RNA–Protein interactions for RNA: snR43

snR43, Transcript of H/ACA box small nucleolar RNA (snoRNA), yeastyeast

Gene snR43, Length 209 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR43snR43 FPR1P20081 114 aaKnown RBP2.8□□□□□ -1.96
snR43snR43 SIR1P21691 654 aa2.8□□□□□ -1.96
snR43snR43 BAS1P22035 811 aa2.8□□□□□ -1.96
snR43snR43 PPH22P23595 377 aa2.8□□□□□ -1.96
snR43snR43 VPS3P23643 1011 aa2.8□□□□□ -1.96
snR43snR43 SYP1P25623 870 aaKnown RBP2.8□□□□□ -1.96
snR43snR43 PRR1P28708 518 aa2.8□□□□□ -1.96
snR43snR43 GPI10P30777 616 aa2.8□□□□□ -1.96
snR43snR43 RAD16P31244 790 aa2.8□□□□□ -1.96
snR43snR43 ABD1P32783 436 aaPredicted RBP2.8□□□□□ -1.96
snR43snR43 PDR3P33200 976 aa2.8□□□□□ -1.96
snR43snR43 TRM2P33753 639 aa2.8□□□□□ -1.96
snR43snR43 TSA1P34760 196 aaKnown RBP2.8□□□□□ -1.96
snR43snR43 YKR051WP36142 418 aa2.8□□□□□ -1.96
snR43snR43 OMA1P36163 345 aa2.8□□□□□ -1.96
snR43snR43 ARL1P38116 183 aaKnown RBP2.8□□□□□ -1.96
snR43snR43 SIP3P38717 1229 aa2.8□□□□□ -1.96
snR43snR43 PIH1P38768 344 aa2.8□□□□□ -1.96
snR43snR43 YHR054CP38780 354 aa2.8□□□□□ -1.96
snR43snR43 QNS1P38795 714 aaKnown RBP2.8□□□□□ -1.96
snR43snR43 BTT1P40314 149 aaPredicted RBP2.8□□□□□ -1.96
snR43snR43 THI6P41835 540 aa2.8□□□□□ -1.96
snR43snR43 CCM1P48237 864 aaPredicted RBP2.8□□□□□ -1.96
snR43snR43 RPL4BP49626 362 aaKnown RBP2.8□□□□□ -1.96
snR43snR43 ORC5P50874 479 aa2.8□□□□□ -1.96
snR43snR43 CUE3P53137 624 aaKnown RBP2.8□□□□□ -1.96
snR43snR43 NOP13P53883 403 aaKnown RBP RIP-Chip data2.8□□□□□ -1.96not detected
snR43snR43 CBK1P53894 756 aa2.8□□□□□ -1.96
snR43snR43 IMP4P53941 290 aaKnown RBP2.8□□□□□ -1.96
snR43snR43 SIW14P53965 281 aa2.8□□□□□ -1.96
snR43snR43 SNU56Q03782 492 aaKnown RBP2.8□□□□□ -1.96
snR43snR43 TIF35Q04067 274 aaKnown RBP2.8□□□□□ -1.96
snR43snR43 YLH47Q06493 454 aa2.8□□□□□ -1.96
snR43snR43 YDL057WQ07379 328 aa2.8□□□□□ -1.96
snR43snR43 RCL1Q08096 367 aaPredicted RBP2.8□□□□□ -1.96
snR43snR43 YPQ1Q12010 308 aa2.8□□□□□ -1.96
snR43snR43 SGT2Q12118 346 aaKnown RBP2.8□□□□□ -1.96
snR43snR43 GET3Q12154 354 aaKnown RBP2.8□□□□□ -1.96
snR43snR43 FOB1O13329 566 aa2.79□□□□□ -1.96
snR43snR43 SSB1P11484 613 aaKnown RBP2.79□□□□□ -1.96
snR43snR43 INO1P11986 533 aa2.79□□□□□ -1.96
snR43snR43 REV1P12689 985 aa2.79□□□□□ -1.96
snR43snR43 FRS2P15625 503 aaKnown RBP2.79□□□□□ -1.96
snR43snR43 ISY1P21374 235 aaPredicted RBP2.79□□□□□ -1.96
snR43snR43 MCM3P24279 971 aaKnown RBP2.79□□□□□ -1.96
snR43snR43 LIP5P32875 414 aa2.79□□□□□ -1.96
snR43snR43 SWE1P32944 819 aa2.79□□□□□ -1.96
snR43snR43 NNK1P36003 928 aa2.79□□□□□ -1.96
snR43snR43 KDX1P36005 433 aa2.79□□□□□ -1.96
snR43snR43 SIF2P38262 535 aa2.79□□□□□ -1.96
snR43snR43 TIF5P38431 405 aaKnown RBP2.79□□□□□ -1.96
snR43snR43 MED6P38782 295 aa2.79□□□□□ -1.96
snR43snR43 PCF11P39081 626 aaPredicted RBP2.79□□□□□ -1.96
snR43snR43 DOT6P40059 670 aaKnown RBP2.79□□□□□ -1.96
snR43snR43 SSB2P40150 613 aaKnown RBP2.79□□□□□ -1.96
snR43snR43 CHS6P40955 746 aa2.79□□□□□ -1.96
snR43snR43 GTS1P40956 396 aa2.79□□□□□ -1.96
snR43snR43 IES1P43579 692 aa2.79□□□□□ -1.96
snR43snR43 RMD8P43620 662 aa2.79□□□□□ -1.96
snR43snR43 ASN1P49089 572 aaKnown RBP2.79□□□□□ -1.96
snR43snR43 UTP8P53276 713 aaKnown RBP2.79□□□□□ -1.96
snR43snR43 SDA1P53313 767 aaKnown RBP2.79□□□□□ -1.96
snR43snR43 SEC5P89102 971 aa2.79□□□□□ -1.96
snR43snR43 CWC21Q03375 135 aaKnown RBP2.79□□□□□ -1.96
snR43snR43 HER2Q03557 464 aa2.79□□□□□ -1.96
snR43snR43 ADY4Q05955 493 aa2.79□□□□□ -1.96
snR43snR43 SHS1Q07657 551 aa2.79□□□□□ -1.96
snR43snR43 FAL1Q12099 399 aaKnown RBP2.79□□□□□ -1.96
snR43snR43 DCS2Q12123 353 aa2.79□□□□□ -1.96
snR43snR43 YVC1Q12324 675 aa2.79□□□□□ -1.96
snR43snR43 ASP3-2P0CX77 362 aa2.78□□□□□ -1.96
snR43snR43 ASP3-3P0CX78 362 aa2.78□□□□□ -1.96
snR43snR43 ASP3-4P0CX79 362 aa2.78□□□□□ -1.96
snR43snR43 ASP3-1P0CZ17 362 aa2.78□□□□□ -1.96
snR43snR43 YER152CP10356 443 aa2.78□□□□□ -1.96
snR43snR43 PFK1P16861 987 aaKnown RBP2.78□□□□□ -1.96
snR43snR43 SSD1P24276 1250 aaKnown RBP RIP-Chip data2.78□□□□□ -1.96not detected
snR43snR43 PRO1P32264 428 aa2.78□□□□□ -1.96
snR43snR43 UBP13P38187 747 aa2.78□□□□□ -1.96
snR43snR43 YHL017WP38745 532 aa2.78□□□□□ -1.96
snR43snR43 HSE1P38753 452 aa2.78□□□□□ -1.96
snR43snR43 PTC7P38797 343 aa2.78□□□□□ -1.96
snR43snR43 GGA2P38817 585 aaKnown RBP2.78□□□□□ -1.96
snR43snR43 VTC2P43585 828 aa2.78□□□□□ -1.96
snR43snR43 SCD6P45978 349 aaKnown RBP RIP-Chip data2.78□□□□□ -1.96not detected
snR43snR43 YGL176CP46945 554 aa2.78□□□□□ -1.96
snR43snR43 TYW3P53177 273 aa2.78□□□□□ -1.96
snR43snR43 RTC4P53850 401 aa2.78□□□□□ -1.96
snR43snR43 CEG1Q01159 459 aaPredicted RBP2.78□□□□□ -1.96
snR43snR43 SSY1Q03770 852 aa2.78□□□□□ -1.96
snR43snR43 CDD1Q06549 142 aa2.78□□□□□ -1.96
snR43snR43 YPL066WQ12194 479 aa2.78□□□□□ -1.96
snR43snR43 HRT3Q12347 344 aa2.78□□□□□ -1.96
snR43snR43 NDJ1Q12366 352 aa2.78□□□□□ -1.96
snR43snR43 SPO21Q12411 609 aa2.78□□□□□ -1.96
snR43snR43 TUF1P02992 437 aaKnown RBP2.77□□□□□ -1.97
snR43snR43 CLN2P20438 545 aa2.77□□□□□ -1.97
snR43snR43 MSB1P21339 1137 aaKnown RBP2.77□□□□□ -1.97
snR43snR43 KIN3P22209 435 aa2.77□□□□□ -1.97
snR43snR43 CSE1P33307 960 aa2.77□□□□□ -1.97
Retrieved 100 of 5,963 RNA–protein pairs in 14.8 ms