 EFCAB1Q9HAE3 211 aa1.78□□□□□ -2.12
HMGB1P1-201ENST00000522557 C14orf105Q9NVL8 296 aa1.78□□□□□ -2.12
HMGB1P1-201ENST00000522557 PAQR5Q9NXK6 330 aaPredicted RBP1.78□□□□□ -2.12
HMGB1P1-201ENST00000522557 TP73-AS1Q9UF72 201 aa1.78□□□□□ -2.12
HMGB1P1-201ENST00000522557 LAMA5O15230 3695 aa1.78□□□□□ -2.12
HMGB1P1-201ENST00000522557 FBN2P35556 2912 aa1.78□□□□□ -2.12
HMGB1P1-201ENST00000522557 COL12A1Q99715 3063 aa1.77□□□□□ -2.13
HMGB1P1-201ENST00000522557 TRBV20OR9-2A0A075B6H5 130 aa1.77□□□□□ -2.13
HMGB1P1-201ENST00000522557 ARRDC5A6NEK1 342 aa1.77□□□□□ -2.13
HMGB1P1-201ENST00000522557 E5RI56 91 aa1.77□□□□□ -2.13
HMGB1P1-201ENST00000522557 CNIH1O95406 144 aa1.77□□□□□ -2.13
HMGB1P1-201ENST00000522557 IGKV1-5P01602 117 aa1.77□□□□□ -2.13
HMGB1P1-201ENST00000522557 HLA-DRB1P01911 266 aa1.77□□□□□ -2.13
HMGB1P1-201ENST00000522557 CD79AP11912 226 aa1.77□□□□□ -2.13
HMGB1P1-201ENST00000522557 COX6A1P12074 109 aa1.77□□□□□ -2.13
HMGB1P1-201ENST00000522557 CMPK1P30085 196 aa1.77□□□□□ -2.13
HMGB1P1-201ENST00000522557 CSN1S1P47710 185 aa1.77□□□□□ -2.13
HMGB1P1-201ENST00000522557 RAB13P51153 203 aa1.77□□□□□ -2.13
HMGB1P1-201ENST00000522557 RPS20P60866 119 aaKnown RBP1.77□□□□□ -2.13
HMGB1P1-201ENST00000522557 ARF6P62330 175 aa1.77□□□□□ -2.13
HMGB1P1-201ENST00000522557 TAF1AQ15573 450 aaPredicted RBP1.77□□□□□ -2.13
HMGB1P1-201ENST00000522557 Q6ZS49 121 aa1.77□□□□□ -2.13
HMGB1P1-201ENST00000522557 RPP25LQ8N5L8 163 aaKnown RBP1.77□□□□□ -2.13
HMGB1P1-201ENST00000522557 RNASE11Q8TAA1 199 aaKnown RBP1.77□□□□□ -2.13
HMGB1P1-201ENST00000522557 SKA2Q8WVK7 121 aaPredicted RBP1.77□□□□□ -2.13
HMGB1P1-201ENST00000522557 MRPS24Q96EL2 167 aaKnown RBP1.77□□□□□ -2.13
HMGB1P1-201ENST00000522557 C20orf27Q9GZN8 174 aa1.77□□□□□ -2.13
HMGB1P1-201ENST00000522557 WDR61Q9GZS3 305 aaKnown RBP1.77□□□□□ -2.13
HMGB1P1-201ENST00000522557 TLNRD1Q9H1K6 362 aa1.77□□□□□ -2.13
HMGB1P1-201ENST00000522557 DCSTAMPQ9H295 470 aa1.77□□□□□ -2.13
HMGB1P1-201ENST00000522557 FAM96AQ9H5X1 160 aa1.77□□□□□ -2.13
HMGB1P1-201ENST00000522557 LRTM1Q9HBL6 345 aa1.77□□□□□ -2.13
HMGB1P1-201ENST00000522557 PKIGQ9Y2B9 76 aa1.77□□□□□ -2.13
HMGB1P1-201ENST00000522557 ARL2BPQ9Y2Y0 163 aa1.77□□□□□ -2.13
HMGB1P1-201ENST00000522557 V9GYQ6 96 aa1.77□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms