RNA–Protein interactions for RNA: ENST00000351948.8

SMC6-201, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,173 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-201ENST00000351948 IGHV3-53P01767 116 aa10.93□□□□□ -0.66
SMC6-201ENST00000351948 SMIM6P0DI80 62 aa10.93□□□□□ -0.66
SMC6-201ENST00000351948 SAMD13Q5VXD3 122 aa10.93□□□□□ -0.66
SMC6-201ENST00000351948 TMEM160Q9NX00 188 aa10.93□□□□□ -0.66
SMC6-201ENST00000351948 HAPLN4Q86UW8 402 aa10.93□□□□□ -0.66
SMC6-201ENST00000351948 ARL6IP6Q8N6S5 226 aa10.93□□□□□ -0.66
SMC6-201ENST00000351948 OR11H1Q8NG94 326 aa10.93□□□□□ -0.66
SMC6-201ENST00000351948 PMCHL2Q9BQD1 86 aa10.93□□□□□ -0.66
SMC6-201ENST00000351948 LYL1P12980 280 aa10.93□□□□□ -0.66
SMC6-201ENST00000351948 FAM209BQ5JX69 171 aa10.93□□□□□ -0.66
SMC6-201ENST00000351948 ORMDL3Q8N138 153 aa10.93□□□□□ -0.66
SMC6-201ENST00000351948 LINC01551Q86U37 167 aa10.92□□□□□ -0.66
SMC6-201ENST00000351948 MIEN1Q9BRT3 115 aa10.92□□□□□ -0.66
SMC6-201ENST00000351948 GEMIN7Q9H840 131 aaKnown RBP10.92□□□□□ -0.66
SMC6-201ENST00000351948 BLCAPP62952 87 aa10.92□□□□□ -0.66
SMC6-201ENST00000351948 SPATA45Q537H7 98 aa10.92□□□□□ -0.66
SMC6-201ENST00000351948 OSTCQ9NRP0 149 aa10.92□□□□□ -0.66
SMC6-201ENST00000351948 HTTP42858 3142 aa10.92□□□□□ -0.66
SMC6-201ENST00000351948 EPG5Q9HCE0 2579 aa10.92□□□□□ -0.66
SMC6-201ENST00000351948 H7C1H1 209 aa10.92□□□□□ -0.66
SMC6-201ENST00000351948 NCR2O95944 276 aa10.92□□□□□ -0.66
SMC6-201ENST00000351948 SSBP2P81877 361 aaPredicted RBP10.92□□□□□ -0.66
SMC6-201ENST00000351948 LYPD6Q86Y78 171 aa10.92□□□□□ -0.66
SMC6-201ENST00000351948 SHANK2-AS3Q9BTD1 123 aa10.92□□□□□ -0.66
SMC6-201ENST00000351948 ZNF25P17030 456 aaPredicted RBP10.92□□□□□ -0.66
SMC6-201ENST00000351948 ZNF138P52744 262 aa10.92□□□□□ -0.66
SMC6-201ENST00000351948 SUMO2P61956 95 aaKnown RBP10.92□□□□□ -0.66
SMC6-201ENST00000351948 TMEM170BQ5T4T1 132 aa10.92□□□□□ -0.66
SMC6-201ENST00000351948 C9orf139Q6ZV77 190 aa10.92□□□□□ -0.66
SMC6-201ENST00000351948 C10orf105Q8TEF2 133 aa10.92□□□□□ -0.66
SMC6-201ENST00000351948 KLF2Q9Y5W3 355 aaPredicted RBP10.92□□□□□ -0.66
SMC6-201ENST00000351948 CENPVL3A0A0U1RRI6 287 aa10.91□□□□□ -0.66
SMC6-201ENST00000351948 OR11H12B2RN74 326 aa10.91□□□□□ -0.66
SMC6-201ENST00000351948 FOLR2P14207 255 aa10.91□□□□□ -0.66
SMC6-201ENST00000351948 DEFB136Q30KP8 78 aa10.91□□□□□ -0.66
SMC6-201ENST00000351948 TRGV4A0A0C4DH28 118 aa10.91□□□□□ -0.66
SMC6-201ENST00000351948 ADMP35318 185 aa10.91□□□□□ -0.66
SMC6-201ENST00000351948 LRRK2Q5S007 2527 aa10.91□□□□□ -0.66
SMC6-201ENST00000351948 TRAV1-1A0A0B4J248 108 aa10.91□□□□□ -0.66
SMC6-201ENST00000351948 IGKV3D-20A0A0C4DH25 116 aa10.91□□□□□ -0.66
SMC6-201ENST00000351948 SNAI2O43623 268 aa10.91□□□□□ -0.66
SMC6-201ENST00000351948 JKAMPQ9P055 326 aa10.91□□□□□ -0.66
SMC6-201ENST00000351948 ZNF462Q96JM2 2506 aa10.91□□□□□ -0.66
SMC6-201ENST00000351948 J3QLI3 93 aa10.91□□□□□ -0.66
SMC6-201ENST00000351948 GCSHP23434 173 aa10.91□□□□□ -0.66
SMC6-201ENST00000351948 CDX1P47902 265 aaPredicted RBP10.91□□□□□ -0.66
SMC6-201ENST00000351948 A0A087WWC5 75 aa10.9□□□□□ -0.66
SMC6-201ENST00000351948 ASPHD1Q5U4P2 390 aa10.9□□□□□ -0.66
SMC6-201ENST00000351948 ABCA12Q86UK0 2595 aa10.9□□□□□ -0.66
SMC6-201ENST00000351948 OR10J3Q5JRS4 329 aa10.9□□□□□ -0.66
SMC6-201ENST00000351948 Q6AWC8 147 aa10.9□□□□□ -0.66
SMC6-201ENST00000351948 RNF114Q9Y508 228 aa10.9□□□□□ -0.66
SMC6-201ENST00000351948 DSCAMO60469 2012 aa10.9□□□□□ -0.66
SMC6-201ENST00000351948 SERF1AO75920 110 aa10.9□□□□□ -0.66
SMC6-201ENST00000351948 SMAGPQ0VAQ4 97 aa10.9□□□□□ -0.66
SMC6-201ENST00000351948 SCGB3A1Q96QR1 104 aa10.9□□□□□ -0.66
SMC6-201ENST00000351948 ZMAT5Q9UDW3 170 aaKnown RBP10.9□□□□□ -0.66
SMC6-201ENST00000351948 C5orf52A6NGY3 159 aa10.89□□□□□ -0.67
SMC6-201ENST00000351948 PMCHL1Q16048 86 aa10.89□□□□□ -0.67
SMC6-201ENST00000351948 FNDC4Q9H6D8 234 aaPredicted RBP10.89□□□□□ -0.67
SMC6-201ENST00000351948 NRN1Q9NPD7 142 aa10.89□□□□□ -0.67
SMC6-201ENST00000351948 TRGV1A0A0A0MS02 117 aa10.89□□□□□ -0.67
SMC6-201ENST00000351948 TRAV8-6A0A0B4J262 113 aa10.89□□□□□ -0.67
SMC6-201ENST00000351948 C9JQL5 133 aa10.89□□□□□ -0.67
SMC6-201ENST00000351948 CXCL1P09341 107 aa10.89□□□□□ -0.67
SMC6-201ENST00000351948 C12orf54Q6X4T0 127 aa10.89□□□□□ -0.67
SMC6-201ENST00000351948 TSKUQ8WUA8 353 aa10.89□□□□□ -0.67
SMC6-201ENST00000351948 SRSF8Q9BRL6 282 aaKnown RBP10.89□□□□□ -0.67
SMC6-201ENST00000351948 XCL2Q9UBD3 114 aa10.89□□□□□ -0.67
SMC6-201ENST00000351948 CHD7Q9P2D1 2997 aa10.89□□□□□ -0.67
SMC6-201ENST00000351948 PRRC2AP48634 2157 aaKnown RBP10.89□□□□□ -0.67
SMC6-201ENST00000351948 SH2D1AO60880 128 aa10.89□□□□□ -0.67
SMC6-201ENST00000351948 SNCGO76070 127 aa10.89□□□□□ -0.67
SMC6-201ENST00000351948 LYZL1Q6UWQ5 148 aa10.89□□□□□ -0.67
SMC6-201ENST00000351948 ZNF414Q96IQ9 312 aa10.89□□□□□ -0.67
SMC6-201ENST00000351948 FBLL1A6NHQ2 334 aaKnown RBP10.88□□□□□ -0.67
SMC6-201ENST00000351948 GUSBP1Q15486 140 aa10.88□□□□□ -0.67
SMC6-201ENST00000351948 Q6ZSR3 168 aa10.88□□□□□ -0.67
SMC6-201ENST00000351948 ST6GALNAC6Q969X2 333 aa10.88□□□□□ -0.67
SMC6-201ENST00000351948 DPH3Q96FX2 82 aa10.88□□□□□ -0.67
SMC6-201ENST00000351948 FOXC2Q99958 501 aa10.88□□□□□ -0.67
SMC6-201ENST00000351948 HINT1P49773 126 aaPredicted RBP10.88□□□□□ -0.67
SMC6-201ENST00000351948 DAZAP2Q15038 168 aaPredicted RBP10.88□□□□□ -0.67
SMC6-201ENST00000351948 PSG3Q16557 428 aa10.88□□□□□ -0.67
SMC6-201ENST00000351948 FBXL19-AS1Q494R0 122 aa10.88□□□□□ -0.67
SMC6-201ENST00000351948 TCTEX1D4Q5JR98 221 aa10.88□□□□□ -0.67
SMC6-201ENST00000351948 M0R143 59 aa10.88□□□□□ -0.67
SMC6-201ENST00000351948 TOMM7Q9P0U1 55 aa10.88□□□□□ -0.67
SMC6-201ENST00000351948 LINC01619G3V211 115 aa10.88□□□□□ -0.67
SMC6-201ENST00000351948 RCHY1Q96PM5 261 aa10.88□□□□□ -0.67
SMC6-201ENST00000351948 SPINK13Q1W4C9 94 aa10.88□□□□□ -0.67
SMC6-201ENST00000351948 DMRTA1Q5VZB9 504 aa10.87□□□□□ -0.67
SMC6-201ENST00000351948 OR11H6Q8NGC7 330 aa10.87□□□□□ -0.67
SMC6-201ENST00000351948 VPREB3Q9UKI3 123 aa10.87□□□□□ -0.67
SMC6-201ENST00000351948 IGLC7A0M8Q6 106 aa10.87□□□□□ -0.67
SMC6-201ENST00000351948 MEIG1Q5JSS6 88 aa10.87□□□□□ -0.67
SMC6-201ENST00000351948 OR4C5Q8NGB2 326 aa10.87□□□□□ -0.67
SMC6-201ENST00000351948 ZNF726P1Q15940 193 aa10.87□□□□□ -0.67
SMC6-201ENST00000351948 RPLP1P05386 114 aaKnown RBP10.86□□□□□ -0.67
SMC6-201ENST00000351948 LGALS3P17931 250 aaKnown RBP10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 112.1 ms