RNA–Protein interactions for RNA: YPL183W-A

RTC6, Transcript of Protein involved in translation, yeast

Gene RTC6, Length 282 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RTC6	YPL183W-A	HIS6	P40545	261 aa		2.57	□□□□□ -2
RTC6	YPL183W-A	STU2	P46675	888 aa		2.57	□□□□□ -2
RTC6	YPL183W-A	YDL183C	P48569	320 aa		2.57	□□□□□ -2
RTC6	YPL183W-A	DIP5	P53388	608 aa		2.57	□□□□□ -2
RTC6	YPL183W-A	YNR071C	P53757	342 aa		2.57	□□□□□ -2
RTC6	YPL183W-A	EFR3	Q03653	782 aa	Known RBP	2.57	□□□□□ -2
RTC6	YPL183W-A	TMN2	Q04562	672 aa		2.57	□□□□□ -2
RTC6	YPL183W-A	ARR3	Q06598	404 aa		2.57	□□□□□ -2
RTC6	YPL183W-A	CRD1	Q07560	283 aa		2.57	□□□□□ -2
RTC6	YPL183W-A	TAF3	Q12297	353 aa		2.57	□□□□□ -2
RTC6	YPL183W-A	GFA1	P14742	717 aa	Known RBP	2.56	□□□□□ -2
RTC6	YPL183W-A	YEF3	P16521	1044 aa	Known RBP	2.56	□□□□□ -2
RTC6	YPL183W-A	MSH1	P25846	959 aa		2.56	□□□□□ -2
RTC6	YPL183W-A	PRP45	P28004	379 aa	Predicted RBP	2.56	□□□□□ -2
RTC6	YPL183W-A	PTH2	P34222	208 aa		2.56	□□□□□ -2
RTC6	YPL183W-A	MTH1	P35198	433 aa		2.56	□□□□□ -2
RTC6	YPL183W-A	ELF1	P36053	145 aa		2.56	□□□□□ -2
RTC6	YPL183W-A	UBS1	P38290	277 aa		2.56	□□□□□ -2
RTC6	YPL183W-A	KSP1	P38691	1029 aa	Known RBP	2.56	□□□□□ -2
RTC6	YPL183W-A	PIH1	P38768	344 aa		2.56	□□□□□ -2
RTC6	YPL183W-A	SWD1	P39706	426 aa		2.56	□□□□□ -2
RTC6	YPL183W-A	VPS27	P40343	622 aa	Known RBP	2.56	□□□□□ -2
RTC6	YPL183W-A	QRI7	P43122	407 aa		2.56	□□□□□ -2
RTC6	YPL183W-A	ATG36	P46983	293 aa		2.56	□□□□□ -2
RTC6	YPL183W-A	GND2	P53319	492 aa		2.56	□□□□□ -2
RTC6	YPL183W-A	TEP1	P53916	434 aa		2.56	□□□□□ -2
RTC6	YPL183W-A	UBX4	P54730	416 aa		2.56	□□□□□ -2
RTC6	YPL183W-A	NGL2	Q03264	515 aa	Known RBP	2.56	□□□□□ -2
RTC6	YPL183W-A	IRC10	Q08118	586 aa		2.56	□□□□□ -2
RTC6	YPL183W-A	TGS1	Q12052	315 aa		2.56	□□□□□ -2
RTC6	YPL183W-A	RTK1	Q12100	620 aa	Predicted RBP	2.56	□□□□□ -2
RTC6	YPL183W-A	RKI1	Q12189	258 aa		2.56	□□□□□ -2
RTC6	YPL183W-A	YOL114C	Q12322	202 aa		2.56	□□□□□ -2
RTC6	YPL183W-A	RPN13	O13563	156 aa		2.55	□□□□□ -2
RTC6	YPL183W-A	URA3	P03962	267 aa		2.55	□□□□□ -2
RTC6	YPL183W-A	ADH4	P10127	382 aa		2.55	□□□□□ -2
RTC6	YPL183W-A	PHO81	P17442	1178 aa		2.55	□□□□□ -2
RTC6	YPL183W-A	CBP3	P21560	335 aa		2.55	□□□□□ -2
RTC6	YPL183W-A	VPS34	P22543	875 aa		2.55	□□□□□ -2
RTC6	YPL183W-A	ARG1	P22768	420 aa		2.55	□□□□□ -2
RTC6	YPL183W-A	PWP2	P25635	923 aa	Known RBP	2.55	□□□□□ -2
RTC6	YPL183W-A	CNE1	P27825	502 aa		2.55	□□□□□ -2
RTC6	YPL183W-A	DSS4	P32601	143 aa		2.55	□□□□□ -2
RTC6	YPL183W-A	LOT5	P34234	306 aa		2.55	□□□□□ -2
RTC6	YPL183W-A	MRPL7	P36519	292 aa		2.55	□□□□□ -2
RTC6	YPL183W-A	EHT1	P38295	451 aa		2.55	□□□□□ -2
RTC6	YPL183W-A	YHL041W	P38730	149 aa		2.55	□□□□□ -2
RTC6	YPL183W-A	CCT7	P42943	550 aa	Known RBP	2.55	□□□□□ -2
RTC6	YPL183W-A	GSM1	P42950	618 aa		2.55	□□□□□ -2
RTC6	YPL183W-A	NMA2	P53204	395 aa		2.55	□□□□□ -2
RTC6	YPL183W-A	SPC98	P53540	846 aa		2.55	□□□□□ -2
RTC6	YPL183W-A	CEG1	Q01159	459 aa	Predicted RBP	2.55	□□□□□ -2
RTC6	YPL183W-A	TIM50	Q02776	476 aa		2.55	□□□□□ -2
RTC6	YPL183W-A	USA1	Q03714	838 aa		2.55	□□□□□ -2
RTC6	YPL183W-A	YDL073W	Q07454	984 aa		2.55	□□□□□ -2
RTC6	YPL183W-A	YPL216W	Q08964	1102 aa		2.55	□□□□□ -2
RTC6	YPL183W-A	MRH1	Q12117	320 aa	Predicted RBP	2.55	□□□□□ -2
RTC6	YPL183W-A	DBP10	Q12389	995 aa	Known RBP	2.55	□□□□□ -2
RTC6	YPL183W-A	LAM4	P38800	1345 aa		2.54	□□□□□ -2
RTC6	YPL183W-A	MSS18	P08593	268 aa		2.54	□□□□□ -2
RTC6	YPL183W-A	PCK1	P10963	549 aa		2.54	□□□□□ -2
RTC6	YPL183W-A	PGI1	P12709	554 aa	Known RBP	2.54	□□□□□ -2
RTC6	YPL183W-A	DPB3	P27344	201 aa		2.54	□□□□□ -2
RTC6	YPL183W-A	VPS24	P36095	224 aa	Known RBP	2.54	□□□□□ -2
RTC6	YPL183W-A	CCL1	P37366	393 aa		2.54	□□□□□ -2
RTC6	YPL183W-A	ACA1	P39970	489 aa		2.54	□□□□□ -2
RTC6	YPL183W-A	VFA1	P40080	203 aa		2.54	□□□□□ -2
RTC6	YPL183W-A	RAD26	P40352	1085 aa		2.54	□□□□□ -2
RTC6	YPL183W-A	YIL166C	P40445	542 aa		2.54	□□□□□ -2
RTC6	YPL183W-A	FAF1	P40546	346 aa	Predicted RBP	2.54	□□□□□ -2
RTC6	YPL183W-A	PMT6	P42934	759 aa		2.54	□□□□□ -2
RTC6	YPL183W-A	QRI1	P43123	477 aa	Known RBP	2.54	□□□□□ -2
RTC6	YPL183W-A	VPS73	P53142	486 aa	Known RBP	2.54	□□□□□ -2
RTC6	YPL183W-A	SNF12	P53628	566 aa		2.54	□□□□□ -2
RTC6	YPL183W-A	MFM1	Q02783	413 aa		2.54	□□□□□ -2
RTC6	YPL183W-A	GFD1	Q04839	188 aa	Known RBP	2.54	□□□□□ -2
RTC6	YPL183W-A	BRE1	Q07457	700 aa	Known RBP	2.54	□□□□□ -2
RTC6	YPL183W-A	AAD4	Q07747	329 aa		2.54	□□□□□ -2
RTC6	YPL183W-A	PSR2	Q07949	397 aa		2.54	□□□□□ -2
RTC6	YPL183W-A	MSL5	Q12186	476 aa	Known RBP RIP-Chip data	2.54	□□□□□ -2	not detected
RTC6	YPL183W-A	CTT1	P06115	562 aa		2.53	□□□□□ -2
RTC6	YPL183W-A	PIF1	P07271	859 aa		2.53	□□□□□ -2
RTC6	YPL183W-A	MIS1	P09440	975 aa	Known RBP	2.53	□□□□□ -2
RTC6	YPL183W-A	STE4	P18851	423 aa		2.53	□□□□□ -2
RTC6	YPL183W-A	BET2	P20133	325 aa		2.53	□□□□□ -2
RTC6	YPL183W-A	ILV6	P25605	309 aa	Known RBP	2.53	□□□□□ -2
RTC6	YPL183W-A	YMC2	P38087	329 aa		2.53	□□□□□ -2
RTC6	YPL183W-A	COS12	P53053	380 aa		2.53	□□□□□ -2
RTC6	YPL183W-A	YIP4	P53093	235 aa		2.53	□□□□□ -2
RTC6	YPL183W-A	BUD17	P53727	317 aa		2.53	□□□□□ -2
RTC6	YPL183W-A	APM1	Q00776	475 aa	Predicted RBP	2.53	□□□□□ -2
RTC6	YPL183W-A	ATG16	Q03818	150 aa		2.53	□□□□□ -2
RTC6	YPL183W-A	VPS64	Q03944	604 aa		2.53	□□□□□ -2
RTC6	YPL183W-A	YDR179W-A	Q03983	463 aa		2.53	□□□□□ -2
RTC6	YPL183W-A	EIS1	Q05050	843 aa	Known RBP	2.53	□□□□□ -2
RTC6	YPL183W-A	ENT2	Q05785	613 aa		2.53	□□□□□ -2
RTC6	YPL183W-A	MDM20	Q12387	796 aa	Known RBP	2.53	□□□□□ -2
RTC6	YPL183W-A	PHO5	P00635	467 aa		2.52	□□□□□ -2.01
RTC6	YPL183W-A	AAC1	P04710	309 aa		2.52	□□□□□ -2.01
RTC6	YPL183W-A	WHI2	P12611	486 aa		2.52	□□□□□ -2.01

Retrieved 100 of 5,963 RNA–protein pairs in 33.5 ms