RNA–Protein interactions for RNA: YPL018W

CTF19, Transcript of Outer kinetochore protein, needed for accurate chromosome segregation, yeastyeast

Gene CTF19, Length 1,110 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTF19YPL018W SLG1P54867 378 aa6.75□□□□□ -1.33
CTF19YPL018W RKM2Q03942 479 aa6.75□□□□□ -1.33
CTF19YPL018W UFO1Q04511 668 aa6.75□□□□□ -1.33
CTF19YPL018W POB3Q04636 552 aaKnown RBP6.75□□□□□ -1.33
CTF19YPL018W SFI1Q12369 946 aa6.75□□□□□ -1.33
CTF19YPL018W NOP14Q99207 810 aaKnown RBP6.75□□□□□ -1.33
CTF19YPL018W PMS1P14242 873 aa6.74□□□□□ -1.33
CTF19YPL018W POL3P15436 1097 aa6.74□□□□□ -1.33
CTF19YPL018W MET4P32389 672 aa6.74□□□□□ -1.33
CTF19YPL018W TOM20P35180 183 aa6.74□□□□□ -1.33
CTF19YPL018W YBR053CP38235 358 aa6.74□□□□□ -1.33
CTF19YPL018W SIF2P38262 535 aa6.74□□□□□ -1.33
CTF19YPL018W SWC5P38326 303 aa6.74□□□□□ -1.33
CTF19YPL018W LYS9P38999 446 aa6.74□□□□□ -1.33
CTF19YPL018W CCT4P39078 528 aaKnown RBP6.74□□□□□ -1.33
CTF19YPL018W MAD1P40957 749 aa6.74□□□□□ -1.33
CTF19YPL018W GUF1P46943 645 aa6.74□□□□□ -1.33
CTF19YPL018W YGR283CP53336 341 aaPredicted RBP6.74□□□□□ -1.33
CTF19YPL018W URH1Q04179 340 aa6.74□□□□□ -1.33
CTF19YPL018W RRB1Q04225 511 aaKnown RBP6.74□□□□□ -1.33
CTF19YPL018W ECI1Q05871 280 aa6.74□□□□□ -1.33
CTF19YPL018W AIM41Q12032 185 aa6.74□□□□□ -1.33
CTF19YPL018W GAL11P19659 1081 aa6.73□□□□□ -1.33
CTF19YPL018W STE11P23561 717 aa6.73□□□□□ -1.33
CTF19YPL018W PEX1P24004 1043 aa6.73□□□□□ -1.33
CTF19YPL018W HEM3P28789 327 aa6.73□□□□□ -1.33
CTF19YPL018W SAK1P38990 1142 aa6.73□□□□□ -1.33
CTF19YPL018W RRN7P40992 514 aa6.73□□□□□ -1.33
CTF19YPL018W YML6P51998 286 aa6.73□□□□□ -1.33
CTF19YPL018W MAL13P53338 473 aa6.73□□□□□ -1.33
CTF19YPL018W YNL040WP53960 456 aaPredicted RBP6.73□□□□□ -1.33
CTF19YPL018W CDC55Q00362 526 aa6.73□□□□□ -1.33
CTF19YPL018W GCN5Q03330 439 aa6.73□□□□□ -1.33
CTF19YPL018W HRD3Q05787 833 aa6.73□□□□□ -1.33
CTF19YPL018W THI21Q08975 551 aa6.73□□□□□ -1.33
CTF19YPL018W ARP7Q12406 477 aa6.73□□□□□ -1.33
CTF19YPL018W PAB1P04147 577 aaKnown RBP RIP-Chip data6.72□□□□□ -1.33not detected
CTF19YPL018W SPE1P08432 466 aa6.72□□□□□ -1.33
CTF19YPL018W TUB3P09734 445 aaKnown RBP6.72□□□□□ -1.33
CTF19YPL018W YPK1P12688 680 aaKnown RBP6.72□□□□□ -1.33
CTF19YPL018W PEP7P32609 515 aa6.72□□□□□ -1.33
CTF19YPL018W TSA1P34760 196 aaKnown RBP6.72□□□□□ -1.33
CTF19YPL018W NMD3P38861 518 aaKnown RBP6.72□□□□□ -1.33
CTF19YPL018W END3P39013 349 aa6.72□□□□□ -1.33
CTF19YPL018W PRP31P49704 494 aaPredicted RBP6.72□□□□□ -1.33
CTF19YPL018W YNL247WP53852 767 aaKnown RBP6.72□□□□□ -1.33
CTF19YPL018W YNL108CP53929 270 aa6.72□□□□□ -1.33
CTF19YPL018W CEG1Q01159 459 aaPredicted RBP6.72□□□□□ -1.33
CTF19YPL018W INA17Q02888 182 aa6.72□□□□□ -1.33
CTF19YPL018W HER2Q03557 464 aa6.72□□□□□ -1.33
CTF19YPL018W VTI1Q04338 217 aa6.72□□□□□ -1.33
CTF19YPL018W SPG3Q04398 127 aaPredicted RBP6.72□□□□□ -1.33
CTF19YPL018W FMP25Q08023 583 aa6.72□□□□□ -1.33
CTF19YPL018W CIR2Q08822 631 aa6.72□□□□□ -1.33
CTF19YPL018W VPS13Q07878 3144 aa6.71□□□□□ -1.34
CTF19YPL018W CAP1P28495 268 aaKnown RBP6.71□□□□□ -1.34
CTF19YPL018W MEI4P29467 408 aa6.71□□□□□ -1.34
CTF19YPL018W SYN8P31377 255 aa6.71□□□□□ -1.34
CTF19YPL018W DAL1P32375 460 aa6.71□□□□□ -1.34
CTF19YPL018W SPT16P32558 1035 aaKnown RBP6.71□□□□□ -1.34
CTF19YPL018W BCK2P33306 851 aa6.71□□□□□ -1.34
CTF19YPL018W CNS1P33313 385 aa6.71□□□□□ -1.34
CTF19YPL018W DEF1P35732 738 aaKnown RBP6.71□□□□□ -1.34
CTF19YPL018W OLA1P38219 394 aaKnown RBP6.71□□□□□ -1.34
CTF19YPL018W YBR225WP38321 900 aa6.71□□□□□ -1.34
CTF19YPL018W PCA1P38360 1216 aa6.71□□□□□ -1.34
CTF19YPL018W TIF5P38431 405 aaKnown RBP6.71□□□□□ -1.34
CTF19YPL018W FHL1P39521 936 aa6.71□□□□□ -1.34
CTF19YPL018W PRK1P40494 810 aa6.71□□□□□ -1.34
CTF19YPL018W BFA1P47113 574 aa6.71□□□□□ -1.34
CTF19YPL018W RPA14P50106 137 aa6.71□□□□□ -1.34
CTF19YPL018W YNL034WP53963 612 aa6.71□□□□□ -1.34
CTF19YPL018W YNL018CP53976 612 aa6.71□□□□□ -1.34
CTF19YPL018W BET4Q00618 327 aa6.71□□□□□ -1.34
CTF19YPL018W YPL062WQ02781 134 aa6.71□□□□□ -1.34
CTF19YPL018W ECM22Q05958 814 aaPredicted RBP6.71□□□□□ -1.34
CTF19YPL018W THI7Q05998 598 aa6.71□□□□□ -1.34
CTF19YPL018W KAP95Q06142 861 aaKnown RBP6.71□□□□□ -1.34
CTF19YPL018W ATG23Q06671 453 aa6.71□□□□□ -1.34
CTF19YPL018W AAD4Q07747 329 aa6.71□□□□□ -1.34
CTF19YPL018W APL5Q08951 932 aaKnown RBP6.71□□□□□ -1.34
CTF19YPL018W NHA1Q99271 985 aa6.71□□□□□ -1.34
CTF19YPL018W SLY1P22213 666 aa6.7□□□□□ -1.34
CTF19YPL018W DSS4P32601 143 aa6.7□□□□□ -1.34
CTF19YPL018W GCG1P32656 232 aaKnown RBP6.7□□□□□ -1.34
CTF19YPL018W UBC6P33296 250 aaPredicted RBP6.7□□□□□ -1.34
CTF19YPL018W RRP1P35178 278 aaPredicted RBP6.7□□□□□ -1.34
CTF19YPL018W VRP1P37370 817 aa6.7□□□□□ -1.34
CTF19YPL018W PBP2P38151 413 aaKnown RBP RIP-Chip data6.7□□□□□ -1.34not detected
CTF19YPL018W STB5P38699 743 aa6.7□□□□□ -1.34
CTF19YPL018W RIM4P38741 713 aa6.7□□□□□ -1.34
CTF19YPL018W ERP2P39704 215 aa6.7□□□□□ -1.34
CTF19YPL018W BTT1P40314 149 aaPredicted RBP6.7□□□□□ -1.34
CTF19YPL018W RIM8P53179 542 aa6.7□□□□□ -1.34
CTF19YPL018W PEX31P53203 462 aa6.7□□□□□ -1.34
CTF19YPL018W UTP8P53276 713 aaKnown RBP6.7□□□□□ -1.34
CTF19YPL018W COP1P53622 1201 aaKnown RBP6.7□□□□□ -1.34
CTF19YPL018W KTR6P54070 446 aa6.7□□□□□ -1.34
CTF19YPL018W YVH1Q02256 364 aaKnown RBP6.7□□□□□ -1.34
CTF19YPL018W UTP6Q02354 440 aaKnown RBP6.7□□□□□ -1.34
Retrieved 100 of 5,963 RNA–protein pairs in 20.1 ms