RNA–Protein interactions for RNA: ENST00000351948.8

SMC6-201, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,173 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-201ENST00000351948 SRSF9Q13242 221 aaKnown RBP eCLIP11.02□□□□□ -0.65
SMC6-201ENST00000351948 GATA3P23771 443 aa11.01□□□□□ -0.65
SMC6-201ENST00000351948 WT1-ASQ06250 92 aa11.01□□□□□ -0.65
SMC6-201ENST00000351948 MBD3L1Q8WWY6 194 aa11.01□□□□□ -0.65
SMC6-201ENST00000351948 TMEM14BQ9NUH8 114 aa11.01□□□□□ -0.65
SMC6-201ENST00000351948 ZNF256Q9Y2P7 627 aaPredicted RBP11.01□□□□□ -0.65
SMC6-201ENST00000351948 ITGB1BP1O14713 200 aa11.01□□□□□ -0.65
SMC6-201ENST00000351948 RPL35AP18077 110 aaKnown RBP11.01□□□□□ -0.65
SMC6-201ENST00000351948 ACTL10Q5JWF8 245 aa11.01□□□□□ -0.65
SMC6-201ENST00000351948 OR1N2Q8NGR9 330 aa11.01□□□□□ -0.65
SMC6-201ENST00000351948 ANAPC10Q9UM13 185 aa11.01□□□□□ -0.65
SMC6-201ENST00000351948 RIPPLY3P57055 190 aa11.01□□□□□ -0.65
SMC6-201ENST00000351948 PRELID3AQ96N28 172 aa11.01□□□□□ -0.65
SMC6-201ENST00000351948 KIR2DL4Q99706 377 aa11.01□□□□□ -0.65
SMC6-201ENST00000351948 TRBV7-1A0A0A6YYK4 115 aa11□□□□□ -0.65
SMC6-201ENST00000351948 LINC00479Q96M42 142 aa11□□□□□ -0.65
SMC6-201ENST00000351948 KAAG1Q9UBP8 84 aa11□□□□□ -0.65
SMC6-201ENST00000351948 IFITM10A6NMD0 228 aa11□□□□□ -0.65
SMC6-201ENST00000351948 HOXA3O43365 443 aaPredicted RBP11□□□□□ -0.65
SMC6-201ENST00000351948 KCNS1Q96KK3 526 aa11□□□□□ -0.65
SMC6-201ENST00000351948 NDUFA4L2Q9NRX3 87 aa11□□□□□ -0.65
SMC6-201ENST00000351948 SPSB3Q6PJ21 355 aa11□□□□□ -0.65
SMC6-201ENST00000351948 PEF1Q9UBV8 284 aaKnown RBP11□□□□□ -0.65
SMC6-201ENST00000351948 IGHV4-59P01825 116 aa11□□□□□ -0.65
SMC6-201ENST00000351948 MKI67P46013 3256 aaKnown RBP10.99□□□□□ -0.65
SMC6-201ENST00000351948 MUC22E2RYF6 1773 aaPredicted RBP10.99□□□□□ -0.65
SMC6-201ENST00000351948 C19orf54Q5BKX5 351 aa10.99□□□□□ -0.65
SMC6-201ENST00000351948 TMEM183AQ8IXX5 376 aa10.99□□□□□ -0.65
SMC6-201ENST00000351948 C3orf56Q8N813 242 aa10.99□□□□□ -0.65
SMC6-201ENST00000351948 TNFRSF18Q9Y5U5 241 aa10.99□□□□□ -0.65
SMC6-201ENST00000351948 C19orf84I3L1E1 186 aa10.99□□□□□ -0.65
SMC6-201ENST00000351948 PAX9P55771 341 aa10.99□□□□□ -0.65
SMC6-201ENST00000351948 DEFB112Q30KQ8 113 aa10.99□□□□□ -0.65
SMC6-201ENST00000351948 GTSCR1Q86UQ5 136 aa10.99□□□□□ -0.65
SMC6-201ENST00000351948 H3BVH4 76 aa10.99□□□□□ -0.65
SMC6-201ENST00000351948 IGHV4-38-2P0DP08 117 aa10.99□□□□□ -0.65
SMC6-201ENST00000351948 TMEM95Q3KNT9 176 aa10.99□□□□□ -0.65
SMC6-201ENST00000351948 FAM19A2Q8N3H0 131 aa10.99□□□□□ -0.65
SMC6-201ENST00000351948 FASNP49327 2511 aaKnown RBP10.99□□□□□ -0.65
SMC6-201ENST00000351948 UBE2E2Q96LR5 201 aa10.98□□□□□ -0.65
SMC6-201ENST00000351948 C7orf71A4D174 169 aa10.98□□□□□ -0.65
SMC6-201ENST00000351948 LHBP01229 141 aa10.98□□□□□ -0.65
SMC6-201ENST00000351948 USMG5Q96IX5 58 aa10.98□□□□□ -0.65
SMC6-201ENST00000351948 SETD2Q9BYW2 2564 aaPredicted RBP10.98□□□□□ -0.65
SMC6-201ENST00000351948 DEFB113Q30KQ7 82 aa10.98□□□□□ -0.65
SMC6-201ENST00000351948 KRTAP27-1Q3LI81 207 aa10.98□□□□□ -0.65
SMC6-201ENST00000351948 DEFB121Q5J5C9 76 aa10.98□□□□□ -0.65
SMC6-201ENST00000351948 A0A087X0M5 115 aa10.98□□□□□ -0.65
SMC6-201ENST00000351948 A0A1B0GX30 115 aa10.98□□□□□ -0.65
SMC6-201ENST00000351948 APOHP02749 345 aaPredicted RBP10.98□□□□□ -0.65
SMC6-201ENST00000351948 RNF182Q8N6D2 247 aa10.97□□□□□ -0.65
SMC6-201ENST00000351948 TRAV12-3A0A0B4J271 114 aa10.97□□□□□ -0.65
SMC6-201ENST00000351948 OR10AG1Q8NH19 301 aa10.97□□□□□ -0.65
SMC6-201ENST00000351948 CDC42EP3Q9UKI2 254 aa10.97□□□□□ -0.65
SMC6-201ENST00000351948 BRCA2P51587 3418 aa10.97□□□□□ -0.65
SMC6-201ENST00000351948 IGHV3-73A0A0B4J1V6 119 aa10.97□□□□□ -0.65
SMC6-201ENST00000351948 TCRAP04437 139 aa10.97□□□□□ -0.65
SMC6-201ENST00000351948 HOXB4P17483 251 aaPredicted RBP10.97□□□□□ -0.65
SMC6-201ENST00000351948 PRORYQ9H606 182 aa10.97□□□□□ -0.65
SMC6-201ENST00000351948 TNRC6AQ8NDV7 1962 aaKnown RBP10.97□□□□□ -0.65
SMC6-201ENST00000351948 TRAV21A0A0B4J279 112 aa10.97□□□□□ -0.65
SMC6-201ENST00000351948 HIST2H2BCQ6DN03 193 aa10.96□□□□□ -0.65
SMC6-201ENST00000351948 NAV3Q8IVL0 2385 aa10.96□□□□□ -0.65
SMC6-201ENST00000351948 LINC00311Q8N616 119 aa10.96□□□□□ -0.65
SMC6-201ENST00000351948 ZFP30Q9Y2G7 519 aa10.96□□□□□ -0.65
SMC6-201ENST00000351948 DUSP14O95147 198 aaKnown RBP10.96□□□□□ -0.66
SMC6-201ENST00000351948 ERCC8Q13216 396 aa10.96□□□□□ -0.66
SMC6-201ENST00000351948 DAZ1Q9NQZ3 744 aaKnown RBP10.96□□□□□ -0.66
SMC6-201ENST00000351948 EVI2AP22794 236 aa10.96□□□□□ -0.66
SMC6-201ENST00000351948 LCN12Q6JVE5 192 aa10.96□□□□□ -0.66
SMC6-201ENST00000351948 Q8NFD4 153 aa10.96□□□□□ -0.66
SMC6-201ENST00000351948 NCOR1P1Q9H4R4 102 aa10.96□□□□□ -0.66
SMC6-201ENST00000351948 TNCP24821 2201 aa10.95□□□□□ -0.66
SMC6-201ENST00000351948 FAM223BA6NKX1 122 aa10.95□□□□□ -0.66
SMC6-201ENST00000351948 TOMM40O96008 361 aa10.95□□□□□ -0.66
SMC6-201ENST00000351948 GFI1BQ5VTD9 330 aa10.95□□□□□ -0.66
SMC6-201ENST00000351948 FAM223AQ8IWN6 122 aa10.95□□□□□ -0.66
SMC6-201ENST00000351948 NUDT10Q8NFP7 164 aa10.95□□□□□ -0.66
SMC6-201ENST00000351948 FAM110DQ8TAY7 271 aaPredicted RBP10.95□□□□□ -0.66
SMC6-201ENST00000351948 NUDT11Q96G61 164 aa10.95□□□□□ -0.66
SMC6-201ENST00000351948 PRRC2CQ9Y520 2896 aaKnown RBP10.95□□□□□ -0.66
SMC6-201ENST00000351948 USP9YO00507 2555 aaPredicted RBP10.95□□□□□ -0.66
SMC6-201ENST00000351948 IZUMO1RA6ND01 250 aa10.95□□□□□ -0.66
SMC6-201ENST00000351948 PAX1P15863 534 aa10.95□□□□□ -0.66
SMC6-201ENST00000351948 TMEM249Q2WGJ8 235 aa10.95□□□□□ -0.66
SMC6-201ENST00000351948 C10orf142B7Z368 130 aa10.95□□□□□ -0.66
SMC6-201ENST00000351948 USP9XQ93008 2570 aaPredicted RBP10.95□□□□□ -0.66
SMC6-201ENST00000351948 PSMB2P49721 201 aa10.94□□□□□ -0.66
SMC6-201ENST00000351948 LAMA3Q16787 3333 aa10.94□□□□□ -0.66
SMC6-201ENST00000351948 OVOL1O14753 267 aa10.94□□□□□ -0.66
SMC6-201ENST00000351948 CD5P06127 495 aa10.94□□□□□ -0.66
SMC6-201ENST00000351948 ZFP36P26651 326 aaKnown RBP10.94□□□□□ -0.66
SMC6-201ENST00000351948 DEFB131AP59861 70 aa10.94□□□□□ -0.66
SMC6-201ENST00000351948 RNF151Q2KHN1 245 aa10.94□□□□□ -0.66
SMC6-201ENST00000351948 RITA1Q96K30 269 aa10.94□□□□□ -0.66
SMC6-201ENST00000351948 C5orf42Q9H799 3197 aa10.94□□□□□ -0.66
SMC6-201ENST00000351948 PRSS2P07478 247 aa10.94□□□□□ -0.66
SMC6-201ENST00000351948 LEPP41159 167 aa10.94□□□□□ -0.66
SMC6-201ENST00000351948 TRBV9A0A0B4J1U6 114 aa10.93□□□□□ -0.66
SMC6-201ENST00000351948 H7C2G1 150 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 119.6 ms