RNA–Protein interactions for RNA: YOL090W

MSH2, Transcript of Protein that binds to DNA mismatches, yeastyeast

Gene MSH2, Length 2,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSH2YOL090W LCB2P40970 561 aa3.38□□□□□ -1.87
MSH2YOL090W MRX6P48564 524 aa3.38□□□□□ -1.87
MSH2YOL090W DUO1P53168 247 aaKnown RBP3.38□□□□□ -1.87
MSH2YOL090W YPL107WQ02873 248 aa3.38□□□□□ -1.87
MSH2YOL090W YML119WQ03208 357 aa3.38□□□□□ -1.87
MSH2YOL090W RPC40P07703 335 aaKnown RBP3.38□□□□□ -1.87
MSH2YOL090W YCK2P23292 546 aaKnown RBP3.38□□□□□ -1.87
MSH2YOL090W NAR1P23503 491 aaKnown RBP3.38□□□□□ -1.87
MSH2YOL090W STE50P25344 346 aa3.38□□□□□ -1.87
MSH2YOL090W SED4P25365 1065 aa3.38□□□□□ -1.87
MSH2YOL090W RPT3P33298 428 aaKnown RBP3.38□□□□□ -1.87
MSH2YOL090W CNS1P33313 385 aa3.38□□□□□ -1.87
MSH2YOL090W ARL1P38116 183 aaKnown RBP3.38□□□□□ -1.87
MSH2YOL090W GND1P38720 489 aaKnown RBP3.38□□□□□ -1.87
MSH2YOL090W GIC1P38785 314 aa3.38□□□□□ -1.87
MSH2YOL090W PCL7P40186 285 aa3.38□□□□□ -1.87
MSH2YOL090W YJR039WP47107 1121 aa3.38□□□□□ -1.87
MSH2YOL090W PSP1P50896 841 aaKnown RBP3.38□□□□□ -1.87
MSH2YOL090W SFB2P53953 876 aa3.38□□□□□ -1.87
MSH2YOL090W PEX25Q02969 394 aa3.38□□□□□ -1.87
MSH2YOL090W NGL3Q03210 505 aa3.38□□□□□ -1.87
MSH2YOL090W RMT2Q03305 412 aa3.38□□□□□ -1.87
MSH2YOL090W YLR407WQ06070 228 aa3.38□□□□□ -1.87
MSH2YOL090W RPN7Q06103 429 aaKnown RBP3.38□□□□□ -1.87
MSH2YOL090W FRE6Q12473 712 aa3.38□□□□□ -1.87
MSH2YOL090W ISN1Q99312 450 aa3.38□□□□□ -1.87
MSH2YOL090W NUP157P40064 1391 aaKnown RBP3.38□□□□□ -1.87
MSH2YOL090W STF1P01098 86 aa3.37□□□□□ -1.87
MSH2YOL090W ADE3P07245 946 aaKnown RBP3.37□□□□□ -1.87
MSH2YOL090W SIR1P21691 654 aa3.37□□□□□ -1.87
MSH2YOL090W SAC6P32599 642 aaKnown RBP3.37□□□□□ -1.87
MSH2YOL090W FRD1P32614 470 aaKnown RBP3.37□□□□□ -1.87
MSH2YOL090W GCS1P35197 352 aa3.37□□□□□ -1.87
MSH2YOL090W YKR078WP36158 585 aaKnown RBP3.37□□□□□ -1.87
MSH2YOL090W UGA2P38067 497 aa3.37□□□□□ -1.87
MSH2YOL090W PSD1P39006 500 aa3.37□□□□□ -1.87
MSH2YOL090W BEM4P39011 633 aa3.37□□□□□ -1.87
MSH2YOL090W ACO2P39533 789 aa3.37□□□□□ -1.87
MSH2YOL090W SAP4P53036 818 aa3.37□□□□□ -1.87
MSH2YOL090W YNR071CP53757 342 aa3.37□□□□□ -1.87
MSH2YOL090W SEC5P89102 971 aa3.37□□□□□ -1.87
MSH2YOL090W YSA1Q01976 231 aa3.37□□□□□ -1.87
MSH2YOL090W MEC3Q02574 474 aa3.37□□□□□ -1.87
MSH2YOL090W IWR1Q07532 353 aaPredicted RBP3.37□□□□□ -1.87
MSH2YOL090W MDM38Q08179 573 aa3.37□□□□□ -1.87
MSH2YOL090W YPL260WQ08977 551 aa3.37□□□□□ -1.87
MSH2YOL090W ACM1Q08981 209 aa3.37□□□□□ -1.87
MSH2YOL090W PDH1Q12428 516 aaKnown RBP3.37□□□□□ -1.87
MSH2YOL090W GRX6Q12438 231 aa3.37□□□□□ -1.87
MSH2YOL090W ERS1P17261 260 aa3.37□□□□□ -1.87
MSH2YOL090W NFS1P25374 497 aa3.37□□□□□ -1.87
MSH2YOL090W RIB7P33312 244 aa3.37□□□□□ -1.87
MSH2YOL090W SDS22P36047 338 aa3.37□□□□□ -1.87
MSH2YOL090W QNS1P38795 714 aaKnown RBP3.37□□□□□ -1.87
MSH2YOL090W PIK1P39104 1066 aa3.37□□□□□ -1.87
MSH2YOL090W RTT105P40063 208 aa3.37□□□□□ -1.87
MSH2YOL090W NOP9P47077 666 aaKnown RBP3.37□□□□□ -1.87
MSH2YOL090W MNT2P53059 558 aa3.37□□□□□ -1.87
MSH2YOL090W RAD33Q04231 177 aa3.37□□□□□ -1.87
MSH2YOL090W SWA2Q06677 668 aa3.37□□□□□ -1.87
MSH2YOL090W ALG6Q12001 544 aaKnown RBP3.37□□□□□ -1.87
MSH2YOL090W TGL5Q12043 749 aa3.37□□□□□ -1.87
MSH2YOL090W ISA2Q12425 185 aa3.37□□□□□ -1.87
MSH2YOL090W FTH1P38310 465 aa3.37□□□□□ -1.87
MSH2YOL090W YAR028WP39548 234 aa3.37□□□□□ -1.87
MSH2YOL090W YER158CP40095 573 aa3.37□□□□□ -1.87
MSH2YOL090W YFL052WP43551 465 aa3.37□□□□□ -1.87
MSH2YOL090W FYV8P46949 817 aaKnown RBP3.37□□□□□ -1.87
MSH2YOL090W PSP2P50109 593 aaKnown RBP3.37□□□□□ -1.87
MSH2YOL090W HFM1P51979 1187 aa3.37□□□□□ -1.87
MSH2YOL090W DSD1P53095 428 aa3.37□□□□□ -1.87
MSH2YOL090W YNR061CP53747 219 aa3.37□□□□□ -1.87
MSH2YOL090W BSC5P53755 489 aa3.37□□□□□ -1.87
MSH2YOL090W VPS9P54787 451 aa3.37□□□□□ -1.87
MSH2YOL090W OAZ1Q02803 292 aa3.37□□□□□ -1.87
MSH2YOL090W SRT1Q03175 343 aa3.37□□□□□ -1.87
MSH2YOL090W ERB1Q04660 807 aaKnown RBP3.37□□□□□ -1.87
MSH2YOL090W CRR1Q05790 422 aa3.37□□□□□ -1.87
MSH2YOL090W ECM22Q05958 814 aaPredicted RBP3.37□□□□□ -1.87
MSH2YOL090W YPS7Q06325 596 aa3.37□□□□□ -1.87
MSH2YOL090W RSC2Q06488 889 aa3.37□□□□□ -1.87
MSH2YOL090W YLH47Q06493 454 aa3.37□□□□□ -1.87
MSH2YOL090W NSI1Q12457 570 aa3.37□□□□□ -1.87
MSH2YOL090W NOP58Q12499 511 aaKnown RBP3.37□□□□□ -1.87
MSH2YOL090W GCN4P03069 281 aa3.36□□□□□ -1.87
MSH2YOL090W PUP2P32379 260 aa3.36□□□□□ -1.87
MSH2YOL090W RTS1P38903 757 aa3.36□□□□□ -1.87
MSH2YOL090W YEL057CP39983 233 aa3.36□□□□□ -1.87
MSH2YOL090W YEL025CP39991 1188 aa3.36□□□□□ -1.87
MSH2YOL090W KHA1P40309 873 aa3.36□□□□□ -1.87
MSH2YOL090W YNR068CP53754 272 aa3.36□□□□□ -1.87
MSH2YOL090W HDA1P53973 706 aa3.36□□□□□ -1.87
MSH2YOL090W PRO2P54885 456 aaKnown RBP3.36□□□□□ -1.87
MSH2YOL090W UBP2Q01476 1272 aa3.36□□□□□ -1.87
MSH2YOL090W FDC1Q03034 503 aa3.36□□□□□ -1.87
MSH2YOL090W AIM32Q04689 311 aa3.36□□□□□ -1.87
MSH2YOL090W YDR461C-AQ2V2P7 80 aa3.36□□□□□ -1.87
MSH2YOL090W RAD51P25454 400 aa3.36□□□□□ -1.87
MSH2YOL090W SWC3P31376 625 aa3.36□□□□□ -1.87
MSH2YOL090W MAC1P35192 417 aa3.36□□□□□ -1.87
Retrieved 100 of 5,963 RNA–protein pairs in 11.3 ms