RNA–Protein interactions for RNA: YPR002W

PDH1, Transcript of Putative 2-methylcitrate dehydratase, yeast

Gene PDH1, Length 1,551 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PDH1	YPR002W	LGE1	Q02796	332 aa	Known RBP	5.7	□□□□□ -1.5
PDH1	YPR002W	ERV41	Q04651	352 aa		5.7	□□□□□ -1.5
PDH1	YPR002W	RRG1	Q12167	365 aa	Predicted RBP	5.7	□□□□□ -1.5
PDH1	YPR002W	TRM11	Q12463	433 aa		5.7	□□□□□ -1.5
PDH1	YPR002W	YDR461C-A	Q2V2P7	80 aa		5.7	□□□□□ -1.5
PDH1	YPR002W	PGK1	P00560	416 aa	Known RBP	5.69	□□□□□ -1.5
PDH1	YPR002W	BI2	P03873	423 aa		5.69	□□□□□ -1.5
PDH1	YPR002W	BI4	P03879	638 aa		5.69	□□□□□ -1.5
PDH1	YPR002W	RNR1	P21524	888 aa	Known RBP	5.69	□□□□□ -1.5
PDH1	YPR002W	MCM5	P29496	775 aa	Known RBP	5.69	□□□□□ -1.5
PDH1	YPR002W	SSE1	P32589	693 aa	Known RBP	5.69	□□□□□ -1.5
PDH1	YPR002W	MUD1	P32605	298 aa	Known RBP	5.69	□□□□□ -1.5
PDH1	YPR002W	PEX2	P32800	271 aa		5.69	□□□□□ -1.5
PDH1	YPR002W	CCL1	P37366	393 aa		5.69	□□□□□ -1.5
PDH1	YPR002W	PHO88	P38264	188 aa	Predicted RBP	5.69	□□□□□ -1.5
PDH1	YPR002W	BEM4	P39011	633 aa		5.69	□□□□□ -1.5
PDH1	YPR002W	CEM1	P39525	442 aa		5.69	□□□□□ -1.5
PDH1	YPR002W	YER156C	P40093	338 aa	Known RBP	5.69	□□□□□ -1.5
PDH1	YPR002W	YJL107C	P42947	387 aa		5.69	□□□□□ -1.5
PDH1	YPR002W	LIA1	P47120	325 aa	Known RBP	5.69	□□□□□ -1.5
PDH1	YPR002W	YJR107W	P47145	328 aa		5.69	□□□□□ -1.5
PDH1	YPR002W	PXR1	P53335	271 aa	Predicted RBP	5.69	□□□□□ -1.5
PDH1	YPR002W	ADE12	P80210	433 aa	Known RBP	5.69	□□□□□ -1.5
PDH1	YPR002W	HFD1	Q04458	532 aa		5.69	□□□□□ -1.5
PDH1	YPR002W	DUS4	Q06063	367 aa		5.69	□□□□□ -1.5
PDH1	YPR002W	TRE1	Q08919	783 aa		5.69	□□□□□ -1.5
PDH1	YPR002W	FAP7	Q12055	197 aa	Predicted RBP	5.69	□□□□□ -1.5
PDH1	YPR002W	BI3	Q9ZZW7	517 aa		5.69	□□□□□ -1.5
PDH1	YPR002W	CMD1	P06787	147 aa	Known RBP	5.68	□□□□□ -1.5
PDH1	YPR002W	TUB3	P09734	445 aa	Known RBP	5.68	□□□□□ -1.5
PDH1	YPR002W	AFG2	P32794	780 aa		5.68	□□□□□ -1.5
PDH1	YPR002W	MRE11	P32829	692 aa		5.68	□□□□□ -1.5
PDH1	YPR002W	CSG2	P35206	410 aa		5.68	□□□□□ -1.5
PDH1	YPR002W	YBP1	P38315	674 aa		5.68	□□□□□ -1.5
PDH1	YPR002W	PCA1	P38360	1216 aa		5.68	□□□□□ -1.5
PDH1	YPR002W	YHL008C	P38750	627 aa		5.68	□□□□□ -1.5
PDH1	YPR002W	ERC1	P38767	581 aa		5.68	□□□□□ -1.5
PDH1	YPR002W	JEM1	P40358	645 aa		5.68	□□□□□ -1.5
PDH1	YPR002W	PRK1	P40494	810 aa		5.68	□□□□□ -1.5
PDH1	YPR002W	SAE2	P46946	345 aa		5.68	□□□□□ -1.5
PDH1	YPR002W	YJL045W	P47052	634 aa		5.68	□□□□□ -1.5
PDH1	YPR002W	TAN1	P53072	289 aa	Predicted RBP	5.68	□□□□□ -1.5
PDH1	YPR002W	LIF1	P53150	421 aa		5.68	□□□□□ -1.5
PDH1	YPR002W	SOL4	P53315	255 aa		5.68	□□□□□ -1.5
PDH1	YPR002W	NOG2	P53742	486 aa	Known RBP	5.68	□□□□□ -1.5
PDH1	YPR002W	DAK1	P54838	584 aa	Known RBP	5.68	□□□□□ -1.5
PDH1	YPR002W	YKU80	Q04437	629 aa		5.68	□□□□□ -1.5
PDH1	YPR002W	RSC2	Q06488	889 aa		5.68	□□□□□ -1.5
PDH1	YPR002W	NOT5	Q12514	560 aa	Predicted RBP	5.68	□□□□□ -1.5
PDH1	YPR002W	PMA1	P05030	918 aa	Known RBP	5.67	□□□□□ -1.5
PDH1	YPR002W	IDI1	P15496	288 aa		5.67	□□□□□ -1.5
PDH1	YPR002W	KAR4	P25583	335 aa		5.67	□□□□□ -1.5
PDH1	YPR002W	TMT1	P32643	299 aa		5.67	□□□□□ -1.5
PDH1	YPR002W	COY1	P34237	679 aa		5.67	□□□□□ -1.5
PDH1	YPR002W	MSC7	P38694	644 aa		5.67	□□□□□ -1.5
PDH1	YPR002W	HOS4	P40480	1083 aa		5.67	□□□□□ -1.5
PDH1	YPR002W	CPR7	P47103	393 aa		5.67	□□□□□ -1.5
PDH1	YPR002W	PAN2	P53010	1115 aa	Predicted RBP	5.67	□□□□□ -1.5
PDH1	YPR002W	USE1	P53146	245 aa		5.67	□□□□□ -1.5
PDH1	YPR002W	COG6	P53959	839 aa		5.67	□□□□□ -1.5
PDH1	YPR002W	UBX4	P54730	416 aa		5.67	□□□□□ -1.5
PDH1	YPR002W	RPA49	Q01080	415 aa	Predicted RBP	5.67	□□□□□ -1.5
PDH1	YPR002W	YDR018C	Q12185	396 aa		5.67	□□□□□ -1.5
PDH1	YPR002W	FLP1	P03870	423 aa		5.67	□□□□□ -1.5
PDH1	YPR002W	ILS1	P09436	1072 aa	Known RBP	5.67	□□□□□ -1.5
PDH1	YPR002W	TAL1	P15019	335 aa	Known RBP	5.67	□□□□□ -1.5
PDH1	YPR002W	EXO70	P19658	623 aa		5.67	□□□□□ -1.5
PDH1	YPR002W	DBP5	P20449	482 aa	Known RBP	5.67	□□□□□ -1.5
PDH1	YPR002W	MGT1	P26188	188 aa		5.67	□□□□□ -1.5
PDH1	YPR002W	TOA1	P32773	286 aa		5.67	□□□□□ -1.5
PDH1	YPR002W	ABD1	P32783	436 aa	Predicted RBP	5.67	□□□□□ -1.5
PDH1	YPR002W	KEL1	P38853	1164 aa	Known RBP	5.67	□□□□□ -1.5
PDH1	YPR002W	STN1	P38960	494 aa		5.67	□□□□□ -1.5
PDH1	YPR002W	AIM21	P40563	679 aa		5.67	□□□□□ -1.5
PDH1	YPR002W	LYS5	P50113	272 aa		5.67	□□□□□ -1.5
PDH1	YPR002W	YML6	P51998	286 aa		5.67	□□□□□ -1.5
PDH1	YPR002W	MIG2	P53035	382 aa		5.67	□□□□□ -1.5
PDH1	YPR002W	MCM6	P53091	1017 aa	Known RBP	5.67	□□□□□ -1.5
PDH1	YPR002W	DOS2	P54858	310 aa		5.67	□□□□□ -1.5
PDH1	YPR002W	SLT2	Q00772	484 aa		5.67	□□□□□ -1.5
PDH1	YPR002W	RSA3	Q05942	220 aa	Known RBP	5.67	□□□□□ -1.5
PDH1	YPR002W	SYT1	Q06836	1226 aa		5.67	□□□□□ -1.5
PDH1	YPR002W	AI5_BETA	Q9ZZX0	354 aa		5.67	□□□□□ -1.5
PDH1	YPR002W	RPL24A	P04449	155 aa	Known RBP	5.66	□□□□□ -1.5
PDH1	YPR002W	RRT12	P25381	491 aa		5.66	□□□□□ -1.5
PDH1	YPR002W	PYC2	P32327	1180 aa	Known RBP	5.66	□□□□□ -1.5
PDH1	YPR002W	TGL1	P34163	548 aa		5.66	□□□□□ -1.5
PDH1	YPR002W	AST1	P35183	429 aa		5.66	□□□□□ -1.5
PDH1	YPR002W	MRX3	P38172	270 aa		5.66	□□□□□ -1.5
PDH1	YPR002W	TSC10	P38342	320 aa		5.66	□□□□□ -1.5
PDH1	YPR002W	MSR1	P38714	643 aa		5.66	□□□□□ -1.5
PDH1	YPR002W	SMF2	P38778	549 aa		5.66	□□□□□ -1.5
PDH1	YPR002W	NPP2	P39997	493 aa		5.66	□□□□□ -1.5
PDH1	YPR002W	TMN3	P40071	706 aa		5.66	□□□□□ -1.5
PDH1	YPR002W	SCS2	P40075	244 aa	Known RBP	5.66	□□□□□ -1.5
PDH1	YPR002W	ARG2	P40360	574 aa		5.66	□□□□□ -1.5
PDH1	YPR002W	MKT1	P40850	830 aa	Known RBP	5.66	□□□□□ -1.5
PDH1	YPR002W	PPT1	P53043	513 aa		5.66	□□□□□ -1.5
PDH1	YPR002W	NUT1	P53114	1132 aa		5.66	□□□□□ -1.5
PDH1	YPR002W	YGL039W	P53183	348 aa	Known RBP	5.66	□□□□□ -1.5

Retrieved 100 of 5,963 RNA–protein pairs in 12.1 ms