RNA–Protein interactions for RNA: ENST00000420996.2

UPF3AP3-201, Transcript of UPF3A pseudogene 3, humanhuman

BASIC

Gene UPF3AP3, Length 769 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP3-201ENST00000420996 OR5G3P0C626 314 aa11.7□□□□□ -0.54
UPF3AP3-201ENST00000420996 LINC00869P0C866 280 aa11.7□□□□□ -0.54
UPF3AP3-201ENST00000420996 BTF3P20290 206 aaKnown RBP11.7□□□□□ -0.54
UPF3AP3-201ENST00000420996 SELENOTP62341 195 aa11.7□□□□□ -0.54
UPF3AP3-201ENST00000420996 OR5I1Q13606 314 aa11.7□□□□□ -0.54
UPF3AP3-201ENST00000420996 LINC00612Q8N6U2 182 aa11.7□□□□□ -0.54
UPF3AP3-201ENST00000420996 RAB2BQ8WUD1 216 aa11.7□□□□□ -0.54
UPF3AP3-201ENST00000420996 RPUSD4Q96CM3 377 aaKnown RBP11.7□□□□□ -0.54
UPF3AP3-201ENST00000420996 UHRF2Q96PU4 802 aa11.7□□□□□ -0.54
UPF3AP3-201ENST00000420996 C20orf144Q9BQM9 153 aa11.7□□□□□ -0.54
UPF3AP3-201ENST00000420996 SLC25A21Q9BQT8 299 aaPredicted RBP11.7□□□□□ -0.54
UPF3AP3-201ENST00000420996 TRAV26-1A0A087WT03 109 aa11.69□□□□□ -0.54
UPF3AP3-201ENST00000420996 A0A1W2PPQ1 181 aa11.69□□□□□ -0.54
UPF3AP3-201ENST00000420996 ADAP1O75689 374 aa11.69□□□□□ -0.54
UPF3AP3-201ENST00000420996 M6PRP20645 277 aa11.69□□□□□ -0.54
UPF3AP3-201ENST00000420996 AP3S2P59780 193 aa11.69□□□□□ -0.54
UPF3AP3-201ENST00000420996 KRTAP10-2P60368 255 aa11.69□□□□□ -0.54
UPF3AP3-201ENST00000420996 PPP1R1AQ13522 171 aa11.69□□□□□ -0.54
UPF3AP3-201ENST00000420996 UPK3BQ9BT76 320 aa11.69□□□□□ -0.54
UPF3AP3-201ENST00000420996 RNF24Q9Y225 148 aa11.69□□□□□ -0.54
UPF3AP3-201ENST00000420996 ZNF701M0R085 212 aaPredicted RBP11.68□□□□□ -0.54
UPF3AP3-201ENST00000420996 ID3Q02535 119 aa11.68□□□□□ -0.54
UPF3AP3-201ENST00000420996 TOMM5Q8N4H5 51 aa11.68□□□□□ -0.54
UPF3AP3-201ENST00000420996 TRIM63Q969Q1 353 aa11.68□□□□□ -0.54
UPF3AP3-201ENST00000420996 BCL7BQ9BQE9 202 aa11.68□□□□□ -0.54
UPF3AP3-201ENST00000420996 SLIRPQ9GZT3 109 aaKnown RBP11.68□□□□□ -0.54
UPF3AP3-201ENST00000420996 PMS2P5A8MQ11 134 aa11.67□□□□□ -0.54
UPF3AP3-201ENST00000420996 H3BNG1 76 aa11.67□□□□□ -0.54
UPF3AP3-201ENST00000420996 MRPS12O15235 138 aaKnown RBP11.67□□□□□ -0.54
UPF3AP3-201ENST00000420996 PRB4P10163 310 aaPredicted RBP11.67□□□□□ -0.54
UPF3AP3-201ENST00000420996 CXCL2P19875 107 aa11.67□□□□□ -0.54
UPF3AP3-201ENST00000420996 ANXA7P20073 488 aaKnown RBP11.67□□□□□ -0.54
UPF3AP3-201ENST00000420996 TMBIM6P55061 237 aa11.67□□□□□ -0.54
UPF3AP3-201ENST00000420996 ESRGQ1W209 222 aa11.67□□□□□ -0.54
UPF3AP3-201ENST00000420996 PATE2Q6UY27 113 aa11.67□□□□□ -0.54
UPF3AP3-201ENST00000420996 CCDC28AQ8IWP9 274 aa11.67□□□□□ -0.54
UPF3AP3-201ENST00000420996 ARL6Q9H0F7 186 aa11.67□□□□□ -0.54
UPF3AP3-201ENST00000420996 ZNF331Q9NQX6 463 aaPredicted RBP11.67□□□□□ -0.54
UPF3AP3-201ENST00000420996 PSENENQ9NZ42 101 aa11.67□□□□□ -0.54
UPF3AP3-201ENST00000420996 APOBP04114 4563 aaKnown RBP11.67□□□□□ -0.54
UPF3AP3-201ENST00000420996 A0A0J9YY99 117 aa11.66□□□□□ -0.54
UPF3AP3-201ENST00000420996 K7EPK0 472 aa11.66□□□□□ -0.54
UPF3AP3-201ENST00000420996 HOXA5P20719 270 aa11.66□□□□□ -0.54
UPF3AP3-201ENST00000420996 POLR2GP62487 172 aaKnown RBP eCLIP11.66□□□□□ -0.54
UPF3AP3-201ENST00000420996 KIR3DS1Q14943 382 aa11.66□□□□□ -0.54
UPF3AP3-201ENST00000420996 LCN15Q6UWW0 184 aa11.66□□□□□ -0.54
UPF3AP3-201ENST00000420996 DEDD2Q8WXF8 326 aa11.66□□□□□ -0.54
UPF3AP3-201ENST00000420996 SLC50A1Q9BRV3 221 aa11.66□□□□□ -0.54
UPF3AP3-201ENST00000420996 NPVFQ9HCQ7 196 aa11.66□□□□□ -0.54
UPF3AP3-201ENST00000420996 MRPS16Q9Y3D3 137 aaKnown RBP11.66□□□□□ -0.54
UPF3AP3-201ENST00000420996 FNDC10F2Z333 226 aa11.65□□□□□ -0.54
UPF3AP3-201ENST00000420996 RLN2P04090 185 aa11.65□□□□□ -0.54
UPF3AP3-201ENST00000420996 RRAS2P62070 204 aaPredicted RBP11.65□□□□□ -0.54
UPF3AP3-201ENST00000420996 DLK1P80370 383 aa11.65□□□□□ -0.54
UPF3AP3-201ENST00000420996 PXDC1Q5TGL8 231 aa11.65□□□□□ -0.54
UPF3AP3-201ENST00000420996 MCFD2Q8NI22 146 aa11.65□□□□□ -0.54
UPF3AP3-201ENST00000420996 SMIM8Q96KF7 97 aa11.65□□□□□ -0.54
UPF3AP3-201ENST00000420996 ARV1Q9H2C2 271 aa11.65□□□□□ -0.54
UPF3AP3-201ENST00000420996 GAGE12BA1L429 117 aa11.64□□□□□ -0.55
UPF3AP3-201ENST00000420996 SNURFLB1AK76 121 aa11.64□□□□□ -0.55
UPF3AP3-201ENST00000420996 H3BMQ9 156 aa11.64□□□□□ -0.55
UPF3AP3-201ENST00000420996 GAGE7O76087 117 aa11.64□□□□□ -0.55
UPF3AP3-201ENST00000420996 GAGE12FP0CL80 117 aa11.64□□□□□ -0.55
UPF3AP3-201ENST00000420996 GAGE12GP0CL81 117 aa11.64□□□□□ -0.55
UPF3AP3-201ENST00000420996 GAGE12IP0CL82 117 aa11.64□□□□□ -0.55
UPF3AP3-201ENST00000420996 UBE2MP61081 183 aaKnown RBP11.64□□□□□ -0.55
UPF3AP3-201ENST00000420996 PYDC2Q56P42 97 aa11.64□□□□□ -0.55
UPF3AP3-201ENST00000420996 GFI1BQ5VTD9 330 aa11.64□□□□□ -0.55
UPF3AP3-201ENST00000420996 TEPPQ6URK8 271 aa11.64□□□□□ -0.55
UPF3AP3-201ENST00000420996 PARD6GQ9BYG4 376 aaPredicted RBP11.64□□□□□ -0.55
UPF3AP3-201ENST00000420996 ZNF586Q9NXT0 402 aa11.64□□□□□ -0.55
UPF3AP3-201ENST00000420996 DNAH5Q8TE73 4624 aa11.63□□□□□ -0.55
UPF3AP3-201ENST00000420996 SSSCA1O60232 199 aa11.63□□□□□ -0.55
UPF3AP3-201ENST00000420996 CCNKO75909 580 aa11.63□□□□□ -0.55
UPF3AP3-201ENST00000420996 C4orf46Q504U0 113 aa11.63□□□□□ -0.55
UPF3AP3-201ENST00000420996 LINC00305Q7Z4B0 112 aa11.63□□□□□ -0.55
UPF3AP3-201ENST00000420996 CCDC190Q86UF4 302 aa11.63□□□□□ -0.55
UPF3AP3-201ENST00000420996 C9orf170A2RU37 121 aa11.62□□□□□ -0.55
UPF3AP3-201ENST00000420996 GOSR2O14653 212 aa11.62□□□□□ -0.55
UPF3AP3-201ENST00000420996 SNRPCP09234 159 aaKnown RBP11.62□□□□□ -0.55
UPF3AP3-201ENST00000420996 METTL15P1P0C7V9 234 aa11.62□□□□□ -0.55
UPF3AP3-201ENST00000420996 SLC38A11Q08AI6 406 aa11.62□□□□□ -0.55
UPF3AP3-201ENST00000420996 TMEM14EPQ6UXP3 125 aa11.62□□□□□ -0.55
UPF3AP3-201ENST00000420996 BPIFA4PQ86YQ2 179 aa11.62□□□□□ -0.55
UPF3AP3-201ENST00000420996 OR10P1Q8NGE3 313 aa11.62□□□□□ -0.55
UPF3AP3-201ENST00000420996 MGAT4CQ9UBM8 478 aa11.62□□□□□ -0.55
UPF3AP3-201ENST00000420996 PRAC2D3DTV9 90 aa11.61□□□□□ -0.55
UPF3AP3-201ENST00000420996 DAZ2Q13117 558 aaKnown RBP11.61□□□□□ -0.55
UPF3AP3-201ENST00000420996 ZNF546Q86UE3 836 aa11.61□□□□□ -0.55
UPF3AP3-201ENST00000420996 ZBTB8BQ8NAP8 495 aaPredicted RBP11.61□□□□□ -0.55
UPF3AP3-201ENST00000420996 PXMP4Q9Y6I8 212 aa11.61□□□□□ -0.55
UPF3AP3-201ENST00000420996 V9GYH0 126 aa11.61□□□□□ -0.55
UPF3AP3-201ENST00000420996 EPM2AB3EWF7 344 aa11.6□□□□□ -0.55
UPF3AP3-201ENST00000420996 SLC17A3O00476 420 aa11.6□□□□□ -0.55
UPF3AP3-201ENST00000420996 AGPAT2O15120 278 aa11.6□□□□□ -0.55
UPF3AP3-201ENST00000420996 NOL3O60936 208 aaKnown RBP11.6□□□□□ -0.55
UPF3AP3-201ENST00000420996 LINC00315P59091 139 aa11.6□□□□□ -0.55
UPF3AP3-201ENST00000420996 Q6ZRN7 208 aaPredicted RBP11.6□□□□□ -0.55
UPF3AP3-201ENST00000420996 VSIG2Q96IQ7 327 aa11.6□□□□□ -0.55
UPF3AP3-201ENST00000420996 ODF3Q96PU9 254 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms