RNA–Protein interactions for RNA: YPL056C

LCL1, Transcript of Putative protein of unknown function, yeast

Gene LCL1, Length 306 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LCL1	YPL056C	BAP2	P38084	609 aa		2.73	□□□□□ -1.97
LCL1	YPL056C	RDH54	P38086	958 aa		2.73	□□□□□ -1.97
LCL1	YPL056C	MAK5	P38112	773 aa	Predicted RBP	2.73	□□□□□ -1.97
LCL1	YPL056C	ECM31	P38122	312 aa		2.73	□□□□□ -1.97
LCL1	YPL056C	RFS1	P38234	210 aa	Known RBP	2.73	□□□□□ -1.97
LCL1	YPL056C	TDP1	P38319	544 aa		2.73	□□□□□ -1.97
LCL1	YPL056C	SWC5	P38326	303 aa		2.73	□□□□□ -1.97
LCL1	YPL056C	RCK2	P38623	610 aa		2.73	□□□□□ -1.97
LCL1	YPL056C	YHI9	P38765	294 aa		2.73	□□□□□ -1.97
LCL1	YPL056C	SMC2	P38989	1170 aa	Known RBP	2.73	□□□□□ -1.97
LCL1	YPL056C	DSS1	P39112	969 aa		2.73	□□□□□ -1.97
LCL1	YPL056C	DDI1	P40087	428 aa		2.73	□□□□□ -1.97
LCL1	YPL056C	YIR007W	P40566	764 aa		2.73	□□□□□ -1.97
LCL1	YPL056C	YNL320W	P42840	284 aa		2.73	□□□□□ -1.97
LCL1	YPL056C	ELP2	P42935	788 aa		2.73	□□□□□ -1.97
LCL1	YPL056C	YJL049W	P47048	450 aa		2.73	□□□□□ -1.97
LCL1	YPL056C	ENT3	P47160	408 aa		2.73	□□□□□ -1.97
LCL1	YPL056C	MIG2	P53035	382 aa		2.73	□□□□□ -1.97
LCL1	YPL056C	VAC7	P53950	1165 aa		2.73	□□□□□ -1.97
LCL1	YPL056C	PRO2	P54885	456 aa	Known RBP	2.73	□□□□□ -1.97
LCL1	YPL056C	SLT2	Q00772	484 aa		2.73	□□□□□ -1.97
LCL1	YPL056C	RPT6	Q01939	405 aa	Known RBP	2.73	□□□□□ -1.97
LCL1	YPL056C	LGE1	Q02796	332 aa	Known RBP	2.73	□□□□□ -1.97
LCL1	YPL056C	SRT1	Q03175	343 aa		2.73	□□□□□ -1.97
LCL1	YPL056C	RRP17	Q04031	235 aa	Predicted RBP	2.73	□□□□□ -1.97
LCL1	YPL056C	URH1	Q04179	340 aa		2.73	□□□□□ -1.97
LCL1	YPL056C	RNH1	Q04740	348 aa		2.73	□□□□□ -1.97
LCL1	YPL056C	GFD1	Q04839	188 aa	Known RBP	2.73	□□□□□ -1.97
LCL1	YPL056C	DBP9	Q06218	594 aa	Known RBP	2.73	□□□□□ -1.97
LCL1	YPL056C	MLC2	Q06580	163 aa		2.73	□□□□□ -1.97
LCL1	YPL056C	ISA1	Q07821	250 aa	Predicted RBP	2.73	□□□□□ -1.97
LCL1	YPL056C	TUM1	Q08686	304 aa	Known RBP	2.73	□□□□□ -1.97
LCL1	YPL056C	NYV1	Q12255	253 aa		2.73	□□□□□ -1.97
LCL1	YPL056C	NSI1	Q12457	570 aa		2.73	□□□□□ -1.97
LCL1	YPL056C	YOR111W	Q99210	232 aa		2.73	□□□□□ -1.97
LCL1	YPL056C	ATP6	P00854	259 aa		2.72	□□□□□ -1.97
LCL1	YPL056C	CHO2	P05374	869 aa	Known RBP	2.72	□□□□□ -1.97
LCL1	YPL056C	RPL6B	P05739	176 aa	Known RBP	2.72	□□□□□ -1.97
LCL1	YPL056C	SIR3	P06701	978 aa		2.72	□□□□□ -1.97
LCL1	YPL056C	RPS6A	P0CX37	236 aa	Known RBP	2.72	□□□□□ -1.97
LCL1	YPL056C	RPS6B	P0CX38	236 aa	Predicted RBP	2.72	□□□□□ -1.97
LCL1	YPL056C	MATALPHA2	P0CY08	210 aa		2.72	□□□□□ -1.97
LCL1	YPL056C	HMLALPHA2	P0CY09	210 aa		2.72	□□□□□ -1.97
LCL1	YPL056C	CDC24	P11433	854 aa	Predicted RBP	2.72	□□□□□ -1.97
LCL1	YPL056C	PGI1	P12709	554 aa	Known RBP	2.72	□□□□□ -1.97
LCL1	YPL056C	STE12	P13574	688 aa		2.72	□□□□□ -1.97
LCL1	YPL056C	GFA1	P14742	717 aa	Known RBP	2.72	□□□□□ -1.97
LCL1	YPL056C	SPO12	P17123	173 aa		2.72	□□□□□ -1.97
LCL1	YPL056C	SEC18	P18759	758 aa	Known RBP	2.72	□□□□□ -1.97
LCL1	YPL056C	RDS2	P19541	446 aa	Known RBP	2.72	□□□□□ -1.97
LCL1	YPL056C	HXT2	P23585	541 aa		2.72	□□□□□ -1.97
LCL1	YPL056C	MCM3	P24279	971 aa	Known RBP	2.72	□□□□□ -1.97
LCL1	YPL056C	CPR3	P25719	182 aa		2.72	□□□□□ -1.97
LCL1	YPL056C	KRE2	P27809	442 aa		2.72	□□□□□ -1.97
LCL1	YPL056C	ZIP1	P31111	875 aa		2.72	□□□□□ -1.97
LCL1	YPL056C	FRD1	P32614	470 aa	Known RBP	2.72	□□□□□ -1.97
LCL1	YPL056C	YBL010C	P32788	280 aa		2.72	□□□□□ -1.97
LCL1	YPL056C	TYE7	P33122	291 aa	Predicted RBP	2.72	□□□□□ -1.97
LCL1	YPL056C	RPT5	P33297	434 aa	Known RBP	2.72	□□□□□ -1.97
LCL1	YPL056C	DOM34	P33309	386 aa		2.72	□□□□□ -1.97
LCL1	YPL056C	YKL050C	P35736	922 aa		2.72	□□□□□ -1.97
LCL1	YPL056C	UBP11	P36026	717 aa		2.72	□□□□□ -1.97
LCL1	YPL056C	YKR078W	P36158	585 aa	Known RBP	2.72	□□□□□ -1.97
LCL1	YPL056C	PPS1	P38148	807 aa		2.72	□□□□□ -1.97
LCL1	YPL056C	RFC3	P38629	340 aa		2.72	□□□□□ -1.97
LCL1	YPL056C	ERP5	P38819	212 aa		2.72	□□□□□ -1.97
LCL1	YPL056C	MTG2	P38860	518 aa		2.72	□□□□□ -1.97
LCL1	YPL056C	SEC31	P38968	1273 aa	Known RBP	2.72	□□□□□ -1.97
LCL1	YPL056C	RCY1	P39531	840 aa		2.72	□□□□□ -1.97
LCL1	YPL056C	BOL3	P39724	118 aa		2.72	□□□□□ -1.97
LCL1	YPL056C	EDC3	P39998	551 aa	Known RBP	2.72	□□□□□ -1.97
LCL1	YPL056C	MXR1	P40029	184 aa		2.72	□□□□□ -1.97
LCL1	YPL056C	IES5	P40060	125 aa		2.72	□□□□□ -1.97
LCL1	YPL056C	RTT105	P40063	208 aa		2.72	□□□□□ -1.97
LCL1	YPL056C	YIL077C	P40508	320 aa		2.72	□□□□□ -1.97
LCL1	YPL056C	BUB1	P41695	1021 aa	Known RBP RIP-Chip data	2.72	□□□□□ -1.97	not detected
LCL1	YPL056C	TIM54	P47045	478 aa		2.72	□□□□□ -1.97
LCL1	YPL056C	NAS6	P50086	228 aa		2.72	□□□□□ -1.97
LCL1	YPL056C	MAL11	P53048	616 aa		2.72	□□□□□ -1.97
LCL1	YPL056C	ZIP2	P53061	704 aa		2.72	□□□□□ -1.97
LCL1	YPL056C	YGR122W	P53272	402 aa		2.72	□□□□□ -1.97
LCL1	YPL056C	MRPL50	P53724	139 aa		2.72	□□□□□ -1.97
LCL1	YPL056C	ZRG17	P53735	605 aa		2.72	□□□□□ -1.97
LCL1	YPL056C	GOR1	P53839	350 aa		2.72	□□□□□ -1.97
LCL1	YPL056C	IMP4	P53941	290 aa	Known RBP	2.72	□□□□□ -1.97
LCL1	YPL056C	ALD6	P54115	500 aa	Known RBP	2.72	□□□□□ -1.97
LCL1	YPL056C	OSH6	Q02201	448 aa		2.72	□□□□□ -1.97
LCL1	YPL056C	YPL034W	Q03083	165 aa		2.72	□□□□□ -1.97
LCL1	YPL056C	RPN4	Q03465	531 aa		2.72	□□□□□ -1.97
LCL1	YPL056C	NSE5	Q03718	556 aa		2.72	□□□□□ -1.97
LCL1	YPL056C	YDR239C	Q03780	787 aa		2.72	□□□□□ -1.97
LCL1	YPL056C	RPN9	Q04062	393 aa	Known RBP	2.72	□□□□□ -1.97
LCL1	YPL056C	SMP3	Q04174	516 aa		2.72	□□□□□ -1.97
LCL1	YPL056C	UTP5	Q04177	643 aa	Known RBP	2.72	□□□□□ -1.97
LCL1	YPL056C	BUD22	Q04347	519 aa	Known RBP	2.72	□□□□□ -1.97
LCL1	YPL056C	HCR1	Q05775	265 aa	Known RBP	2.72	□□□□□ -1.97
LCL1	YPL056C	YLR407W	Q06070	228 aa		2.72	□□□□□ -1.97
LCL1	YPL056C	TOS4	Q06266	489 aa		2.72	□□□□□ -1.97
LCL1	YPL056C	EAF1	Q06337	982 aa		2.72	□□□□□ -1.97
LCL1	YPL056C	HIM1	Q06674	414 aa		2.72	□□□□□ -1.97

Retrieved 100 of 5,963 RNA–protein pairs in 58.2 ms