RNA–Protein interactions for RNA: ENST00000308639.13

RELA-201, Transcript of RELA proto-oncogene, NF-kB subunit, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RELA, Length 2,681 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RELA-201ENST00000308639 RBPJQ06330 500 aa16.45■□□□□ 0.22
RELA-201ENST00000308639 COL6A6A6NMZ7 2263 aa16.45■□□□□ 0.22
RELA-201ENST00000308639 OCIAD2Q56VL3 154 aa16.44■□□□□ 0.22
RELA-201ENST00000308639 SMIM12Q96EX1 92 aa16.44■□□□□ 0.22
RELA-201ENST00000308639 CHEK1O14757 476 aa16.44■□□□□ 0.22
RELA-201ENST00000308639 CIDEAO60543 219 aa16.44■□□□□ 0.22
RELA-201ENST00000308639 IGHV3-23P01764 117 aa16.44■□□□□ 0.22
RELA-201ENST00000308639 VAMP3Q15836 100 aa16.44■□□□□ 0.22
RELA-201ENST00000308639 TPPP3Q9BW30 176 aa16.44■□□□□ 0.22
RELA-201ENST00000308639 CST9LQ9H4G1 147 aa16.44■□□□□ 0.22
RELA-201ENST00000308639 H0Y8G0 127 aa16.43■□□□□ 0.22
RELA-201ENST00000308639 OVOL3O00110 214 aa16.43■□□□□ 0.22
RELA-201ENST00000308639 HES1Q14469 280 aa16.43■□□□□ 0.22
RELA-201ENST00000308639 TRBV19A0A075B6N1 114 aa16.43■□□□□ 0.22
RELA-201ENST00000308639 TMEM238C9JI98 176 aa16.43■□□□□ 0.22
RELA-201ENST00000308639 FCGR2BP31994 310 aaPredicted RBP16.43■□□□□ 0.22
RELA-201ENST00000308639 VKORC1Q9BQB6 163 aa16.43■□□□□ 0.22
RELA-201ENST00000308639 ZFHX3Q15911 3703 aa16.43■□□□□ 0.22
RELA-201ENST00000308639 ARMS2P0C7Q2 107 aa16.42■□□□□ 0.22
RELA-201ENST00000308639 APOHP02749 345 aaPredicted RBP16.42■□□□□ 0.22
RELA-201ENST00000308639 NBL1P41271 181 aa16.42■□□□□ 0.22
RELA-201ENST00000308639 CT83Q5H943 113 aa16.42■□□□□ 0.22
RELA-201ENST00000308639 ZNF491Q8N8L2 437 aa16.42■□□□□ 0.22
RELA-201ENST00000308639 SHANK2-AS3Q9BTD1 123 aa16.42■□□□□ 0.22
RELA-201ENST00000308639 SCNM1Q9BWG6 230 aa16.42■□□□□ 0.22
RELA-201ENST00000308639 TMEM14CQ9P0S9 112 aa16.42■□□□□ 0.22
RELA-201ENST00000308639 TRAV9-2A0A087WT02 112 aa16.42■□□□□ 0.22
RELA-201ENST00000308639 LOC102724200A0A096LPH7 203 aaPredicted RBP16.42■□□□□ 0.22
RELA-201ENST00000308639 NPIPB6E9PJ23 425 aa16.42■□□□□ 0.22
RELA-201ENST00000308639 SIGLEC15Q6ZMC9 328 aa16.42■□□□□ 0.22
RELA-201ENST00000308639 SPTBN1Q01082 2364 aaKnown RBP16.41■□□□□ 0.22
RELA-201ENST00000308639 CRIP1P50238 77 aa16.41■□□□□ 0.22
RELA-201ENST00000308639 SVIPQ8NHG7 77 aa16.41■□□□□ 0.22
RELA-201ENST00000308639 RNF125Q96EQ8 232 aa16.41■□□□□ 0.22
RELA-201ENST00000308639 C8orf49Q96NF6 230 aa16.41■□□□□ 0.22
RELA-201ENST00000308639 TMEM70Q9BUB7 260 aa16.41■□□□□ 0.22
RELA-201ENST00000308639 AKAP6Q13023 2319 aa16.41■□□□□ 0.22
RELA-201ENST00000308639 hDV102S1A0JD36 115 aa16.41■□□□□ 0.22
RELA-201ENST00000308639 HLA-DRB1P01911 266 aa16.41■□□□□ 0.22
RELA-201ENST00000308639 LIPFP07098 398 aa16.41■□□□□ 0.22
RELA-201ENST00000308639 HTR1DP28221 377 aa16.41■□□□□ 0.22
RELA-201ENST00000308639 PAX2Q02962 417 aa16.41■□□□□ 0.22
RELA-201ENST00000308639 PMCHL2Q9BQD1 86 aa16.41■□□□□ 0.22
RELA-201ENST00000308639 IGHV3OR16-8A0A075B7F1 116 aa16.4■□□□□ 0.22
RELA-201ENST00000308639 H3BRN7 92 aa16.4■□□□□ 0.22
RELA-201ENST00000308639 NBR2O15453 112 aa16.4■□□□□ 0.22
RELA-201ENST00000308639 BPIFA4PQ86YQ2 179 aa16.4■□□□□ 0.22
RELA-201ENST00000308639 TMSB15BA0A087X1C1 80 aa16.4■□□□□ 0.22
RELA-201ENST00000308639 MUC21A0A0G2JKD1 596 aa16.4■□□□□ 0.22
RELA-201ENST00000308639 MUC21A0A140T8X8 626 aa16.4■□□□□ 0.22
RELA-201ENST00000308639 HSBP1L1C9JCN9 74 aa16.4■□□□□ 0.22
RELA-201ENST00000308639 RPS20P60866 119 aaKnown RBP16.4■□□□□ 0.22
RELA-201ENST00000308639 RHOGP84095 191 aa16.4■□□□□ 0.22
RELA-201ENST00000308639 MUC21Q5SSG8 566 aa16.4■□□□□ 0.22
RELA-201ENST00000308639 CFHR4Q92496 578 aa16.4■□□□□ 0.22
RELA-201ENST00000308639 HOXB4P17483 251 aaPredicted RBP16.39■□□□□ 0.21
RELA-201ENST00000308639 OR4F17Q8NGA8 305 aa16.39■□□□□ 0.21
RELA-201ENST00000308639 OR4C46A6NHA9 309 aa16.39■□□□□ 0.21
RELA-201ENST00000308639 K7ENP7 123 aa16.39■□□□□ 0.21
RELA-201ENST00000308639 NDPQ00604 133 aa16.39■□□□□ 0.21
RELA-201ENST00000308639 DYNAPQ8N1N2 210 aa16.39■□□□□ 0.21
RELA-201ENST00000308639 GFRA4Q9GZZ7 299 aa16.39■□□□□ 0.21
RELA-201ENST00000308639 PSG8Q9UQ74 426 aa16.39■□□□□ 0.21
RELA-201ENST00000308639 LEPROTL1O95214 131 aa16.38■□□□□ 0.21
RELA-201ENST00000308639 DPM3Q9P2X0 92 aa16.38■□□□□ 0.21
RELA-201ENST00000308639 ZNF414Q96IQ9 312 aa16.38■□□□□ 0.21
RELA-201ENST00000308639 TMUB1Q9BVT8 246 aa16.38■□□□□ 0.21
RELA-201ENST00000308639 CCL21O00585 134 aa16.37■□□□□ 0.21
RELA-201ENST00000308639 MRPS12O15235 138 aaKnown RBP16.37■□□□□ 0.21
RELA-201ENST00000308639 IGFL4Q6B9Z1 124 aa16.37■□□□□ 0.21
RELA-201ENST00000308639 IGHV3-35A0A0C4DH35 117 aa16.37■□□□□ 0.21
RELA-201ENST00000308639 SYS1-DBNDD2H3BUS1 97 aa16.37■□□□□ 0.21
RELA-201ENST00000308639 GNG7O60262 68 aa16.37■□□□□ 0.21
RELA-201ENST00000308639 LY6G5BQ8NDX9 201 aa16.37■□□□□ 0.21
RELA-201ENST00000308639 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP16.36■□□□□ 0.21
RELA-201ENST00000308639 FANCD2OSQ96PS1 177 aa16.36■□□□□ 0.21
RELA-201ENST00000308639 SOX21Q9Y651 276 aaPredicted RBP16.36■□□□□ 0.21
RELA-201ENST00000308639 HAX1O00165 279 aa16.36■□□□□ 0.21
RELA-201ENST00000308639 C16orf54Q6UWD8 224 aa16.36■□□□□ 0.21
RELA-201ENST00000308639 NCBP2LA6PVI3 153 aaKnown RBP16.35■□□□□ 0.21
RELA-201ENST00000308639 PSG3Q16557 428 aa16.35■□□□□ 0.21
RELA-201ENST00000308639 ERASQ7Z444 233 aa16.35■□□□□ 0.21
RELA-201ENST00000308639 A0A1B0GUT8 65 aa16.35■□□□□ 0.21
RELA-201ENST00000308639 F8W735 103 aaPredicted RBP16.34■□□□□ 0.21
RELA-201ENST00000308639 NDFIP1Q9BT67 221 aa16.34■□□□□ 0.21
RELA-201ENST00000308639 FAM106CPP0CH98 169 aa16.34■□□□□ 0.21
RELA-201ENST00000308639 FAM106AQ4KMX7 169 aa16.34■□□□□ 0.21
RELA-201ENST00000308639 TMEM75Q8N9X5 138 aa16.34■□□□□ 0.21
RELA-201ENST00000308639 CHCHD1Q96BP2 118 aaKnown RBP16.34■□□□□ 0.21
RELA-201ENST00000308639 IGKV2-40A0A087WW87 121 aaPredicted RBP16.33■□□□□ 0.21
RELA-201ENST00000308639 IGKV2D-40P01614 121 aaPredicted RBP16.33■□□□□ 0.21
RELA-201ENST00000308639 C5orf64Q2M2E5 130 aa16.33■□□□□ 0.21
RELA-201ENST00000308639 RNF5Q99942 180 aa16.33■□□□□ 0.21
RELA-201ENST00000308639 OR11H6Q8NGC7 330 aa16.33■□□□□ 0.2
RELA-201ENST00000308639 WI2-2373I1.2A0A1W2PRP0 233 aa16.32■□□□□ 0.2
RELA-201ENST00000308639 OR2T8A6NH00 312 aa16.32■□□□□ 0.2
RELA-201ENST00000308639 K7ERU9 68 aa16.32■□□□□ 0.2
RELA-201ENST00000308639 C1RLQ9NZP8 487 aa16.32■□□□□ 0.2
RELA-201ENST00000308639 TMEM213A2RRL7 107 aa16.32■□□□□ 0.2
RELA-201ENST00000308639 FAM231BA6NCW3 169 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms