RNA–Protein interactions for RNA: ENST00000409952.3

LSM5-205, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-205ENST00000409952 ECM29Q5VYK3 1845 aa2.67□□□□□ -1.98
LSM5-205ENST00000409952 XIRP1Q702N8 1843 aaKnown RBP2.67□□□□□ -1.98
LSM5-205ENST00000409952 WDR90Q96KV7 1748 aa2.67□□□□□ -1.98
LSM5-205ENST00000409952 DISP2A7MBM2 1401 aa2.67□□□□□ -1.98
LSM5-205ENST00000409952 NYNRINQ9P2P1 1898 aaKnown RBP2.67□□□□□ -1.98
LSM5-205ENST00000409952 CUL7Q14999 1698 aa2.66□□□□□ -1.98
LSM5-205ENST00000409952 PLXNB1O43157 2135 aa2.66□□□□□ -1.98
LSM5-205ENST00000409952 ABCC8Q09428 1581 aa2.66□□□□□ -1.98
LSM5-205ENST00000409952 IGKV1D-42A0A075B6H8 117 aa2.66□□□□□ -1.98
LSM5-205ENST00000409952 MIF4GDA9UHW6 222 aaKnown RBP2.66□□□□□ -1.98
LSM5-205ENST00000409952 OR1I1O60431 355 aa2.66□□□□□ -1.98
LSM5-205ENST00000409952 RRAS2P62070 204 aaPredicted RBP2.66□□□□□ -1.98
LSM5-205ENST00000409952 MRPS36P82909 103 aaKnown RBP2.66□□□□□ -1.98
LSM5-205ENST00000409952 QRFPP83859 136 aa2.66□□□□□ -1.98
LSM5-205ENST00000409952 TMEM155Q4W5P6 130 aa2.66□□□□□ -1.98
LSM5-205ENST00000409952 HSD17B12Q53GQ0 312 aa2.66□□□□□ -1.98
LSM5-205ENST00000409952 Q8IYB0 196 aa2.66□□□□□ -1.98
LSM5-205ENST00000409952 NIT2Q9NQR4 276 aa2.66□□□□□ -1.98
LSM5-205ENST00000409952 MYH11P35749 1972 aa2.66□□□□□ -1.98
LSM5-205ENST00000409952 CDK13Q14004 1512 aaKnown RBP2.66□□□□□ -1.98
LSM5-205ENST00000409952 MED14O60244 1454 aa2.65□□□□□ -1.98
LSM5-205ENST00000409952 BCL9LQ86UU0 1499 aa2.65□□□□□ -1.98
LSM5-205ENST00000409952 PHLPP1O60346 1717 aa2.65□□□□□ -1.98
LSM5-205ENST00000409952 ARHGEF28Q8N1W1 1705 aaKnown RBP2.65□□□□□ -1.98
LSM5-205ENST00000409952 DOCK4Q8N1I0 1966 aa2.65□□□□□ -1.98
LSM5-205ENST00000409952 TRAV3A0A0B4J244 114 aa2.65□□□□□ -1.99
LSM5-205ENST00000409952 A0A1W2PNN7 141 aa2.65□□□□□ -1.99
LSM5-205ENST00000409952 UQCRQO14949 82 aa2.65□□□□□ -1.99
LSM5-205ENST00000409952 SMIM24O75264 130 aa2.65□□□□□ -1.99
LSM5-205ENST00000409952 IGLC6P0CF74 106 aa2.65□□□□□ -1.99
LSM5-205ENST00000409952 MGST1P10620 155 aaKnown RBP2.65□□□□□ -1.99
LSM5-205ENST00000409952 PEBP1P30086 187 aaKnown RBP2.65□□□□□ -1.99
LSM5-205ENST00000409952 RAB5CP51148 216 aa2.65□□□□□ -1.99
LSM5-205ENST00000409952 CDK5R1Q15078 307 aa2.65□□□□□ -1.99
LSM5-205ENST00000409952 LINC00471Q8N535 108 aa2.65□□□□□ -1.99
LSM5-205ENST00000409952 RETNLBQ9BQ08 111 aa2.65□□□□□ -1.99
LSM5-205ENST00000409952 CXCL16Q9H2A7 254 aa2.65□□□□□ -1.99
LSM5-205ENST00000409952 BANF2Q9H503 90 aa2.65□□□□□ -1.99
LSM5-205ENST00000409952 TNFSF18Q9UNG2 199 aa2.65□□□□□ -1.99
LSM5-205ENST00000409952 LY96Q9Y6Y9 160 aa2.65□□□□□ -1.99
LSM5-205ENST00000409952 BLMP54132 1417 aaPredicted RBP2.65□□□□□ -1.99
LSM5-205ENST00000409952 PRG4Q92954 1404 aaPredicted RBP2.65□□□□□ -1.99
LSM5-205ENST00000409952 ARID1AO14497 2285 aa2.65□□□□□ -1.99
LSM5-205ENST00000409952 GRIN2AQ12879 1464 aa2.65□□□□□ -1.99
LSM5-205ENST00000409952 ALKQ9UM73 1620 aa2.64□□□□□ -1.99
LSM5-205ENST00000409952 IGKV2-24A0A0C4DH68 120 aa2.64□□□□□ -1.99
LSM5-205ENST00000409952 OR2T8A6NH00 312 aa2.64□□□□□ -1.99
LSM5-205ENST00000409952 FNDC10F2Z333 226 aa2.64□□□□□ -1.99
LSM5-205ENST00000409952 K7ERU9 68 aa2.64□□□□□ -1.99
LSM5-205ENST00000409952 TCRAP04437 139 aa2.64□□□□□ -1.99
LSM5-205ENST00000409952 GPX1P07203 203 aa2.64□□□□□ -1.99
LSM5-205ENST00000409952 BAALC-AS2P0C853 105 aa2.64□□□□□ -1.99
LSM5-205ENST00000409952 LINC00694P0DN24 101 aa2.64□□□□□ -1.99
LSM5-205ENST00000409952 MAXP61244 160 aa2.64□□□□□ -1.99
LSM5-205ENST00000409952 HES1Q14469 280 aa2.64□□□□□ -1.99
LSM5-205ENST00000409952 WHAMMP3Q1A5X7 153 aa2.64□□□□□ -1.99
LSM5-205ENST00000409952 Q6ZTI0 123 aa2.64□□□□□ -1.99
LSM5-205ENST00000409952 CTAGE3PQ8IX95 158 aa2.64□□□□□ -1.99
LSM5-205ENST00000409952 ARL11Q969Q4 196 aa2.64□□□□□ -1.99
LSM5-205ENST00000409952 C20orf166-AS1Q96NR2 134 aa2.64□□□□□ -1.99
LSM5-205ENST00000409952 LINC00470Q9BZP3 86 aa2.64□□□□□ -1.99
LSM5-205ENST00000409952 C14orf132Q9NPU4 83 aa2.64□□□□□ -1.99
LSM5-205ENST00000409952 VWDEQ8N2E2 1590 aa2.64□□□□□ -1.99
LSM5-205ENST00000409952 SHANK2Q9UPX8 1470 aa2.64□□□□□ -1.99
LSM5-205ENST00000409952 SLIT2O94813 1529 aa2.63□□□□□ -1.99
LSM5-205ENST00000409952 KDM5BQ9UGL1 1544 aa2.63□□□□□ -1.99
LSM5-205ENST00000409952 SEC16AO15027 2179 aa2.63□□□□□ -1.99
LSM5-205ENST00000409952 TRPM6Q9BX84 2022 aa2.63□□□□□ -1.99
LSM5-205ENST00000409952 KIF26AQ9ULI4 1882 aaPredicted RBP2.63□□□□□ -1.99
LSM5-205ENST00000409952 RTEL1-TNFRSF6BF6WH68 1400 aa2.63□□□□□ -1.99
LSM5-205ENST00000409952 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.63□□□□□ -1.99
LSM5-205ENST00000409952 ZNF727A8MUV8 499 aa2.63□□□□□ -1.99
LSM5-205ENST00000409952 IBA57-AS1B1ANH7 110 aa2.63□□□□□ -1.99
LSM5-205ENST00000409952 C17orf112F2Z3M2 114 aa2.63□□□□□ -1.99
LSM5-205ENST00000409952 LYRM1O43325 122 aa2.63□□□□□ -1.99
LSM5-205ENST00000409952 NCR2O95944 276 aa2.63□□□□□ -1.99
LSM5-205ENST00000409952 SLC25A5P05141 298 aaKnown RBP2.63□□□□□ -1.99
LSM5-205ENST00000409952 TPT1P13693 172 aaKnown RBP2.63□□□□□ -1.99
LSM5-205ENST00000409952 LSM3P62310 102 aaKnown RBP2.63□□□□□ -1.99
LSM5-205ENST00000409952 SS18Q15532 418 aa2.63□□□□□ -1.99
LSM5-205ENST00000409952 KRTAP13-3Q3SY46 172 aa2.63□□□□□ -1.99
LSM5-205ENST00000409952 LCE3AQ5TA76 89 aa2.63□□□□□ -1.99
LSM5-205ENST00000409952 PTPRSQ13332 1948 aa2.63□□□□□ -1.99
LSM5-205ENST00000409952 UBR2Q8IWV8 1755 aa2.63□□□□□ -1.99
LSM5-205ENST00000409952 TCOF1Q13428 1488 aaKnown RBP2.63□□□□□ -1.99
LSM5-205ENST00000409952 BAHCC1Q9P281 2608 aa2.63□□□□□ -1.99
LSM5-205ENST00000409952 POLR1AO95602 1720 aaPredicted RBP2.62□□□□□ -1.99
LSM5-205ENST00000409952 TNRC18O15417 2968 aaPredicted RBP2.62□□□□□ -1.99
LSM5-205ENST00000409952 DNMBPQ6XZF7 1577 aa2.62□□□□□ -1.99
LSM5-205ENST00000409952 FAM135BQ49AJ0 1406 aa2.62□□□□□ -1.99
LSM5-205ENST00000409952 TRAV1-1A0A0B4J248 108 aa2.62□□□□□ -1.99
LSM5-205ENST00000409952 F8W036 122 aa2.62□□□□□ -1.99
LSM5-205ENST00000409952 GNG7O60262 68 aa2.62□□□□□ -1.99
LSM5-205ENST00000409952 PROSCO94903 275 aa2.62□□□□□ -1.99
LSM5-205ENST00000409952 HBDP02042 147 aa2.62□□□□□ -1.99
LSM5-205ENST00000409952 MIFP14174 115 aa2.62□□□□□ -1.99
LSM5-205ENST00000409952 AKR1D1P51857 326 aa2.62□□□□□ -1.99
LSM5-205ENST00000409952 ROMO1P60602 79 aa2.62□□□□□ -1.99
LSM5-205ENST00000409952 RPL26P61254 145 aaKnown RBP2.62□□□□□ -1.99
LSM5-205ENST00000409952 COPZ1P61923 177 aa2.62□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms