RNA–Protein interactions for RNA: ENST00000411896.6

GRAMD1A-202, Transcript of GRAM domain containing 1A, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene GRAMD1A, Length 2,523 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1A-202ENST00000411896 ZNF414Q96IQ9 312 aa13.19□□□□□ -0.3
GRAMD1A-202ENST00000411896 PSG8Q9UQ74 426 aa13.19□□□□□ -0.3
GRAMD1A-202ENST00000411896 LRBAP50851 2863 aa13.19□□□□□ -0.3
GRAMD1A-202ENST00000411896 TACC2O95359 2948 aa13.18□□□□□ -0.3
GRAMD1A-202ENST00000411896 CEACAM3P40198 252 aa13.18□□□□□ -0.3
GRAMD1A-202ENST00000411896 NDPQ00604 133 aa13.18□□□□□ -0.3
GRAMD1A-202ENST00000411896 LINC00173Q6ZV60 143 aa13.18□□□□□ -0.3
GRAMD1A-202ENST00000411896 ANKHD1Q8IWZ3 2542 aaKnown RBP13.18□□□□□ -0.3
GRAMD1A-202ENST00000411896 IGHV1-24A0A0C4DH33 117 aa13.18□□□□□ -0.3
GRAMD1A-202ENST00000411896 M0R1W7 72 aa13.18□□□□□ -0.3
GRAMD1A-202ENST00000411896 M0R3E3 92 aa13.18□□□□□ -0.3
GRAMD1A-202ENST00000411896 TFPI2P48307 235 aa13.18□□□□□ -0.3
GRAMD1A-202ENST00000411896 HNRNPA3P51991 378 aaKnown RBP13.18□□□□□ -0.3
GRAMD1A-202ENST00000411896 C11orf71Q6IPW1 123 aa13.18□□□□□ -0.3
GRAMD1A-202ENST00000411896 DYNAPQ8N1N2 210 aa13.18□□□□□ -0.3
GRAMD1A-202ENST00000411896 TPRP12270 2363 aaKnown RBP13.18□□□□□ -0.3
GRAMD1A-202ENST00000411896 IGLV11-55A0A075B6I3 123 aa13.17□□□□□ -0.3
GRAMD1A-202ENST00000411896 GNG7O60262 68 aa13.17□□□□□ -0.3
GRAMD1A-202ENST00000411896 PRTN3P24158 256 aa13.17□□□□□ -0.3
GRAMD1A-202ENST00000411896 PSG3Q16557 428 aa13.17□□□□□ -0.3
GRAMD1A-202ENST00000411896 KLHDC1Q8N7A1 406 aa13.17□□□□□ -0.3
GRAMD1A-202ENST00000411896 TRAV9-2A0A087WT02 112 aa13.17□□□□□ -0.3
GRAMD1A-202ENST00000411896 F8W735 103 aaPredicted RBP13.17□□□□□ -0.3
GRAMD1A-202ENST00000411896 CIDEAO60543 219 aa13.17□□□□□ -0.3
GRAMD1A-202ENST00000411896 CRIP1P50238 77 aa13.17□□□□□ -0.3
GRAMD1A-202ENST00000411896 FAM162BQ5T6X4 162 aa13.17□□□□□ -0.3
GRAMD1A-202ENST00000411896 CHCHD1Q96BP2 118 aaKnown RBP13.17□□□□□ -0.3
GRAMD1A-202ENST00000411896 RNF24Q9Y225 148 aa13.17□□□□□ -0.3
GRAMD1A-202ENST00000411896 RELNP78509 3460 aa13.17□□□□□ -0.3
GRAMD1A-202ENST00000411896 ABCA4P78363 2273 aa13.16□□□□□ -0.3
GRAMD1A-202ENST00000411896 K7EP13 123 aa13.16□□□□□ -0.3
GRAMD1A-202ENST00000411896 ARMS2P0C7Q2 107 aa13.16□□□□□ -0.3
GRAMD1A-202ENST00000411896 LYPD1Q8N2G4 141 aa13.16□□□□□ -0.3
GRAMD1A-202ENST00000411896 NDFIP1Q9BT67 221 aa13.16□□□□□ -0.3
GRAMD1A-202ENST00000411896 C20orf202A1L168 122 aa13.16□□□□□ -0.3
GRAMD1A-202ENST00000411896 ZNF138P52744 262 aa13.16□□□□□ -0.3
GRAMD1A-202ENST00000411896 ARPC1AQ92747 370 aa13.16□□□□□ -0.3
GRAMD1A-202ENST00000411896 TMEM70Q9BUB7 260 aa13.16□□□□□ -0.3
GRAMD1A-202ENST00000411896 NPIPB5A8MRT5 1133 aa13.15□□□□□ -0.3
GRAMD1A-202ENST00000411896 IGHV3-23P01764 117 aa13.15□□□□□ -0.3
GRAMD1A-202ENST00000411896 MFAP4P55083 255 aa13.15□□□□□ -0.3
GRAMD1A-202ENST00000411896 COL5A1-AS1Q5SY13 56 aa13.15□□□□□ -0.3
GRAMD1A-202ENST00000411896 C8orf49Q96NF6 230 aa13.15□□□□□ -0.3
GRAMD1A-202ENST00000411896 IGLL1P15814 213 aa13.15□□□□□ -0.3
GRAMD1A-202ENST00000411896 SMIM15Q7Z3B0 74 aa13.15□□□□□ -0.3
GRAMD1A-202ENST00000411896 STPG4Q8N801 248 aa13.15□□□□□ -0.3
GRAMD1A-202ENST00000411896 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.14□□□□□ -0.31
GRAMD1A-202ENST00000411896 A0A1B0GUT8 65 aa13.14□□□□□ -0.31
GRAMD1A-202ENST00000411896 K7EQM0 130 aa13.14□□□□□ -0.31
GRAMD1A-202ENST00000411896 ZNF562Q6V9R5 426 aa13.14□□□□□ -0.31
GRAMD1A-202ENST00000411896 VMO1Q7Z5L0 202 aa13.14□□□□□ -0.31
GRAMD1A-202ENST00000411896 LAMTOR2Q9Y2Q5 125 aa13.14□□□□□ -0.31
GRAMD1A-202ENST00000411896 TRAV30A0A087WSZ9 112 aa13.14□□□□□ -0.31
GRAMD1A-202ENST00000411896 NCBP2LA6PVI3 153 aaKnown RBP13.14□□□□□ -0.31
GRAMD1A-202ENST00000411896 NDUFB8O95169 186 aa13.14□□□□□ -0.31
GRAMD1A-202ENST00000411896 TSPOP30536 169 aa13.14□□□□□ -0.31
GRAMD1A-202ENST00000411896 TMEM190Q8WZ59 177 aa13.14□□□□□ -0.31
GRAMD1A-202ENST00000411896 HSBP1L1C9JCN9 74 aa13.13□□□□□ -0.31
GRAMD1A-202ENST00000411896 TTC9CQ8N5M4 171 aa13.13□□□□□ -0.31
GRAMD1A-202ENST00000411896 ZNF48Q96MX3 618 aaPredicted RBP13.13□□□□□ -0.31
GRAMD1A-202ENST00000411896 RAXQ9Y2V3 346 aa13.13□□□□□ -0.31
GRAMD1A-202ENST00000411896 Q8N6K4 173 aa13.13□□□□□ -0.31
GRAMD1A-202ENST00000411896 NEU4Q8WWR8 484 aaPredicted RBP13.13□□□□□ -0.31
GRAMD1A-202ENST00000411896 SYS1-DBNDD2H3BUS1 97 aa13.12□□□□□ -0.31
GRAMD1A-202ENST00000411896 LEPROTL1O95214 131 aa13.12□□□□□ -0.31
GRAMD1A-202ENST00000411896 RIGQ13278 110 aa13.12□□□□□ -0.31
GRAMD1A-202ENST00000411896 TMUB1Q9BVT8 246 aa13.12□□□□□ -0.31
GRAMD1A-202ENST00000411896 C21orf62Q9NYP8 219 aa13.12□□□□□ -0.31
GRAMD1A-202ENST00000411896 MSRB2Q9Y3D2 182 aa13.12□□□□□ -0.31
GRAMD1A-202ENST00000411896 CCL25O15444 150 aa13.12□□□□□ -0.31
GRAMD1A-202ENST00000411896 PPBPP02775 128 aa13.12□□□□□ -0.31
GRAMD1A-202ENST00000411896 CSN3P07498 182 aa13.12□□□□□ -0.31
GRAMD1A-202ENST00000411896 ZFP36P26651 326 aaKnown RBP13.12□□□□□ -0.31
GRAMD1A-202ENST00000411896 PTTG1IPP53801 180 aa13.12□□□□□ -0.31
GRAMD1A-202ENST00000411896 KLRB1Q12918 225 aa13.12□□□□□ -0.31
GRAMD1A-202ENST00000411896 GATD1Q8NB37 220 aa13.12□□□□□ -0.31
GRAMD1A-202ENST00000411896 TPPP3Q9BW30 176 aa13.12□□□□□ -0.31
GRAMD1A-202ENST00000411896 C1RLQ9NZP8 487 aa13.12□□□□□ -0.31
GRAMD1A-202ENST00000411896 OR4C46A6NHA9 309 aa13.11□□□□□ -0.31
GRAMD1A-202ENST00000411896 CRXO43186 299 aaPredicted RBP13.11□□□□□ -0.31
GRAMD1A-202ENST00000411896 PDE6HQ13956 83 aa13.11□□□□□ -0.31
GRAMD1A-202ENST00000411896 HRNRQ86YZ3 2850 aaPredicted RBP13.11□□□□□ -0.31
GRAMD1A-202ENST00000411896 EGR2P11161 476 aaPredicted RBP13.11□□□□□ -0.31
GRAMD1A-202ENST00000411896 AAMDCQ9H7C9 122 aa13.11□□□□□ -0.31
GRAMD1A-202ENST00000411896 OR2T8A6NH00 312 aa13.1□□□□□ -0.31
GRAMD1A-202ENST00000411896 CCDC144NLQ6NUI1 221 aa13.1□□□□□ -0.31
GRAMD1A-202ENST00000411896 TP73-AS1Q9UF72 201 aa13.1□□□□□ -0.31
GRAMD1A-202ENST00000411896 MRPS16Q9Y3D3 137 aaKnown RBP13.1□□□□□ -0.31
GRAMD1A-202ENST00000411896 CSMD1Q96PZ7 3565 aa13.1□□□□□ -0.31
GRAMD1A-202ENST00000411896 IGKV2-40A0A087WW87 121 aaPredicted RBP13.1□□□□□ -0.31
GRAMD1A-202ENST00000411896 IGKV2D-40P01614 121 aaPredicted RBP13.1□□□□□ -0.31
GRAMD1A-202ENST00000411896 HINT1P49773 126 aaPredicted RBP13.1□□□□□ -0.31
GRAMD1A-202ENST00000411896 RNF151Q2KHN1 245 aa13.09□□□□□ -0.31
GRAMD1A-202ENST00000411896 TMSB15BA0A087X1C1 80 aa13.09□□□□□ -0.31
GRAMD1A-202ENST00000411896 A0A1W2PPR1 153 aa13.09□□□□□ -0.31
GRAMD1A-202ENST00000411896 EBI3Q14213 229 aa13.09□□□□□ -0.31
GRAMD1A-202ENST00000411896 C1orf122Q6ZSJ8 110 aa13.09□□□□□ -0.31
GRAMD1A-202ENST00000411896 S100A7AQ86SG5 101 aa13.09□□□□□ -0.31
GRAMD1A-202ENST00000411896 ORAOV1Q8WV07 137 aa13.09□□□□□ -0.31
GRAMD1A-202ENST00000411896 MCRIP2Q9BUT9 160 aaKnown RBP13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 140 ms