RNA–Protein interactions for RNA: ENST00000527718.1

PABPC4-222, Transcript of poly(A) binding protein cytoplasmic 4, human

TSL 5

Gene PABPC4, Length 746 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PABPC4-222	ENST00000527718	SRSF3	P84103	164 aa	Known RBP	4.94	□□□□□ -1.62
PABPC4-222	ENST00000527718	C15orf32	Q32M92	178 aa		4.94	□□□□□ -1.62
PABPC4-222	ENST00000527718	MIR17HG	Q75NE6	70 aa		4.94	□□□□□ -1.62
PABPC4-222	ENST00000527718	RNF152	Q8N8N0	203 aa		4.94	□□□□□ -1.62
PABPC4-222	ENST00000527718	DAZAP1	Q96EP5	407 aa	Known RBP	4.94	□□□□□ -1.62
PABPC4-222	ENST00000527718		Q96MF0	132 aa		4.94	□□□□□ -1.62
PABPC4-222	ENST00000527718	NDFIP1	Q9BT67	221 aa		4.94	□□□□□ -1.62
PABPC4-222	ENST00000527718	SHANK2-AS3	Q9BTD1	123 aa		4.94	□□□□□ -1.62
PABPC4-222	ENST00000527718	TPPP3	Q9BW30	176 aa		4.94	□□□□□ -1.62
PABPC4-222	ENST00000527718	SLC25A39	Q9BZJ4	359 aa	Predicted RBP	4.94	□□□□□ -1.62
PABPC4-222	ENST00000527718	GNB4	Q9HAV0	340 aa		4.94	□□□□□ -1.62
PABPC4-222	ENST00000527718	CDC42EP3	Q9UKI2	254 aa		4.94	□□□□□ -1.62
PABPC4-222	ENST00000527718	VPREB3	Q9UKI3	123 aa		4.94	□□□□□ -1.62
PABPC4-222	ENST00000527718	FBN2	P35556	2912 aa		4.94	□□□□□ -1.62
PABPC4-222	ENST00000527718	CREBBP	Q92793	2442 aa		4.93	□□□□□ -1.62
PABPC4-222	ENST00000527718	IGKV1OR2-108	A0A075B7D4	117 aa		4.93	□□□□□ -1.62
PABPC4-222	ENST00000527718	TRBV9	A0A0B4J1U6	114 aa		4.93	□□□□□ -1.62
PABPC4-222	ENST00000527718		E7EUB6	86 aa		4.93	□□□□□ -1.62
PABPC4-222	ENST00000527718	ATP6V0E1	O15342	81 aa		4.93	□□□□□ -1.62
PABPC4-222	ENST00000527718	OR2J3	O76001	311 aa		4.93	□□□□□ -1.62
PABPC4-222	ENST00000527718	NDUFB4	O95168	129 aa		4.93	□□□□□ -1.62
PABPC4-222	ENST00000527718	TRGV3	P03979	118 aa		4.93	□□□□□ -1.62
PABPC4-222	ENST00000527718	SLC25A5	P05141	298 aa	Known RBP	4.93	□□□□□ -1.62
PABPC4-222	ENST00000527718	CRYBA1	P05813	215 aa		4.93	□□□□□ -1.62
PABPC4-222	ENST00000527718	CT45A10	P0DMU9	189 aa		4.93	□□□□□ -1.62
PABPC4-222	ENST00000527718	IGHV4-31	P0DP07	118 aa		4.93	□□□□□ -1.62
PABPC4-222	ENST00000527718	NPPC	P23582	126 aa		4.93	□□□□□ -1.62
PABPC4-222	ENST00000527718	CD24	P25063	80 aa		4.93	□□□□□ -1.62
PABPC4-222	ENST00000527718	FAM3B	P58499	235 aa	Predicted RBP	4.93	□□□□□ -1.62
PABPC4-222	ENST00000527718	ZNF90	Q03938	601 aa		4.93	□□□□□ -1.62
PABPC4-222	ENST00000527718	MRGPRG-AS1	Q2M3A8	158 aa		4.93	□□□□□ -1.62
PABPC4-222	ENST00000527718	FAM106A	Q4KMX7	169 aa		4.93	□□□□□ -1.62
PABPC4-222	ENST00000527718	FAM90A2P	Q658T7	463 aa		4.93	□□□□□ -1.62
PABPC4-222	ENST00000527718	TEX38	Q6PEX7	206 aa		4.93	□□□□□ -1.62
PABPC4-222	ENST00000527718	BRD3OS	Q6XYD6	125 aa		4.93	□□□□□ -1.62
PABPC4-222	ENST00000527718	OR8I2	Q8N0Y5	310 aa		4.93	□□□□□ -1.62
PABPC4-222	ENST00000527718	TMEM37	Q8WXS4	190 aa		4.93	□□□□□ -1.62
PABPC4-222	ENST00000527718	SLC50A1	Q9BRV3	221 aa		4.93	□□□□□ -1.62
PABPC4-222	ENST00000527718	ATG101	Q9BSB4	218 aa		4.93	□□□□□ -1.62
PABPC4-222	ENST00000527718	FAM103A1	Q9BTL3	118 aa	Known RBP	4.93	□□□□□ -1.62
PABPC4-222	ENST00000527718	SCRT1	Q9BWW7	348 aa		4.93	□□□□□ -1.62
PABPC4-222	ENST00000527718	MRPL27	Q9P0M9	148 aa	Known RBP	4.93	□□□□□ -1.62
PABPC4-222	ENST00000527718	ZFP30	Q9Y2G7	519 aa		4.93	□□□□□ -1.62
PABPC4-222	ENST00000527718	MYO9A	B2RTY4	2548 aa		4.92	□□□□□ -1.62
PABPC4-222	ENST00000527718	IGKV1D-37	A0A075B6S9	117 aa		4.92	□□□□□ -1.62
PABPC4-222	ENST00000527718	WI2-2373I1.2	A0A1W2PRP0	233 aa		4.92	□□□□□ -1.62
PABPC4-222	ENST00000527718		H3BRN7	92 aa		4.92	□□□□□ -1.62
PABPC4-222	ENST00000527718		M0QZ24	198 aa		4.92	□□□□□ -1.62
PABPC4-222	ENST00000527718	DNASE2	O00115	360 aa	Predicted RBP	4.92	□□□□□ -1.62
PABPC4-222	ENST00000527718	NDUFA4	O00483	81 aa		4.92	□□□□□ -1.62
PABPC4-222	ENST00000527718	PEX7	O00628	323 aa		4.92	□□□□□ -1.62
PABPC4-222	ENST00000527718	GGCT	O75223	188 aa	Known RBP	4.92	□□□□□ -1.62
PABPC4-222	ENST00000527718	S100A8	P05109	93 aa		4.92	□□□□□ -1.62
PABPC4-222	ENST00000527718	CLEC3B	P05452	202 aa		4.92	□□□□□ -1.62
PABPC4-222	ENST00000527718	ELANE	P08246	267 aa		4.92	□□□□□ -1.62
PABPC4-222	ENST00000527718	APELA	P0DMC3	54 aa		4.92	□□□□□ -1.62
PABPC4-222	ENST00000527718	IGHV4-38-2	P0DP08	117 aa		4.92	□□□□□ -1.62
PABPC4-222	ENST00000527718	RAB5A	P20339	215 aa		4.92	□□□□□ -1.62
PABPC4-222	ENST00000527718	RPL35	P42766	123 aa	Known RBP	4.92	□□□□□ -1.62
PABPC4-222	ENST00000527718	DLX1	P56177	255 aa		4.92	□□□□□ -1.62
PABPC4-222	ENST00000527718	TPPP2	P59282	170 aa		4.92	□□□□□ -1.62
PABPC4-222	ENST00000527718	ERVFC1-1	P60608	527 aa		4.92	□□□□□ -1.62
PABPC4-222	ENST00000527718	PRB3	Q04118	309 aa	Predicted RBP	4.92	□□□□□ -1.62
PABPC4-222	ENST00000527718	GCSAML	Q5JQS6	135 aa		4.92	□□□□□ -1.62
PABPC4-222	ENST00000527718	LDLRAD2	Q5SZI1	272 aa		4.92	□□□□□ -1.62
PABPC4-222	ENST00000527718	TMEM88	Q6PEY1	159 aa		4.92	□□□□□ -1.62
PABPC4-222	ENST00000527718	C1QL4	Q86Z23	238 aa		4.92	□□□□□ -1.62
PABPC4-222	ENST00000527718	OR10G8	Q8NGN5	311 aa		4.92	□□□□□ -1.62
PABPC4-222	ENST00000527718	ZNF502	Q8TBZ5	544 aa		4.92	□□□□□ -1.62
PABPC4-222	ENST00000527718	BORCS7	Q96B45	105 aa		4.92	□□□□□ -1.62
PABPC4-222	ENST00000527718	SFRP2	Q96HF1	295 aa		4.92	□□□□□ -1.62
PABPC4-222	ENST00000527718	FANCD2OS	Q96PS1	177 aa		4.92	□□□□□ -1.62
PABPC4-222	ENST00000527718	SLC25A2	Q9BXI2	301 aa		4.92	□□□□□ -1.62
PABPC4-222	ENST00000527718	KRTAP17-1	Q9BYP8	105 aa		4.92	□□□□□ -1.62
PABPC4-222	ENST00000527718	TMPRSS5	Q9H3S3	457 aa		4.92	□□□□□ -1.62
PABPC4-222	ENST00000527718	UFC1	Q9Y3C8	167 aa		4.92	□□□□□ -1.62
PABPC4-222	ENST00000527718	DOCK11	Q5JSL3	2073 aa		4.92	□□□□□ -1.62
PABPC4-222	ENST00000527718	PDZD2	O15018	2839 aa		4.91	□□□□□ -1.62
PABPC4-222	ENST00000527718	TRBV24-1	A0A075B6N3	115 aa		4.91	□□□□□ -1.62
PABPC4-222	ENST00000527718	TRBV6-1	A0A0K0K1D8	114 aa		4.91	□□□□□ -1.62
PABPC4-222	ENST00000527718	PSMB11	A5LHX3	300 aa		4.91	□□□□□ -1.62
PABPC4-222	ENST00000527718	PGP	A6NDG6	321 aa		4.91	□□□□□ -1.62
PABPC4-222	ENST00000527718	OR2T8	A6NH00	312 aa		4.91	□□□□□ -1.62
PABPC4-222	ENST00000527718	ZNF98	A6NK75	572 aa		4.91	□□□□□ -1.62
PABPC4-222	ENST00000527718	ZNF785	A8K8V0	405 aa		4.91	□□□□□ -1.62
PABPC4-222	ENST00000527718		C9JQL5	133 aa		4.91	□□□□□ -1.62
PABPC4-222	ENST00000527718	ISLR	O14498	428 aa		4.91	□□□□□ -1.62
PABPC4-222	ENST00000527718	SCO1	O75880	301 aa		4.91	□□□□□ -1.62
PABPC4-222	ENST00000527718	IGKV1-17	P01599	117 aa		4.91	□□□□□ -1.62
PABPC4-222	ENST00000527718	MT-ND6	P03923	174 aa		4.91	□□□□□ -1.62
PABPC4-222	ENST00000527718	OR10J4	P0C629	311 aa		4.91	□□□□□ -1.62
PABPC4-222	ENST00000527718	GATA2	P23769	480 aa	Predicted RBP	4.91	□□□□□ -1.62
PABPC4-222	ENST00000527718	GPR183	P32249	361 aa		4.91	□□□□□ -1.62
PABPC4-222	ENST00000527718	IER3	P46695	156 aa		4.91	□□□□□ -1.62
PABPC4-222	ENST00000527718	ATP5G3	P48201	142 aa		4.91	□□□□□ -1.62
PABPC4-222	ENST00000527718	MFAP2	P55001	183 aa		4.91	□□□□□ -1.62
PABPC4-222	ENST00000527718	RAN	P62826	216 aa	Known RBP	4.91	□□□□□ -1.62
PABPC4-222	ENST00000527718	RPL23	P62829	140 aa	Known RBP	4.91	□□□□□ -1.62
PABPC4-222	ENST00000527718	FOXL1	Q12952	345 aa		4.91	□□□□□ -1.62
PABPC4-222	ENST00000527718	USF2	Q15853	346 aa	Predicted RBP	4.91	□□□□□ -1.62

Retrieved 100 of 20,778 RNA–protein pairs in 193.2 ms