RNA–Protein interactions for RNA: ENST00000394611.6

RTN4-206, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,161 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-206ENST00000394611 MRPL16Q9NX20 251 aaKnown RBP7.13□□□□□ -1.27
RTN4-206ENST00000394611 CYSLTR1Q9Y271 337 aa7.13□□□□□ -1.27
RTN4-206ENST00000394611 M0R381 172 aa7.13□□□□□ -1.27
RTN4-206ENST00000394611 YPEL1O60688 119 aa7.13□□□□□ -1.27
RTN4-206ENST00000394611 ESDP10768 282 aa7.13□□□□□ -1.27
RTN4-206ENST00000394611 VDAC2P45880 294 aaPredicted RBP7.13□□□□□ -1.27
RTN4-206ENST00000394611 LOXL1Q08397 574 aaPredicted RBP7.13□□□□□ -1.27
RTN4-206ENST00000394611 COLCA1Q6ZS62 124 aa7.13□□□□□ -1.27
RTN4-206ENST00000394611 ZNF714Q96N38 554 aa7.13□□□□□ -1.27
RTN4-206ENST00000394611 YPEL2Q96QA6 119 aa7.13□□□□□ -1.27
RTN4-206ENST00000394611 VKORC1Q9BQB6 163 aa7.13□□□□□ -1.27
RTN4-206ENST00000394611 RAXQ9Y2V3 346 aa7.13□□□□□ -1.27
RTN4-206ENST00000394611 E7EUB6 86 aa7.12□□□□□ -1.27
RTN4-206ENST00000394611 PROP1O75360 226 aa7.12□□□□□ -1.27
RTN4-206ENST00000394611 PAX2Q02962 417 aa7.12□□□□□ -1.27
RTN4-206ENST00000394611 SPANXN1Q5VSR9 72 aa7.12□□□□□ -1.27
RTN4-206ENST00000394611 KBTBD11-OT1A0A1B0GTJ5 212 aa7.12□□□□□ -1.27
RTN4-206ENST00000394611 UPK2O00526 184 aa7.12□□□□□ -1.27
RTN4-206ENST00000394611 LY6HO94772 140 aa7.12□□□□□ -1.27
RTN4-206ENST00000394611 ATP5G2Q06055 141 aa7.12□□□□□ -1.27
RTN4-206ENST00000394611 LINC00322Q6ZN03 302 aaPredicted RBP7.12□□□□□ -1.27
RTN4-206ENST00000394611 RPRMLQ8N4K4 120 aa7.12□□□□□ -1.27
RTN4-206ENST00000394611 ZZEF1O43149 2961 aa7.12□□□□□ -1.27
RTN4-206ENST00000394611 ANKRD11Q6UB99 2663 aaPredicted RBP7.12□□□□□ -1.27
RTN4-206ENST00000394611 KIR2DS2P43631 304 aa7.12□□□□□ -1.27
RTN4-206ENST00000394611 LYZL1Q6UWQ5 148 aa7.12□□□□□ -1.27
RTN4-206ENST00000394611 ZNF329Q86UD4 541 aa7.12□□□□□ -1.27
RTN4-206ENST00000394611 RAB1CQ92928 201 aa7.12□□□□□ -1.27
RTN4-206ENST00000394611 IFI27L1Q96BM0 104 aa7.12□□□□□ -1.27
RTN4-206ENST00000394611 SIGMAR1Q99720 223 aa7.12□□□□□ -1.27
RTN4-206ENST00000394611 MRPL36Q9P0J6 103 aaKnown RBP7.12□□□□□ -1.27
RTN4-206ENST00000394611 CENPEQ02224 2701 aa7.12□□□□□ -1.27
RTN4-206ENST00000394611 AGRNO00468 2067 aa7.12□□□□□ -1.27
RTN4-206ENST00000394611 ZC2HC1BQ5TFG8 222 aa7.12□□□□□ -1.27
RTN4-206ENST00000394611 FDCSPQ8NFU4 85 aa7.12□□□□□ -1.27
RTN4-206ENST00000394611 C8orf49Q96NF6 230 aa7.12□□□□□ -1.27
RTN4-206ENST00000394611 CLUHP3Q96NS8 147 aa7.12□□□□□ -1.27
RTN4-206ENST00000394611 IGKV3-20P01619 116 aa7.11□□□□□ -1.27
RTN4-206ENST00000394611 GATA1P15976 413 aaPredicted RBP7.11□□□□□ -1.27
RTN4-206ENST00000394611 GLMPQ8WWB7 406 aa7.11□□□□□ -1.27
RTN4-206ENST00000394611 ZNF479Q96JC4 524 aa7.11□□□□□ -1.27
RTN4-206ENST00000394611 A0A1B0GV72 72 aa7.11□□□□□ -1.27
RTN4-206ENST00000394611 CKS1BP61024 79 aa7.11□□□□□ -1.27
RTN4-206ENST00000394611 C1orf229Q6ZS94 237 aaPredicted RBP7.11□□□□□ -1.27
RTN4-206ENST00000394611 C3orf56Q8N813 242 aa7.11□□□□□ -1.27
RTN4-206ENST00000394611 NDFIP1Q9BT67 221 aa7.11□□□□□ -1.27
RTN4-206ENST00000394611 SLC25A2Q9BXI2 301 aa7.11□□□□□ -1.27
RTN4-206ENST00000394611 TRAV26-2A0A0B4J265 109 aa7.11□□□□□ -1.27
RTN4-206ENST00000394611 CD5LO43866 347 aa7.11□□□□□ -1.27
RTN4-206ENST00000394611 PRTN3P24158 256 aa7.11□□□□□ -1.27
RTN4-206ENST00000394611 RHOGP84095 191 aa7.11□□□□□ -1.27
RTN4-206ENST00000394611 PRCDQ00LT1 54 aa7.11□□□□□ -1.27
RTN4-206ENST00000394611 FOXE3Q13461 319 aa7.11□□□□□ -1.27
RTN4-206ENST00000394611 USP9XQ93008 2570 aaPredicted RBP7.1□□□□□ -1.27
RTN4-206ENST00000394611 VSTM5A8MXK1 200 aa7.1□□□□□ -1.27
RTN4-206ENST00000394611 RNASE2P10153 161 aaKnown RBP7.1□□□□□ -1.27
RTN4-206ENST00000394611 Q6ZS49 121 aa7.1□□□□□ -1.27
RTN4-206ENST00000394611 DPF1Q92782 380 aa7.1□□□□□ -1.27
RTN4-206ENST00000394611 LINC00527Q9UJ94 153 aa7.1□□□□□ -1.27
RTN4-206ENST00000394611 IQCF6A8MYZ5 107 aa7.1□□□□□ -1.27
RTN4-206ENST00000394611 WT1-ASQ06250 92 aa7.1□□□□□ -1.27
RTN4-206ENST00000394611 OR4C13Q8NGP0 309 aa7.1□□□□□ -1.27
RTN4-206ENST00000394611 MYOZ3Q8TDC0 251 aa7.1□□□□□ -1.27
RTN4-206ENST00000394611 PRSS2P07478 247 aa7.1□□□□□ -1.27
RTN4-206ENST00000394611 ORMDL3Q8N138 153 aa7.1□□□□□ -1.27
RTN4-206ENST00000394611 TRAV9-1A0A075B6T8 112 aa7.09□□□□□ -1.27
RTN4-206ENST00000394611 IGHV3OR16-10A0A075B7F0 116 aa7.09□□□□□ -1.27
RTN4-206ENST00000394611 J3QW42 95 aa7.09□□□□□ -1.27
RTN4-206ENST00000394611 CTRLP40313 264 aa7.09□□□□□ -1.27
RTN4-206ENST00000394611 NPC2P61916 151 aa7.09□□□□□ -1.27
RTN4-206ENST00000394611 WFDC2Q14508 124 aa7.09□□□□□ -1.27
RTN4-206ENST00000394611 FAM74A4Q5TZK3 123 aa7.09□□□□□ -1.27
RTN4-206ENST00000394611 DEFB125Q8N687 156 aa7.09□□□□□ -1.27
RTN4-206ENST00000394611 GTSF1Q8WW33 167 aa7.09□□□□□ -1.27
RTN4-206ENST00000394611 ZNF503Q96F45 646 aa7.09□□□□□ -1.27
RTN4-206ENST00000394611 LINC00470Q9BZP3 86 aa7.09□□□□□ -1.27
RTN4-206ENST00000394611 TMEM133Q9H2Q1 129 aa7.09□□□□□ -1.27
RTN4-206ENST00000394611 TCRBV4S1A1TA0A5B7 111 aa7.09□□□□□ -1.27
RTN4-206ENST00000394611 C2orf70A6NJV1 201 aa7.09□□□□□ -1.27
RTN4-206ENST00000394611 DKK4Q9UBT3 224 aa7.09□□□□□ -1.27
RTN4-206ENST00000394611 TRAV40A0A0B4J280 105 aa7.09□□□□□ -1.27
RTN4-206ENST00000394611 IGHV1-18A0A0C4DH31 117 aa7.09□□□□□ -1.27
RTN4-206ENST00000394611 SMIM27A0A1W2PRY6 76 aa7.09□□□□□ -1.27
RTN4-206ENST00000394611 RAB9AP51151 201 aa7.09□□□□□ -1.27
RTN4-206ENST00000394611 FAM120AOSQ5T036 256 aa7.09□□□□□ -1.27
RTN4-206ENST00000394611 PET117Q6UWS5 81 aa7.09□□□□□ -1.27
RTN4-206ENST00000394611 Q6ZT83 130 aa7.09□□□□□ -1.27
RTN4-206ENST00000394611 C8orf46Q8TAG6 207 aa7.09□□□□□ -1.27
RTN4-206ENST00000394611 MAP1LC3AQ9H492 121 aa7.09□□□□□ -1.27
RTN4-206ENST00000394611 MRPL27Q9P0M9 148 aaKnown RBP7.09□□□□□ -1.27
RTN4-206ENST00000394611 PSG8Q9UQ74 426 aa7.09□□□□□ -1.27
RTN4-206ENST00000394611 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.09□□□□□ -1.28
RTN4-206ENST00000394611 LTAP01374 205 aa7.09□□□□□ -1.28
RTN4-206ENST00000394611 HLA-DMBP28068 263 aa7.09□□□□□ -1.28
RTN4-206ENST00000394611 CEACAM3P40198 252 aa7.09□□□□□ -1.28
RTN4-206ENST00000394611 MSRB1Q9NZV6 116 aa7.09□□□□□ -1.28
RTN4-206ENST00000394611 CD300EQ496F6 205 aaPredicted RBP7.08□□□□□ -1.28
RTN4-206ENST00000394611 FAM71F2Q6NXP2 309 aa7.08□□□□□ -1.28
RTN4-206ENST00000394611 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.08□□□□□ -1.28
RTN4-206ENST00000394611 Q8N976 141 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms