RNA–Protein interactions for RNA: ENST00000558583.2

SHISA9-203, Transcript of shisa family member 9, humanhuman

APPRIS P4 TSL 5 BASIC

Gene SHISA9, Length 6,724 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA9-203ENST00000558583 FOXG1P55316 489 aaPredicted RBP12.9□□□□□ -0.34
SHISA9-203ENST00000558583 MLANAQ16655 118 aa12.9□□□□□ -0.34
SHISA9-203ENST00000558583 RNF144BQ7Z419 303 aa12.9□□□□□ -0.34
SHISA9-203ENST00000558583 DIDO1Q9BTC0 2240 aaKnown RBP12.9□□□□□ -0.34
SHISA9-203ENST00000558583 CABIN1Q9Y6J0 2220 aa12.9□□□□□ -0.34
SHISA9-203ENST00000558583 ZFP36L1Q07352 338 aaKnown RBP12.9□□□□□ -0.34
SHISA9-203ENST00000558583 YLPM1P49750 1951 aaKnown RBP12.9□□□□□ -0.34
SHISA9-203ENST00000558583 SRRM4A7MD48 611 aaKnown RBP12.9□□□□□ -0.35
SHISA9-203ENST00000558583 VWC2LB2RUY7 222 aa12.9□□□□□ -0.35
SHISA9-203ENST00000558583 TREML4Q6UXN2 200 aa12.9□□□□□ -0.35
SHISA9-203ENST00000558583 SRSF8Q9BRL6 282 aaKnown RBP12.9□□□□□ -0.35
SHISA9-203ENST00000558583 TRAV9-1A0A075B6T8 112 aa12.89□□□□□ -0.35
SHISA9-203ENST00000558583 COLCA2A8K830 154 aa12.89□□□□□ -0.35
SHISA9-203ENST00000558583 DLEU1O43261 78 aa12.89□□□□□ -0.35
SHISA9-203ENST00000558583 ZNF114Q8NC26 417 aa12.89□□□□□ -0.35
SHISA9-203ENST00000558583 HOXD3P31249 432 aaPredicted RBP12.89□□□□□ -0.35
SHISA9-203ENST00000558583 LYPD2Q6UXB3 125 aa12.89□□□□□ -0.35
SHISA9-203ENST00000558583 PAQR4Q8N4S7 273 aaPredicted RBP12.89□□□□□ -0.35
SHISA9-203ENST00000558583 TRPM7Q96QT4 1865 aa12.89□□□□□ -0.35
SHISA9-203ENST00000558583 DOPEY2Q9Y3R5 2298 aa12.89□□□□□ -0.35
SHISA9-203ENST00000558583 SAA4P35542 130 aa12.89□□□□□ -0.35
SHISA9-203ENST00000558583 LINC00479Q96M42 142 aa12.89□□□□□ -0.35
SHISA9-203ENST00000558583 F8VVB4 439 aa12.89□□□□□ -0.35
SHISA9-203ENST00000558583 F8VWA3 439 aa12.89□□□□□ -0.35
SHISA9-203ENST00000558583 SLC50A1Q9BRV3 221 aa12.89□□□□□ -0.35
SHISA9-203ENST00000558583 MSMBP08118 114 aa12.89□□□□□ -0.35
SHISA9-203ENST00000558583 XIRP1Q702N8 1843 aaKnown RBP12.89□□□□□ -0.35
SHISA9-203ENST00000558583 AKAP6Q13023 2319 aa12.88□□□□□ -0.35
SHISA9-203ENST00000558583 TRAV12-1A0A0B4J245 112 aa12.88□□□□□ -0.35
SHISA9-203ENST00000558583 DKK4Q9UBT3 224 aa12.88□□□□□ -0.35
SHISA9-203ENST00000558583 TMEM178BH3BS89 294 aa12.88□□□□□ -0.35
SHISA9-203ENST00000558583 C3orf79P0CE67 100 aa12.88□□□□□ -0.35
SHISA9-203ENST00000558583 DUTP33316 252 aaKnown RBP12.88□□□□□ -0.35
SHISA9-203ENST00000558583 DEFB131AP59861 70 aa12.88□□□□□ -0.35
SHISA9-203ENST00000558583 TCF15Q12870 199 aa12.88□□□□□ -0.35
SHISA9-203ENST00000558583 CLPSL2Q6UWE3 100 aa12.88□□□□□ -0.35
SHISA9-203ENST00000558583 IGHV1-3A0A0C4DH29 117 aa12.88□□□□□ -0.35
SHISA9-203ENST00000558583 YPEL1O60688 119 aa12.88□□□□□ -0.35
SHISA9-203ENST00000558583 AMN1Q8IY45 258 aa12.88□□□□□ -0.35
SHISA9-203ENST00000558583 YPEL2Q96QA6 119 aa12.88□□□□□ -0.35
SHISA9-203ENST00000558583 KNCNA6PVL3 124 aa12.88□□□□□ -0.35
SHISA9-203ENST00000558583 C22orf46C9J442 243 aa12.88□□□□□ -0.35
SHISA9-203ENST00000558583 MST1P26927 711 aa12.88□□□□□ -0.35
SHISA9-203ENST00000558583 PVRIGQ6DKI7 326 aa12.88□□□□□ -0.35
SHISA9-203ENST00000558583 ZNRD1Q9P1U0 126 aa12.88□□□□□ -0.35
SHISA9-203ENST00000558583 COL5A3P25940 1745 aaPredicted RBP12.87□□□□□ -0.35
SHISA9-203ENST00000558583 C5orf63A6NC05 138 aa12.87□□□□□ -0.35
SHISA9-203ENST00000558583 LINC01619G3V211 115 aa12.87□□□□□ -0.35
SHISA9-203ENST00000558583 ZNF561-AS1K7EIQ3 104 aa12.87□□□□□ -0.35
SHISA9-203ENST00000558583 TEX43Q6ZNM6 134 aa12.87□□□□□ -0.35
SHISA9-203ENST00000558583 COL4A1P02462 1669 aa12.87□□□□□ -0.35
SHISA9-203ENST00000558583 PRCDQ00LT1 54 aa12.87□□□□□ -0.35
SHISA9-203ENST00000558583 GGTLC1Q9BX51 225 aa12.87□□□□□ -0.35
SHISA9-203ENST00000558583 TMEM238C9JI98 176 aa12.87□□□□□ -0.35
SHISA9-203ENST00000558583 C6orf226Q5I0X4 101 aa12.87□□□□□ -0.35
SHISA9-203ENST00000558583 MORN3Q6PF18 240 aaPredicted RBP12.87□□□□□ -0.35
SHISA9-203ENST00000558583 RPL36AP83881 106 aaKnown RBP12.87□□□□□ -0.35
SHISA9-203ENST00000558583 RPL36ALQ969Q0 106 aaKnown RBP12.87□□□□□ -0.35
SHISA9-203ENST00000558583 GAGE12BA1L429 117 aa12.87□□□□□ -0.35
SHISA9-203ENST00000558583 IGHV1-8P0DP01 117 aa12.87□□□□□ -0.35
SHISA9-203ENST00000558583 PAX9P55771 341 aa12.87□□□□□ -0.35
SHISA9-203ENST00000558583 SEC11AP67812 179 aa12.87□□□□□ -0.35
SHISA9-203ENST00000558583 RSPO3Q9BXY4 272 aaPredicted RBP12.87□□□□□ -0.35
SHISA9-203ENST00000558583 SEC16AO15027 2179 aa12.87□□□□□ -0.35
SHISA9-203ENST00000558583 FANCMQ8IYD8 2048 aa12.86□□□□□ -0.35
SHISA9-203ENST00000558583 IGKV1-12A0A0C4DH73 117 aa12.86□□□□□ -0.35
SHISA9-203ENST00000558583 IGKV1D-12P01611 117 aa12.86□□□□□ -0.35
SHISA9-203ENST00000558583 IGLV3-21P80748 117 aaPredicted RBP12.86□□□□□ -0.35
SHISA9-203ENST00000558583 ZNF664Q8N3J9 261 aa12.86□□□□□ -0.35
SHISA9-203ENST00000558583 K7ENP7 123 aa12.86□□□□□ -0.35
SHISA9-203ENST00000558583 OVOL1O14753 267 aa12.86□□□□□ -0.35
SHISA9-203ENST00000558583 ABCA4P78363 2273 aa12.86□□□□□ -0.35
SHISA9-203ENST00000558583 FAM90A1Q86YD7 464 aa12.85□□□□□ -0.35
SHISA9-203ENST00000558583 C8orf49Q96NF6 230 aa12.85□□□□□ -0.35
SHISA9-203ENST00000558583 J3QW42 95 aa12.85□□□□□ -0.35
SHISA9-203ENST00000558583 SS18Q15532 418 aa12.85□□□□□ -0.35
SHISA9-203ENST00000558583 PYY3Q5JQD4 70 aa12.85□□□□□ -0.35
SHISA9-203ENST00000558583 ATP5IP56385 69 aaPredicted RBP12.85□□□□□ -0.35
SHISA9-203ENST00000558583 AGMATQ9BSE5 352 aa12.84□□□□□ -0.35
SHISA9-203ENST00000558583 Q9HAA7 133 aa12.84□□□□□ -0.35
SHISA9-203ENST00000558583 IGKV1-27A0A075B6S5 117 aa12.84□□□□□ -0.35
SHISA9-203ENST00000558583 F2Z2F3 143 aa12.84□□□□□ -0.35
SHISA9-203ENST00000558583 NTN3O00634 580 aaPredicted RBP12.84□□□□□ -0.35
SHISA9-203ENST00000558583 EFNA2O43921 213 aa12.84□□□□□ -0.35
SHISA9-203ENST00000558583 DKK1O94907 266 aa12.84□□□□□ -0.35
SHISA9-203ENST00000558583 C9orf153Q5TBE3 101 aa12.84□□□□□ -0.35
SHISA9-203ENST00000558583 GAGE12JA6NER3 117 aa12.84□□□□□ -0.35
SHISA9-203ENST00000558583 LEPROTO15243 131 aa12.84□□□□□ -0.35
SHISA9-203ENST00000558583 APOC4P55056 127 aa12.84□□□□□ -0.35
SHISA9-203ENST00000558583 GAGE1Q13065 139 aa12.84□□□□□ -0.35
SHISA9-203ENST00000558583 GAGE4Q13068 117 aa12.84□□□□□ -0.35
SHISA9-203ENST00000558583 GAGE5Q13069 117 aa12.84□□□□□ -0.35
SHISA9-203ENST00000558583 MORN5Q5VZ52 161 aa12.84□□□□□ -0.35
SHISA9-203ENST00000558583 THAP8Q8NA92 274 aa12.84□□□□□ -0.35
SHISA9-203ENST00000558583 CYTL1Q9NRR1 136 aa12.84□□□□□ -0.35
SHISA9-203ENST00000558583 ANAPC10Q9UM13 185 aa12.84□□□□□ -0.35
SHISA9-203ENST00000558583 TRAV26-2A0A0B4J265 109 aa12.83□□□□□ -0.36
SHISA9-203ENST00000558583 GAGE7O76087 117 aa12.83□□□□□ -0.36
SHISA9-203ENST00000558583 GAGE12FP0CL80 117 aa12.83□□□□□ -0.36
SHISA9-203ENST00000558583 GAGE12GP0CL81 117 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms