RNA–Protein interactions for RNA: YMR200W

ROT1, Transcript of Molecular chaperone involved in protein folding in ER, yeastyeast

Gene ROT1, Length 771 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ROT1YMR200W MTF2P10849 440 aa5.29□□□□□ -1.56
ROT1YMR200W GLK1P17709 500 aaKnown RBP5.29□□□□□ -1.56
ROT1YMR200W MIH1P23748 554 aa5.29□□□□□ -1.56
ROT1YMR200W YCL049CP25577 312 aa5.29□□□□□ -1.56
ROT1YMR200W SEC65P29478 273 aa5.29□□□□□ -1.56
ROT1YMR200W SDS22P36047 338 aa5.29□□□□□ -1.56
ROT1YMR200W FAT1P38225 669 aa5.29□□□□□ -1.56
ROT1YMR200W MAD3P47074 515 aa5.29□□□□□ -1.56
ROT1YMR200W SAP4P53036 818 aa5.29□□□□□ -1.56
ROT1YMR200W YPL071CQ02864 156 aa5.29□□□□□ -1.56
ROT1YMR200W YMR206WQ03695 313 aa5.29□□□□□ -1.56
ROT1YMR200W YMR155WQ03795 547 aa5.29□□□□□ -1.56
ROT1YMR200W HEL2Q05580 639 aaKnown RBP5.29□□□□□ -1.56
ROT1YMR200W MCH5Q08777 521 aa5.29□□□□□ -1.56
ROT1YMR200W HAL9Q12180 1030 aa5.29□□□□□ -1.56
ROT1YMR200W CEX1Q12453 761 aa5.29□□□□□ -1.56
ROT1YMR200W NOP56Q12460 504 aaKnown RBP RIP-Chip data5.29□□□□□ -1.56not detected
ROT1YMR200W TRX1P22217 103 aaKnown RBP5.28□□□□□ -1.56
ROT1YMR200W DUN1P39009 513 aa5.28□□□□□ -1.56
ROT1YMR200W RMD8P43620 662 aa5.28□□□□□ -1.56
ROT1YMR200W CPR6P53691 371 aaKnown RBP5.28□□□□□ -1.56
ROT1YMR200W DUS1P53759 423 aaKnown RBP5.28□□□□□ -1.56
ROT1YMR200W RNT1Q02555 471 aa5.28□□□□□ -1.56
ROT1YMR200W MUK1Q02866 612 aa5.28□□□□□ -1.56
ROT1YMR200W FCP1Q03254 732 aa5.28□□□□□ -1.56
ROT1YMR200W CWC2Q12046 339 aaPredicted RBP5.28□□□□□ -1.56
ROT1YMR200W SFI1Q12369 946 aa5.28□□□□□ -1.56
ROT1YMR200W SWM1Q12379 170 aa5.28□□□□□ -1.56
ROT1YMR200W TRM11Q12463 433 aa5.28□□□□□ -1.56
ROT1YMR200W INO80P53115 1489 aa5.27□□□□□ -1.57
ROT1YMR200W ALG7P07286 448 aa5.27□□□□□ -1.57
ROT1YMR200W ILS1P09436 1072 aaKnown RBP5.27□□□□□ -1.57
ROT1YMR200W PMS1P14242 873 aa5.27□□□□□ -1.57
ROT1YMR200W CKA1P15790 372 aa5.27□□□□□ -1.57
ROT1YMR200W NCP1P16603 691 aaKnown RBP5.27□□□□□ -1.57
ROT1YMR200W PFK2P16862 959 aaKnown RBP RIP-Chip data5.27□□□□□ -1.57not detected
ROT1YMR200W SUI2P20459 304 aaKnown RBP5.27□□□□□ -1.57
ROT1YMR200W UBC1P21734 215 aaKnown RBP5.27□□□□□ -1.57
ROT1YMR200W YBR225WP38321 900 aa5.27□□□□□ -1.57
ROT1YMR200W RRF1P38771 230 aa5.27□□□□□ -1.57
ROT1YMR200W YHR202WP38887 602 aa5.27□□□□□ -1.57
ROT1YMR200W EAF5P39995 279 aa5.27□□□□□ -1.57
ROT1YMR200W YER010CP40011 234 aa5.27□□□□□ -1.57
ROT1YMR200W LSM5P40089 93 aaKnown RBP5.27□□□□□ -1.57
ROT1YMR200W PUG1P40100 303 aa5.27□□□□□ -1.57
ROT1YMR200W PSF2P40359 213 aa5.27□□□□□ -1.57
ROT1YMR200W IMA5P40884 581 aa5.27□□□□□ -1.57
ROT1YMR200W LYS14P40971 790 aa5.27□□□□□ -1.57
ROT1YMR200W PUS2P53167 370 aa5.27□□□□□ -1.57
ROT1YMR200W YGR250CP53316 781 aaKnown RBP5.27□□□□□ -1.57
ROT1YMR200W VHS3Q08438 674 aa5.27□□□□□ -1.57
ROT1YMR200W TRM8Q12009 286 aa5.27□□□□□ -1.57
ROT1YMR200W YOR022CQ12204 715 aa5.27□□□□□ -1.57
ROT1YMR200W ISA2Q12425 185 aa5.27□□□□□ -1.57
ROT1YMR200W RVB2Q12464 471 aaKnown RBP5.27□□□□□ -1.57
ROT1YMR200W PPR1P07272 904 aaPredicted RBP5.26□□□□□ -1.57
ROT1YMR200W FUM1P08417 488 aaKnown RBP5.26□□□□□ -1.57
ROT1YMR200W YCL002CP25565 263 aa5.26□□□□□ -1.57
ROT1YMR200W CYS3P31373 394 aaKnown RBP5.26□□□□□ -1.57
ROT1YMR200W UME6P39001 836 aa5.26□□□□□ -1.57
ROT1YMR200W SCS2P40075 244 aaKnown RBP5.26□□□□□ -1.57
ROT1YMR200W KHA1P40309 873 aa5.26□□□□□ -1.57
ROT1YMR200W UBP7P40453 1071 aa5.26□□□□□ -1.57
ROT1YMR200W ARF3P40994 183 aaRIP-Chip data5.26□□□□□ -1.57not detected
ROT1YMR200W SEC27P41811 889 aaKnown RBP5.26□□□□□ -1.57
ROT1YMR200W STB4P50104 949 aa5.26□□□□□ -1.57
ROT1YMR200W LRS4Q04087 347 aaKnown RBP5.26□□□□□ -1.57
ROT1YMR200W TMN2Q04562 672 aa5.26□□□□□ -1.57
ROT1YMR200W SGT2Q12118 346 aaKnown RBP5.26□□□□□ -1.57
ROT1YMR200W MET17P06106 444 aa5.25□□□□□ -1.57
ROT1YMR200W VMA2P16140 517 aaKnown RBP5.25□□□□□ -1.57
ROT1YMR200W MNE1P24720 663 aa5.25□□□□□ -1.57
ROT1YMR200W SGF29P25554 259 aa5.25□□□□□ -1.57
ROT1YMR200W MDL1P33310 695 aa5.25□□□□□ -1.57
ROT1YMR200W TGL1P34163 548 aa5.25□□□□□ -1.57
ROT1YMR200W IFA38P38286 347 aa5.25□□□□□ -1.57
ROT1YMR200W RPP1P38786 293 aa5.25□□□□□ -1.57
ROT1YMR200W TIF4631P39935 952 aaKnown RBP5.25□□□□□ -1.57
ROT1YMR200W YJL068CP40363 299 aa5.25□□□□□ -1.57
ROT1YMR200W FKH2P41813 862 aa5.25□□□□□ -1.57
ROT1YMR200W OCA1P50946 238 aaPredicted RBP5.25□□□□□ -1.57
ROT1YMR200W RRT6P53117 311 aaPredicted RBP5.25□□□□□ -1.57
ROT1YMR200W ARE2P53629 642 aaKnown RBP5.25□□□□□ -1.57
ROT1YMR200W ASI2P53895 289 aa5.25□□□□□ -1.57
ROT1YMR200W NCS2P53923 493 aaPredicted RBP5.25□□□□□ -1.57
ROT1YMR200W SEC5P89102 971 aa5.25□□□□□ -1.57
ROT1YMR200W PSF3Q12146 194 aa5.25□□□□□ -1.57
ROT1YMR200W PGA3Q12746 312 aaKnown RBP5.25□□□□□ -1.57
ROT1YMR200W PHO5P00635 467 aa5.24□□□□□ -1.57
ROT1YMR200W ARG3P05150 338 aa5.24□□□□□ -1.57
ROT1YMR200W ADH4P10127 382 aa5.24□□□□□ -1.57
ROT1YMR200W CLB4P24871 460 aa5.24□□□□□ -1.57
ROT1YMR200W ERG3P32353 365 aa5.24□□□□□ -1.57
ROT1YMR200W NPR2P39923 615 aa5.24□□□□□ -1.57
ROT1YMR200W STL1P39932 569 aa5.24□□□□□ -1.57
ROT1YMR200W ELO3P40319 345 aa5.24□□□□□ -1.57
ROT1YMR200W HXT16P47185 567 aa5.24□□□□□ -1.57
ROT1YMR200W CTF18P49956 741 aa5.24□□□□□ -1.57
ROT1YMR200W NOG2P53742 486 aaKnown RBP5.24□□□□□ -1.57
ROT1YMR200W TIM11P81449 96 aaPredicted RBP5.24□□□□□ -1.57
Retrieved 100 of 5,963 RNA–protein pairs in 142.4 ms