RNA–Protein interactions for RNA: ENST00000402813.7

CNGA1-202, Transcript of cyclic nucleotide gated channel alpha 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNGA1, Length 2,867 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1-202ENST00000402813 C10orf142B7Z368 130 aa4.28□□□□□ -1.73
CNGA1-202ENST00000402813 ZNF136P52737 540 aa4.28□□□□□ -1.73
CNGA1-202ENST00000402813 TAS2R45P59539 299 aa4.28□□□□□ -1.73
CNGA1-202ENST00000402813 C11orf87Q6NUJ2 197 aa4.28□□□□□ -1.73
CNGA1-202ENST00000402813 SMIM5Q71RC9 77 aa4.28□□□□□ -1.73
CNGA1-202ENST00000402813 SMRP1Q8NCR6 262 aa4.28□□□□□ -1.73
CNGA1-202ENST00000402813 ZNF222Q9UK12 451 aa4.28□□□□□ -1.73
CNGA1-202ENST00000402813 POLR2AP24928 1970 aaKnown RBP4.27□□□□□ -1.73
CNGA1-202ENST00000402813 COL4A3Q01955 1670 aa4.27□□□□□ -1.73
CNGA1-202ENST00000402813 TMEM235A6NFC5 223 aa4.27□□□□□ -1.73
CNGA1-202ENST00000402813 IGHV4-39P01824 125 aa4.27□□□□□ -1.73
CNGA1-202ENST00000402813 SYNJ2BPP57105 145 aa4.27□□□□□ -1.73
CNGA1-202ENST00000402813 CCL14Q16627 93 aa4.27□□□□□ -1.73
CNGA1-202ENST00000402813 BPIFA4PQ86YQ2 179 aa4.27□□□□□ -1.73
CNGA1-202ENST00000402813 H1FXQ92522 213 aaKnown RBP4.27□□□□□ -1.73
CNGA1-202ENST00000402813 RBMXL1Q96E39 390 aaKnown RBP4.27□□□□□ -1.73
CNGA1-202ENST00000402813 ADAMTS9Q9P2N4 1935 aa4.27□□□□□ -1.73
CNGA1-202ENST00000402813 SNCGO76070 127 aa4.27□□□□□ -1.73
CNGA1-202ENST00000402813 PGLYRP2Q96PD5 576 aa4.27□□□□□ -1.73
CNGA1-202ENST00000402813 TNRC6AQ8NDV7 1962 aaKnown RBP4.26□□□□□ -1.73
CNGA1-202ENST00000402813 J3QLW9 94 aa4.26□□□□□ -1.73
CNGA1-202ENST00000402813 SYNGR2O43760 224 aa4.26□□□□□ -1.73
CNGA1-202ENST00000402813 FUT5Q11128 374 aa4.26□□□□□ -1.73
CNGA1-202ENST00000402813 MUC21Q5SSG8 566 aa4.26□□□□□ -1.73
CNGA1-202ENST00000402813 LINC00173Q6ZV60 143 aa4.26□□□□□ -1.73
CNGA1-202ENST00000402813 LINC00596Q86U02 117 aa4.26□□□□□ -1.73
CNGA1-202ENST00000402813 MDP1Q86V88 176 aa4.26□□□□□ -1.73
CNGA1-202ENST00000402813 LYPD6Q86Y78 171 aa4.26□□□□□ -1.73
CNGA1-202ENST00000402813 URB1-AS1Q96HZ7 61 aa4.26□□□□□ -1.73
CNGA1-202ENST00000402813 C20orf78Q9BR46 151 aa4.26□□□□□ -1.73
CNGA1-202ENST00000402813 HDHD3Q9BSH5 251 aaPredicted RBP4.26□□□□□ -1.73
CNGA1-202ENST00000402813 PLEKHF2Q9H8W4 249 aa4.26□□□□□ -1.73
CNGA1-202ENST00000402813 MOB4Q9Y3A3 225 aa4.26□□□□□ -1.73
CNGA1-202ENST00000402813 ETV2O00321 342 aaPredicted RBP4.26□□□□□ -1.73
CNGA1-202ENST00000402813 COX7CP15954 63 aa4.26□□□□□ -1.73
CNGA1-202ENST00000402813 IL3RAP26951 378 aa4.26□□□□□ -1.73
CNGA1-202ENST00000402813 AQP1P29972 269 aa4.26□□□□□ -1.73
CNGA1-202ENST00000402813 CD52P31358 61 aa4.26□□□□□ -1.73
CNGA1-202ENST00000402813 MSMPQ1L6U9 139 aa4.26□□□□□ -1.73
CNGA1-202ENST00000402813 LGALS9CQ6DKI2 356 aa4.26□□□□□ -1.73
CNGA1-202ENST00000402813 ZNF286AQ9HBT8 521 aa4.26□□□□□ -1.73
CNGA1-202ENST00000402813 NXPH4O95158 308 aa4.25□□□□□ -1.73
CNGA1-202ENST00000402813 IGKV1-5P01602 117 aa4.25□□□□□ -1.73
CNGA1-202ENST00000402813 IGHV4-38-2P0DP08 117 aa4.25□□□□□ -1.73
CNGA1-202ENST00000402813 AQP3Q92482 292 aa4.25□□□□□ -1.73
CNGA1-202ENST00000402813 TMEM243Q9BU79 118 aa4.25□□□□□ -1.73
CNGA1-202ENST00000402813 SCN5AQ14524 2016 aa4.25□□□□□ -1.73
CNGA1-202ENST00000402813 IGHV1OR15-1A0A075B7D0 117 aa4.25□□□□□ -1.73
CNGA1-202ENST00000402813 TRAV1-1A0A0B4J248 108 aa4.25□□□□□ -1.73
CNGA1-202ENST00000402813 UMAD1C9J7I0 102 aa4.25□□□□□ -1.73
CNGA1-202ENST00000402813 CCL22O00626 93 aa4.25□□□□□ -1.73
CNGA1-202ENST00000402813 GYPBP06028 91 aa4.25□□□□□ -1.73
CNGA1-202ENST00000402813 ZNF883P0CG24 379 aa4.25□□□□□ -1.73
CNGA1-202ENST00000402813 HBBP68871 147 aa4.25□□□□□ -1.73
CNGA1-202ENST00000402813 ZNF117Q03924 483 aa4.25□□□□□ -1.73
CNGA1-202ENST00000402813 TMEM155Q4W5P6 130 aa4.25□□□□□ -1.73
CNGA1-202ENST00000402813 EBLN2Q6P2I7 272 aa4.25□□□□□ -1.73
CNGA1-202ENST00000402813 MARCH3Q86UD3 253 aa4.25□□□□□ -1.73
CNGA1-202ENST00000402813 OR10AG1Q8NH19 301 aa4.25□□□□□ -1.73
CNGA1-202ENST00000402813 SLC25A22Q9H936 323 aa4.25□□□□□ -1.73
CNGA1-202ENST00000402813 SPCS1Q9Y6A9 102 aa4.25□□□□□ -1.73
CNGA1-202ENST00000402813 A0A1W2PPM0 123 aa4.24□□□□□ -1.73
CNGA1-202ENST00000402813 RBAKDNA6NC62 111 aa4.24□□□□□ -1.73
CNGA1-202ENST00000402813 TMEM256-PLSCR3K7ERE1 68 aa4.24□□□□□ -1.73
CNGA1-202ENST00000402813 COX7A2P2O60397 106 aa4.24□□□□□ -1.73
CNGA1-202ENST00000402813 CD3DP04234 171 aa4.24□□□□□ -1.73
CNGA1-202ENST00000402813 CXCL1P09341 107 aa4.24□□□□□ -1.73
CNGA1-202ENST00000402813 IGHV3-43DP0DP04 118 aa4.24□□□□□ -1.73
CNGA1-202ENST00000402813 SPATA45Q537H7 98 aa4.24□□□□□ -1.73
CNGA1-202ENST00000402813 LINC01555Q8NAE3 123 aa4.24□□□□□ -1.73
CNGA1-202ENST00000402813 OR8A1Q8NGG7 326 aa4.24□□□□□ -1.73
CNGA1-202ENST00000402813 SLC39A9Q9NUM3 307 aa4.24□□□□□ -1.73
CNGA1-202ENST00000402813 MYO10Q9HD67 2058 aa4.24□□□□□ -1.73
CNGA1-202ENST00000402813 PIKFYVEQ9Y2I7 2098 aa4.24□□□□□ -1.73
CNGA1-202ENST00000402813 GRIFINA4D1Z8 144 aa4.24□□□□□ -1.73
CNGA1-202ENST00000402813 K7EQG2 157 aa4.24□□□□□ -1.73
CNGA1-202ENST00000402813 ZNF253O75346 499 aa4.24□□□□□ -1.73
CNGA1-202ENST00000402813 VDAC1P21796 283 aa4.24□□□□□ -1.73
CNGA1-202ENST00000402813 IGHV1-2P23083 117 aa4.24□□□□□ -1.73
CNGA1-202ENST00000402813 ERVK-16P61578 105 aa4.24□□□□□ -1.73
CNGA1-202ENST00000402813 SNRPD3P62318 126 aaKnown RBP4.24□□□□□ -1.73
CNGA1-202ENST00000402813 FHL1Q13642 323 aa4.24□□□□□ -1.73
CNGA1-202ENST00000402813 RBMY1FQ15415 496 aaKnown RBP4.24□□□□□ -1.73
CNGA1-202ENST00000402813 OR5H2Q8NGV7 314 aa4.24□□□□□ -1.73
CNGA1-202ENST00000402813 AMELYQ99218 206 aa4.24□□□□□ -1.73
CNGA1-202ENST00000402813 PYGO2Q9BRQ0 406 aa4.24□□□□□ -1.73
CNGA1-202ENST00000402813 PLA2G12AQ9BZM1 189 aa4.24□□□□□ -1.73
CNGA1-202ENST00000402813 LINC00588Q9Y4M8 146 aa4.24□□□□□ -1.73
CNGA1-202ENST00000402813 MDC1Q14676 2089 aaKnown RBP4.24□□□□□ -1.73
CNGA1-202ENST00000402813 TRBV7-7A0A0K0K1E9 115 aa4.24□□□□□ -1.73
CNGA1-202ENST00000402813 SSSCA1O60232 199 aa4.24□□□□□ -1.73
CNGA1-202ENST00000402813 CISD3P0C7P0 127 aa4.24□□□□□ -1.73
CNGA1-202ENST00000402813 MRPS36P82909 103 aaKnown RBP4.24□□□□□ -1.73
CNGA1-202ENST00000402813 ELOBQ15370 118 aa4.24□□□□□ -1.73
CNGA1-202ENST00000402813 C17orf58Q2M2W7 97 aa4.24□□□□□ -1.73
CNGA1-202ENST00000402813 XP32Q5T750 250 aa4.24□□□□□ -1.73
CNGA1-202ENST00000402813 ZNF584Q8IVC4 421 aa4.24□□□□□ -1.73
CNGA1-202ENST00000402813 NKAPP1Q8N9T2 125 aa4.24□□□□□ -1.73
CNGA1-202ENST00000402813 PRELID3AQ96N28 172 aa4.24□□□□□ -1.73
CNGA1-202ENST00000402813 TIMM17AQ99595 171 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 86.7 ms