RNA–Protein interactions for RNA: ENST00000040877.1

TARBP1-201, Transcript of TAR (HIV-1) RNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TARBP1, Length 5,130 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARBP1-201ENST00000040877 A0A087WX48 190 aa18.73■□□□□ 0.59
TARBP1-201ENST00000040877 RIPPLY3P57055 190 aa18.73■□□□□ 0.59
TARBP1-201ENST00000040877 SEC11AP67812 179 aa18.73■□□□□ 0.59
TARBP1-201ENST00000040877 SLC25A20O43772 301 aa18.72■□□□□ 0.59
TARBP1-201ENST00000040877 TSPAN13O95857 204 aa18.72■□□□□ 0.59
TARBP1-201ENST00000040877 FAM215AQ9Y5M1 114 aa18.72■□□□□ 0.59
TARBP1-201ENST00000040877 MPDZO75970 2070 aa18.72■□□□□ 0.59
TARBP1-201ENST00000040877 GZMBP10144 247 aa18.72■□□□□ 0.59
TARBP1-201ENST00000040877 LOXP28300 417 aaPredicted RBP18.72■□□□□ 0.59
TARBP1-201ENST00000040877 MORN3Q6PF18 240 aaPredicted RBP18.72■□□□□ 0.59
TARBP1-201ENST00000040877 VGLL1Q99990 258 aa18.72■□□□□ 0.59
TARBP1-201ENST00000040877 VCYO14598 125 aa18.72■□□□□ 0.59
TARBP1-201ENST00000040877 MS4A6AQ9H2W1 248 aa18.72■□□□□ 0.59
TARBP1-201ENST00000040877 NDUFA4L2Q9NRX3 87 aa18.72■□□□□ 0.59
TARBP1-201ENST00000040877 OVOL3O00110 214 aa18.72■□□□□ 0.59
TARBP1-201ENST00000040877 FER1L5A0AVI2 2057 aa18.72■□□□□ 0.59
TARBP1-201ENST00000040877 TRAV12-3A0A0B4J271 114 aa18.71■□□□□ 0.59
TARBP1-201ENST00000040877 ZNF407Q9C0G0 2248 aa18.71■□□□□ 0.59
TARBP1-201ENST00000040877 D6R8Y8 96 aa18.71■□□□□ 0.59
TARBP1-201ENST00000040877 TMEM86BQ8N661 226 aa18.71■□□□□ 0.59
TARBP1-201ENST00000040877 TRGV1A0A0A0MS02 117 aa18.7■□□□□ 0.58
TARBP1-201ENST00000040877 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP18.7■□□□□ 0.58
TARBP1-201ENST00000040877 ZNF876PQ49A33 203 aa18.7■□□□□ 0.58
TARBP1-201ENST00000040877 KIAA2026Q5HYC2 2103 aa18.7■□□□□ 0.58
TARBP1-201ENST00000040877 PLXNA2O75051 1894 aa18.7■□□□□ 0.58
TARBP1-201ENST00000040877 ATP6V0E1O15342 81 aa18.7■□□□□ 0.58
TARBP1-201ENST00000040877 C10orf126Q8N4M7 172 aa18.7■□□□□ 0.58
TARBP1-201ENST00000040877 PRSS33Q8NF86 280 aa18.7■□□□□ 0.58
TARBP1-201ENST00000040877 IGF2-ASQ6U949 168 aa18.69■□□□□ 0.58
TARBP1-201ENST00000040877 E9PQ18 207 aa18.69■□□□□ 0.58
TARBP1-201ENST00000040877 Q86TA4 180 aa18.69■□□□□ 0.58
TARBP1-201ENST00000040877 Q8TAT8 98 aa18.69■□□□□ 0.58
TARBP1-201ENST00000040877 GFRA4Q9GZZ7 299 aa18.69■□□□□ 0.58
TARBP1-201ENST00000040877 ZNF815PA8K554 130 aa18.69■□□□□ 0.58
TARBP1-201ENST00000040877 ADCYAP1P18509 176 aa18.68■□□□□ 0.58
TARBP1-201ENST00000040877 USF3Q68DE3 2245 aa18.68■□□□□ 0.58
TARBP1-201ENST00000040877 IGKV3D-20A0A0C4DH25 116 aa18.68■□□□□ 0.58
TARBP1-201ENST00000040877 C17orf58Q2M2W7 97 aa18.68■□□□□ 0.58
TARBP1-201ENST00000040877 WDR86Q86TI4 376 aa18.68■□□□□ 0.58
TARBP1-201ENST00000040877 NUP35Q8NFH5 326 aa18.68■□□□□ 0.58
TARBP1-201ENST00000040877 KAAG1Q9UBP8 84 aa18.68■□□□□ 0.58
TARBP1-201ENST00000040877 OR5A1Q8NGJ0 315 aa18.68■□□□□ 0.58
TARBP1-201ENST00000040877 RUSC1-AS1Q66K80 236 aa18.67■□□□□ 0.58
TARBP1-201ENST00000040877 OR2K2Q8NGT1 345 aa18.67■□□□□ 0.58
TARBP1-201ENST00000040877 SIGMAR1Q99720 223 aa18.67■□□□□ 0.58
TARBP1-201ENST00000040877 SYNJ2BPP57105 145 aa18.67■□□□□ 0.58
TARBP1-201ENST00000040877 NHP2Q9NX24 153 aaKnown RBP18.67■□□□□ 0.58
TARBP1-201ENST00000040877 J3QKU1 62 aa18.67■□□□□ 0.58
TARBP1-201ENST00000040877 FANCMQ8IYD8 2048 aa18.66■□□□□ 0.58
TARBP1-201ENST00000040877 ORAOV1Q8WV07 137 aa18.66■□□□□ 0.58
TARBP1-201ENST00000040877 PLEKHB2Q96CS7 222 aa18.66■□□□□ 0.58
TARBP1-201ENST00000040877 MRPL27Q9P0M9 148 aaKnown RBP18.66■□□□□ 0.58
TARBP1-201ENST00000040877 NCR2O95944 276 aa18.65■□□□□ 0.58
TARBP1-201ENST00000040877 MLANAQ16655 118 aa18.65■□□□□ 0.58
TARBP1-201ENST00000040877 KIAA1671Q9BY89 1806 aa18.65■□□□□ 0.58
TARBP1-201ENST00000040877 ANAPC1Q9H1A4 1944 aa18.65■□□□□ 0.58
TARBP1-201ENST00000040877 WNK2Q9Y3S1 2297 aa18.64■□□□□ 0.58
TARBP1-201ENST00000040877 ZNF503-AS2A6NEH8 195 aa18.64■□□□□ 0.58
TARBP1-201ENST00000040877 ZNF664Q8N3J9 261 aa18.64■□□□□ 0.58
TARBP1-201ENST00000040877 TMEM238C9JI98 176 aa18.64■□□□□ 0.57
TARBP1-201ENST00000040877 TEX43Q6ZNM6 134 aa18.64■□□□□ 0.57
TARBP1-201ENST00000040877 TMEM75Q8N9X5 138 aa18.64■□□□□ 0.57
TARBP1-201ENST00000040877 WISP1O95388 367 aa18.64■□□□□ 0.57
TARBP1-201ENST00000040877 IGLV3-1P01715 115 aa18.64■□□□□ 0.57
TARBP1-201ENST00000040877 RPL35AP18077 110 aaKnown RBP18.64■□□□□ 0.57
TARBP1-201ENST00000040877 RSPO1Q2MKA7 263 aaPredicted RBP18.64■□□□□ 0.57
TARBP1-201ENST00000040877 TRAV8-1A0A0A6YYK1 113 aa18.64■□□□□ 0.57
TARBP1-201ENST00000040877 ZNF492Q9P255 531 aa18.64■□□□□ 0.57
TARBP1-201ENST00000040877 HSD52Q0P140 79 aa18.63■□□□□ 0.57
TARBP1-201ENST00000040877 FAM231BA6NCW3 169 aa18.63■□□□□ 0.57
TARBP1-201ENST00000040877 LINC01619G3V211 115 aa18.63■□□□□ 0.57
TARBP1-201ENST00000040877 ABCA1O95477 2261 aa18.63■□□□□ 0.57
TARBP1-201ENST00000040877 C3orf56Q8N813 242 aa18.63■□□□□ 0.57
TARBP1-201ENST00000040877 ZNF524Q96C55 264 aa18.63■□□□□ 0.57
TARBP1-201ENST00000040877 RSPO3Q9BXY4 272 aaPredicted RBP18.63■□□□□ 0.57
TARBP1-201ENST00000040877 CD300EQ496F6 205 aaPredicted RBP18.63■□□□□ 0.57
TARBP1-201ENST00000040877 IGFL2Q6UWQ7 119 aa18.63■□□□□ 0.57
TARBP1-201ENST00000040877 TMEM256Q8N2U0 113 aa18.63■□□□□ 0.57
TARBP1-201ENST00000040877 Q96MF0 132 aa18.63■□□□□ 0.57
TARBP1-201ENST00000040877 C15orf65H3BRN8 121 aa18.62■□□□□ 0.57
TARBP1-201ENST00000040877 TRAV2A0A0B4J234 112 aa18.62■□□□□ 0.57
TARBP1-201ENST00000040877 TMEM249Q2WGJ8 235 aa18.62■□□□□ 0.57
TARBP1-201ENST00000040877 SLX1AQ9BQ83 275 aa18.62■□□□□ 0.57
TARBP1-201ENST00000040877 ZNRD1Q9P1U0 126 aa18.62■□□□□ 0.57
TARBP1-201ENST00000040877 HOXA3O43365 443 aaPredicted RBP18.62■□□□□ 0.57
TARBP1-201ENST00000040877 CKS1BP61024 79 aa18.61■□□□□ 0.57
TARBP1-201ENST00000040877 RASL10AQ92737 203 aa18.61■□□□□ 0.57
TARBP1-201ENST00000040877 DEFB131AP59861 70 aa18.61■□□□□ 0.57
TARBP1-201ENST00000040877 CR1LQ2VPA4 569 aa18.61■□□□□ 0.57
TARBP1-201ENST00000040877 C1orf122Q6ZSJ8 110 aa18.61■□□□□ 0.57
TARBP1-201ENST00000040877 RHODO00212 210 aa18.61■□□□□ 0.57
TARBP1-201ENST00000040877 FAM90A2PQ658T7 463 aa18.61■□□□□ 0.57
TARBP1-201ENST00000040877 UBE2DNLQ8IWF7 75 aa18.61■□□□□ 0.57
TARBP1-201ENST00000040877 C14orf178Q8N769 122 aaPredicted RBP18.61■□□□□ 0.57
TARBP1-201ENST00000040877 NDUFA4O00483 81 aa18.6■□□□□ 0.57
TARBP1-201ENST00000040877 CT83Q5H943 113 aa18.6■□□□□ 0.57
TARBP1-201ENST00000040877 SELENOKQ9Y6D0 94 aa18.6■□□□□ 0.57
TARBP1-201ENST00000040877 PAX2Q02962 417 aa18.6■□□□□ 0.57
TARBP1-201ENST00000040877 C8orf31Q8N9H6 132 aa18.6■□□□□ 0.57
TARBP1-201ENST00000040877 IGFL4Q6B9Z1 124 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 111.9 ms