RNA–Protein interactions for RNA: YNL293W

MSB3, Transcript of Rab GTPase-activating protein, yeast

Gene MSB3, Length 1,902 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MSB3	YNL293W	INP51	P40559	946 aa	Known RBP	7.33	□□□□□ -1.24
MSB3	YNL293W	ACF4	P47129	309 aa		7.33	□□□□□ -1.24
MSB3	YNL293W	ERG5	P54781	538 aa		7.33	□□□□□ -1.24
MSB3	YNL293W	REC102	Q02721	264 aa		7.33	□□□□□ -1.24
MSB3	YNL293W	SPO20	Q04359	397 aa		7.33	□□□□□ -1.24
MSB3	YNL293W	YDR514C	Q04408	483 aa		7.33	□□□□□ -1.24
MSB3	YNL293W	YPL191C	Q08930	360 aa		7.33	□□□□□ -1.24
MSB3	YNL293W	HIS4	P00815	799 aa	Known RBP	7.32	□□□□□ -1.24
MSB3	YNL293W	LAT1	P12695	482 aa	Known RBP	7.32	□□□□□ -1.24
MSB3	YNL293W	PTP1	P25044	335 aa		7.32	□□□□□ -1.24
MSB3	YNL293W	RPS5	P26783	225 aa	Known RBP	7.32	□□□□□ -1.24
MSB3	YNL293W	CYM1	P32898	989 aa		7.32	□□□□□ -1.24
MSB3	YNL293W	GRS1	P38088	690 aa	Known RBP	7.32	□□□□□ -1.24
MSB3	YNL293W	TDA3	P38758	523 aa		7.32	□□□□□ -1.24
MSB3	YNL293W	APE4	P38821	490 aa		7.32	□□□□□ -1.24
MSB3	YNL293W	VMA7	P39111	118 aa		7.32	□□□□□ -1.24
MSB3	YNL293W	BUB1	P41695	1021 aa	Known RBP RIP-Chip data	7.32	□□□□□ -1.24	not detected
MSB3	YNL293W	LSM8	P47093	109 aa	Known RBP	7.32	□□□□□ -1.24
MSB3	YNL293W	YGR016W	P53209	190 aa		7.32	□□□□□ -1.24
MSB3	YNL293W	SVL3	Q03088	825 aa	Known RBP	7.32	□□□□□ -1.24
MSB3	YNL293W	CLU1	Q03690	1277 aa	Known RBP	7.32	□□□□□ -1.24
MSB3	YNL293W	BNA7	Q04066	261 aa		7.32	□□□□□ -1.24
MSB3	YNL293W	TOS4	Q06266	489 aa		7.32	□□□□□ -1.24
MSB3	YNL293W	NDE2	Q07500	545 aa		7.32	□□□□□ -1.24
MSB3	YNL293W	PEX15	Q08215	383 aa		7.32	□□□□□ -1.24
MSB3	YNL293W	AIM41	Q12032	185 aa		7.32	□□□□□ -1.24
MSB3	YNL293W	MCD1	Q12158	566 aa		7.32	□□□□□ -1.24
MSB3	YNL293W	SNF1	P06782	633 aa	Known RBP	7.31	□□□□□ -1.24
MSB3	YNL293W	MTF2	P10849	440 aa		7.31	□□□□□ -1.24
MSB3	YNL293W	HXT2	P23585	541 aa		7.31	□□□□□ -1.24
MSB3	YNL293W	CAD1	P24813	409 aa	Known RBP	7.31	□□□□□ -1.24
MSB3	YNL293W	SBE22	P38814	852 aa		7.31	□□□□□ -1.24
MSB3	YNL293W	SEC31	P38968	1273 aa	Known RBP	7.31	□□□□□ -1.24
MSB3	YNL293W	GDH3	P39708	457 aa		7.31	□□□□□ -1.24
MSB3	YNL293W	SSP120	P39931	234 aa	Known RBP	7.31	□□□□□ -1.24
MSB3	YNL293W	QRI1	P43123	477 aa	Known RBP	7.31	□□□□□ -1.24
MSB3	YNL293W	NUP42	P49686	430 aa	Known RBP	7.31	□□□□□ -1.24
MSB3	YNL293W	TAF6	P53040	516 aa		7.31	□□□□□ -1.24
MSB3	YNL293W	RET3	P53600	189 aa		7.31	□□□□□ -1.24
MSB3	YNL293W	NAF1	P53919	492 aa	Known RBP	7.31	□□□□□ -1.24
MSB3	YNL293W	YNL040W	P53960	456 aa	Predicted RBP	7.31	□□□□□ -1.24
MSB3	YNL293W	ACS1	Q01574	713 aa		7.31	□□□□□ -1.24
MSB3	YNL293W	PET117	Q02771	107 aa		7.31	□□□□□ -1.24
MSB3	YNL293W	RRN5	Q02983	363 aa		7.31	□□□□□ -1.24
MSB3	YNL293W	YPL034W	Q03083	165 aa		7.31	□□□□□ -1.24
MSB3	YNL293W	CSI1	Q04368	295 aa		7.31	□□□□□ -1.24
MSB3	YNL293W	IVY1	Q04934	453 aa		7.31	□□□□□ -1.24
MSB3	YNL293W	NSE3	Q05541	303 aa		7.31	□□□□□ -1.24
MSB3	YNL293W	SET6	Q12529	373 aa		7.31	□□□□□ -1.24
MSB3	YNL293W	YBT1	P32386	1661 aa		7.31	□□□□□ -1.24
MSB3	YNL293W	LTE1	P07866	1435 aa		7.31	□□□□□ -1.24
MSB3	YNL293W	GAL1	P04385	528 aa		7.31	□□□□□ -1.24
MSB3	YNL293W	CBP6	P07253	162 aa	Predicted RBP	7.31	□□□□□ -1.24
MSB3	YNL293W	YBL055C	P34220	418 aa	Predicted RBP	7.31	□□□□□ -1.24
MSB3	YNL293W	NAT2	P37293	288 aa		7.31	□□□□□ -1.24
MSB3	YNL293W	ERT1	P38140	529 aa		7.31	□□□□□ -1.24
MSB3	YNL293W	DOT6	P40059	670 aa	Known RBP	7.31	□□□□□ -1.24
MSB3	YNL293W	SMX2	P40204	77 aa	Known RBP	7.31	□□□□□ -1.24
MSB3	YNL293W	YGR111W	P53265	400 aa		7.31	□□□□□ -1.24
MSB3	YNL293W	GIM3	P53900	129 aa		7.31	□□□□□ -1.24
MSB3	YNL293W	URC2	Q04411	772 aa		7.31	□□□□□ -1.24
MSB3	YNL293W	ISW2	Q08773	1120 aa		7.31	□□□□□ -1.24
MSB3	YNL293W	HMS1	Q12398	434 aa		7.31	□□□□□ -1.24
MSB3	YNL293W	RPS7A	P26786	190 aa	Known RBP	7.3	□□□□□ -1.24
MSB3	YNL293W	DBF20	P32328	564 aa		7.3	□□□□□ -1.24
MSB3	YNL293W	GRX4	P32642	244 aa		7.3	□□□□□ -1.24
MSB3	YNL293W	PPQ1	P32945	549 aa		7.3	□□□□□ -1.24
MSB3	YNL293W	RFT1	P38206	574 aa	Predicted RBP	7.3	□□□□□ -1.24
MSB3	YNL293W	YMR262W	P38430	313 aa		7.3	□□□□□ -1.24
MSB3	YNL293W	YAP5	P40574	245 aa		7.3	□□□□□ -1.24
MSB3	YNL293W	FMP32	P43557	207 aa		7.3	□□□□□ -1.24
MSB3	YNL293W	RSM26	P47141	266 aa		7.3	□□□□□ -1.24
MSB3	YNL293W	SAP4	P53036	818 aa		7.3	□□□□□ -1.24
MSB3	YNL293W	RPL6A	Q02326	176 aa	Known RBP	7.3	□□□□□ -1.24
MSB3	YNL293W	YDR239C	Q03780	787 aa		7.3	□□□□□ -1.24
MSB3	YNL293W	SPO77	Q06134	477 aa		7.3	□□□□□ -1.24
MSB3	YNL293W	YLL032C	Q07834	825 aa	Known RBP RIP-Chip data	7.3	□□□□□ -1.24	not detected
MSB3	YNL293W	YAP7	Q08182	245 aa		7.3	□□□□□ -1.24
MSB3	YNL293W	HRK1	Q08732	759 aa	Known RBP	7.3	□□□□□ -1.24
MSB3	YNL293W	RAX1	Q08760	435 aa		7.3	□□□□□ -1.24
MSB3	YNL293W	REX3	Q12090	404 aa		7.3	□□□□□ -1.24
MSB3	YNL293W	UTP10	P42945	1769 aa	Known RBP	7.3	□□□□□ -1.24
MSB3	YNL293W	IML1	P47170	1584 aa		7.3	□□□□□ -1.24
MSB3	YNL293W	ATP12	P22135	325 aa		7.29	□□□□□ -1.24
MSB3	YNL293W	STB6	P36085	766 aa		7.29	□□□□□ -1.24
MSB3	YNL293W	AAP1	P37898	856 aa	Known RBP	7.29	□□□□□ -1.24
MSB3	YNL293W	KTR4	P38131	464 aa		7.29	□□□□□ -1.24
MSB3	YNL293W	COS111	P38308	924 aa		7.29	□□□□□ -1.24
MSB3	YNL293W	SOH1	P38633	127 aa		7.29	□□□□□ -1.24
MSB3	YNL293W	IMD2	P38697	523 aa	Known RBP	7.29	□□□□□ -1.24
MSB3	YNL293W	AIM2	P39721	246 aa		7.29	□□□□□ -1.24
MSB3	YNL293W	SSO2	P39926	295 aa		7.29	□□□□□ -1.24
MSB3	YNL293W	GID8	P40208	455 aa		7.29	□□□□□ -1.24
MSB3	YNL293W	EPS1	P40557	701 aa		7.29	□□□□□ -1.24
MSB3	YNL293W	BPL1	P48445	690 aa	Predicted RBP	7.29	□□□□□ -1.24
MSB3	YNL293W	DUS3	Q06053	668 aa	Known RBP	7.29	□□□□□ -1.24
MSB3	YNL293W	MRN1	Q08925	612 aa	Known RBP RIP-Chip data	7.29	□□□□□ -1.24	not detected
MSB3	YNL293W	NEW1	Q08972	1196 aa	Known RBP	7.29	□□□□□ -1.24
MSB3	YNL293W	SPE3	Q12074	293 aa	Known RBP	7.29	□□□□□ -1.24
MSB3	YNL293W	ATG34	Q12292	412 aa		7.29	□□□□□ -1.24

Retrieved 100 of 5,963 RNA–protein pairs in 24.6 ms