RNA–Protein interactions for RNA: ENST00000542866.2

KDM3B-209, Transcript of lysine demethylase 3B, humanhuman

TSL 2 BASIC

Gene KDM3B, Length 3,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-209ENST00000542866 SRRM5B3KS81 715 aa4.28□□□□□ -1.72
KDM3B-209ENST00000542866 APELAP0DMC3 54 aa4.28□□□□□ -1.72
KDM3B-209ENST00000542866 COL8A1P27658 744 aa4.28□□□□□ -1.72
KDM3B-209ENST00000542866 C10orf55Q5SWW7 151 aa4.28□□□□□ -1.72
KDM3B-209ENST00000542866 FAM71F2Q6NXP2 309 aa4.28□□□□□ -1.72
KDM3B-209ENST00000542866 PET117Q6UWS5 81 aa4.28□□□□□ -1.72
KDM3B-209ENST00000542866 OR8A1Q8NGG7 326 aa4.28□□□□□ -1.72
KDM3B-209ENST00000542866 PRSS3P2Q8NHM4 247 aa4.28□□□□□ -1.72
KDM3B-209ENST00000542866 HARBI1Q96MB7 349 aa4.28□□□□□ -1.72
KDM3B-209ENST00000542866 CRXO43186 299 aaPredicted RBP4.28□□□□□ -1.72
KDM3B-209ENST00000542866 APOHP02749 345 aaPredicted RBP4.28□□□□□ -1.72
KDM3B-209ENST00000542866 CT45A6P0DMU7 189 aa4.28□□□□□ -1.72
KDM3B-209ENST00000542866 CT45A5P0DMU8 189 aa4.28□□□□□ -1.72
KDM3B-209ENST00000542866 CT45A7P0DMV0 189 aa4.28□□□□□ -1.72
KDM3B-209ENST00000542866 GNLYP22749 145 aa4.28□□□□□ -1.72
KDM3B-209ENST00000542866 LGALS7P47929 136 aa4.28□□□□□ -1.72
KDM3B-209ENST00000542866 MZT1Q08AG7 82 aa4.28□□□□□ -1.72
KDM3B-209ENST00000542866 TMEM97Q5BJF2 176 aa4.28□□□□□ -1.72
KDM3B-209ENST00000542866 GTF2H5Q6ZYL4 71 aa4.28□□□□□ -1.72
KDM3B-209ENST00000542866 FER1L6-AS1Q8NA97 138 aa4.28□□□□□ -1.72
KDM3B-209ENST00000542866 OR1L8Q8NGR8 309 aa4.28□□□□□ -1.72
KDM3B-209ENST00000542866 GLMPQ8WWB7 406 aa4.28□□□□□ -1.72
KDM3B-209ENST00000542866 FXYD5Q96DB9 178 aa4.28□□□□□ -1.72
KDM3B-209ENST00000542866 ASCL2Q99929 193 aa4.28□□□□□ -1.72
KDM3B-209ENST00000542866 CITED2Q99967 270 aaPredicted RBP4.28□□□□□ -1.72
KDM3B-209ENST00000542866 ZNF257Q9Y2Q1 563 aa4.28□□□□□ -1.72
KDM3B-209ENST00000542866 CADP27708 2225 aa4.28□□□□□ -1.72
KDM3B-209ENST00000542866 BAHCC1Q9P281 2608 aa4.28□□□□□ -1.72
KDM3B-209ENST00000542866 DOPEY2Q9Y3R5 2298 aa4.27□□□□□ -1.73
KDM3B-209ENST00000542866 TRAV8-1A0A0A6YYK1 113 aa4.27□□□□□ -1.73
KDM3B-209ENST00000542866 LOC389332A0A1B0GUA5 103 aa4.27□□□□□ -1.73
KDM3B-209ENST00000542866 A0A1B0GV72 72 aa4.27□□□□□ -1.73
KDM3B-209ENST00000542866 A0A1B0GW15 77 aa4.27□□□□□ -1.73
KDM3B-209ENST00000542866 hADV38S2A0JD32 116 aa4.27□□□□□ -1.73
KDM3B-209ENST00000542866 E7EUB6 86 aa4.27□□□□□ -1.73
KDM3B-209ENST00000542866 IGLC1P0CG04 106 aa4.27□□□□□ -1.73
KDM3B-209ENST00000542866 RBPMS2Q6ZRY4 209 aaKnown RBP4.27□□□□□ -1.73
KDM3B-209ENST00000542866 FA2HQ7L5A8 372 aa4.27□□□□□ -1.73
KDM3B-209ENST00000542866 CIARTQ8N365 385 aaPredicted RBP4.27□□□□□ -1.73
KDM3B-209ENST00000542866 ITLN1Q8WWA0 313 aa4.27□□□□□ -1.73
KDM3B-209ENST00000542866 H1FXQ92522 213 aaKnown RBP4.27□□□□□ -1.73
KDM3B-209ENST00000542866 CCL13Q99616 98 aa4.27□□□□□ -1.73
KDM3B-209ENST00000542866 MS4A6AQ9H2W1 248 aa4.27□□□□□ -1.73
KDM3B-209ENST00000542866 LRRK2Q5S007 2527 aa4.27□□□□□ -1.73
KDM3B-209ENST00000542866 JMJD1CQ15652 2540 aa4.27□□□□□ -1.73
KDM3B-209ENST00000542866 PTPRBP23467 1997 aa4.27□□□□□ -1.73
KDM3B-209ENST00000542866 MBD3L4A6NDZ8 208 aaPredicted RBP4.27□□□□□ -1.73
KDM3B-209ENST00000542866 MBD3L3A6NE82 208 aaPredicted RBP4.27□□□□□ -1.73
KDM3B-209ENST00000542866 MBD3L5A6NJ08 208 aaPredicted RBP4.27□□□□□ -1.73
KDM3B-209ENST00000542866 ID1P41134 155 aa4.27□□□□□ -1.73
KDM3B-209ENST00000542866 FXYD7P58549 80 aa4.27□□□□□ -1.73
KDM3B-209ENST00000542866 HCP5Q6MZN7 132 aa4.27□□□□□ -1.73
KDM3B-209ENST00000542866 PRNTQ86SH4 94 aa4.27□□□□□ -1.73
KDM3B-209ENST00000542866 ZNF436-AS1Q8NC38 126 aaPredicted RBP4.27□□□□□ -1.73
KDM3B-209ENST00000542866 MBD3L2Q8NHZ7 208 aaPredicted RBP4.27□□□□□ -1.73
KDM3B-209ENST00000542866 ZNF714Q96N38 554 aa4.27□□□□□ -1.73
KDM3B-209ENST00000542866 RAB9BQ9NP90 201 aa4.27□□□□□ -1.73
KDM3B-209ENST00000542866 RALYQ9UKM9 306 aaKnown RBP4.27□□□□□ -1.73
KDM3B-209ENST00000542866 PCSK5Q92824 1860 aa4.27□□□□□ -1.73
KDM3B-209ENST00000542866 TCRBV4S1A1TA0A5B7 111 aa4.27□□□□□ -1.73
KDM3B-209ENST00000542866 PSMB11A5LHX3 300 aa4.27□□□□□ -1.73
KDM3B-209ENST00000542866 NCR2O95944 276 aa4.27□□□□□ -1.73
KDM3B-209ENST00000542866 IGKV3-15P01624 115 aa4.27□□□□□ -1.73
KDM3B-209ENST00000542866 COX8AP10176 69 aa4.27□□□□□ -1.73
KDM3B-209ENST00000542866 GUSBP1Q15486 140 aa4.27□□□□□ -1.73
KDM3B-209ENST00000542866 Q8NA96 180 aa4.27□□□□□ -1.73
KDM3B-209ENST00000542866 PERPQ96FX8 193 aa4.27□□□□□ -1.73
KDM3B-209ENST00000542866 MRPL20Q9BYC9 149 aaKnown RBP4.27□□□□□ -1.73
KDM3B-209ENST00000542866 C7orf69Q9H7B7 122 aa4.27□□□□□ -1.73
KDM3B-209ENST00000542866 AP5S1Q9NUS5 200 aa4.27□□□□□ -1.73
KDM3B-209ENST00000542866 C1RLQ9NZP8 487 aa4.27□□□□□ -1.73
KDM3B-209ENST00000542866 MRPL36Q9P0J6 103 aaKnown RBP4.27□□□□□ -1.73
KDM3B-209ENST00000542866 ABCA1O95477 2261 aa4.27□□□□□ -1.73
KDM3B-209ENST00000542866 MTORP42345 2549 aa4.26□□□□□ -1.73
KDM3B-209ENST00000542866 DYSFO75923 2080 aa4.26□□□□□ -1.73
KDM3B-209ENST00000542866 J3QKU1 62 aa4.26□□□□□ -1.73
KDM3B-209ENST00000542866 CD3EP07766 207 aa4.26□□□□□ -1.73
KDM3B-209ENST00000542866 KIR2DL2P43627 348 aaPredicted RBP4.26□□□□□ -1.73
KDM3B-209ENST00000542866 SUB1P53999 127 aaKnown RBP eCLIP4.26□□□□□ -1.73
KDM3B-209ENST00000542866 FAM27E3Q08E93 113 aa4.26□□□□□ -1.73
KDM3B-209ENST00000542866 BOD1L2Q8IYS8 172 aa4.26□□□□□ -1.73
KDM3B-209ENST00000542866 FAM216BQ8N7L0 139 aa4.26□□□□□ -1.73
KDM3B-209ENST00000542866 IGHV1-18A0A0C4DH31 117 aa4.26□□□□□ -1.73
KDM3B-209ENST00000542866 A6NDN8 102 aa4.26□□□□□ -1.73
KDM3B-209ENST00000542866 PRB1P04280 392 aa4.26□□□□□ -1.73
KDM3B-209ENST00000542866 GATA4P43694 442 aa4.26□□□□□ -1.73
KDM3B-209ENST00000542866 CSN1S1P47710 185 aa4.26□□□□□ -1.73
KDM3B-209ENST00000542866 ATP5J2P56134 94 aa4.26□□□□□ -1.73
KDM3B-209ENST00000542866 RPL24P83731 157 aaKnown RBP4.26□□□□□ -1.73
KDM3B-209ENST00000542866 PAX2Q02962 417 aa4.26□□□□□ -1.73
KDM3B-209ENST00000542866 WT1-ASQ06250 92 aa4.26□□□□□ -1.73
KDM3B-209ENST00000542866 POU2AF1Q16633 256 aa4.26□□□□□ -1.73
KDM3B-209ENST00000542866 MSMPQ1L6U9 139 aa4.26□□□□□ -1.73
KDM3B-209ENST00000542866 CR1LQ2VPA4 569 aa4.26□□□□□ -1.73
KDM3B-209ENST00000542866 C2orf91Q6ZV80 131 aa4.26□□□□□ -1.73
KDM3B-209ENST00000542866 SRSF12Q8WXF0 261 aaKnown RBP4.26□□□□□ -1.73
KDM3B-209ENST00000542866 DPF1Q92782 380 aa4.26□□□□□ -1.73
KDM3B-209ENST00000542866 NDFIP1Q9BT67 221 aa4.26□□□□□ -1.73
KDM3B-209ENST00000542866 Q9H3A6 140 aa4.26□□□□□ -1.73
KDM3B-209ENST00000542866 NDUFA4L2Q9NRX3 87 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms