RNA–Protein interactions for RNA: YLR074C

BUD20, Transcript of C2H2-type zinc finger protein required for ribosome assembly, yeastyeast

Gene BUD20, Length 501 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BUD20YLR074C MUM2P38236 366 aa8.28□□□□□ -1.08
BUD20YLR074C URA8P38627 578 aaPredicted RBP8.28□□□□□ -1.08
BUD20YLR074C RRP3P38712 501 aaKnown RBP8.28□□□□□ -1.08
BUD20YLR074C FIG4P42837 879 aa8.28□□□□□ -1.08
BUD20YLR074C GPD1Q00055 391 aaKnown RBP8.28□□□□□ -1.08
BUD20YLR074C GIR2Q03768 265 aaPredicted RBP8.28□□□□□ -1.08
BUD20YLR074C ARO80Q04052 950 aa8.28□□□□□ -1.08
BUD20YLR074C YLR046CQ12253 270 aa8.28□□□□□ -1.08
BUD20YLR074C GPR1Q12361 961 aa8.28□□□□□ -1.08
BUD20YLR074C MAK16P10962 306 aaPredicted RBP8.27□□□□□ -1.09
BUD20YLR074C DAL81P21657 970 aa8.27□□□□□ -1.09
BUD20YLR074C CYM1P32898 989 aa8.27□□□□□ -1.09
BUD20YLR074C YKL151CP36059 337 aa8.27□□□□□ -1.09
BUD20YLR074C UBP14P38237 781 aaKnown RBP8.27□□□□□ -1.09
BUD20YLR074C HOS3Q02959 697 aaKnown RBP8.27□□□□□ -1.09
BUD20YLR074C CSR1Q06705 408 aaKnown RBP8.27□□□□□ -1.09
BUD20YLR074C SUC2P00724 532 aa8.26□□□□□ -1.09
BUD20YLR074C CYC8P14922 966 aa8.26□□□□□ -1.09
BUD20YLR074C GEX1P25596 615 aa8.26□□□□□ -1.09
BUD20YLR074C YIH1P25637 258 aa8.26□□□□□ -1.09
BUD20YLR074C ABD1P32783 436 aaPredicted RBP8.26□□□□□ -1.09
BUD20YLR074C PMT1P33775 817 aa8.26□□□□□ -1.09
BUD20YLR074C GEX2P36173 615 aa8.26□□□□□ -1.09
BUD20YLR074C MRX6P48564 524 aa8.26□□□□□ -1.09
BUD20YLR074C COG7P53195 279 aa8.26□□□□□ -1.09
BUD20YLR074C RPL43AP0CX25 92 aaKnown RBP8.25□□□□□ -1.09
BUD20YLR074C RPL43BP0CX26 92 aa8.25□□□□□ -1.09
BUD20YLR074C ABF1P14164 731 aa8.25□□□□□ -1.09
BUD20YLR074C DAL2P25335 343 aa8.25□□□□□ -1.09
BUD20YLR074C CWP1P28319 239 aa8.25□□□□□ -1.09
BUD20YLR074C PRX1P34227 261 aaKnown RBP8.25□□□□□ -1.09
BUD20YLR074C CSG2P35206 410 aa8.25□□□□□ -1.09
BUD20YLR074C KTR7P40504 517 aa8.25□□□□□ -1.09
BUD20YLR074C AMA1P50082 593 aa8.25□□□□□ -1.09
BUD20YLR074C EMC4P53073 190 aa8.25□□□□□ -1.09
BUD20YLR074C PRM1P53835 661 aa8.25□□□□□ -1.09
BUD20YLR074C SUR7P54003 302 aa8.25□□□□□ -1.09
BUD20YLR074C PIR1Q03178 341 aa8.25□□□□□ -1.09
BUD20YLR074C GNT1Q12096 491 aa8.25□□□□□ -1.09
BUD20YLR074C PUF2Q12221 1075 aaKnown RBP RIP-Chip data8.25□□□□□ -1.09not detected
BUD20YLR074C SKM1Q12469 655 aa8.25□□□□□ -1.09
BUD20YLR074C ENO1P00924 437 aaKnown RBP8.24□□□□□ -1.09
BUD20YLR074C PAB1P04147 577 aaKnown RBP RIP-Chip data8.24□□□□□ -1.09 RIP-Chip
BUD20YLR074C SBP1P10080 294 aaKnown RBP8.24□□□□□ -1.09
BUD20YLR074C POL30P15873 258 aaKnown RBP8.24□□□□□ -1.09
BUD20YLR074C OM45P16547 393 aa8.24□□□□□ -1.09
BUD20YLR074C BEM1P29366 551 aa8.24□□□□□ -1.09
BUD20YLR074C TAE1P38340 232 aa8.24□□□□□ -1.09
BUD20YLR074C LAM1P38851 1228 aa8.24□□□□□ -1.09
BUD20YLR074C ELO1P39540 310 aa8.24□□□□□ -1.09
BUD20YLR074C STL1P39932 569 aa8.24□□□□□ -1.09
BUD20YLR074C REF2P42073 533 aaPredicted RBP8.24□□□□□ -1.09
BUD20YLR074C STU2P46675 888 aa8.24□□□□□ -1.09
BUD20YLR074C AIM14P53109 570 aa8.24□□□□□ -1.09
BUD20YLR074C UBP3Q01477 912 aaKnown RBP RIP-Chip data8.24□□□□□ -1.09not detected
BUD20YLR074C YOL075CQ08234 1294 aa8.24□□□□□ -1.09
BUD20YLR074C PPR1P07272 904 aaPredicted RBP8.23□□□□□ -1.09
BUD20YLR074C DYS1P38791 387 aa8.23□□□□□ -1.09
BUD20YLR074C COS5P47187 383 aa8.23□□□□□ -1.09
BUD20YLR074C TAN1P53072 289 aaPredicted RBP8.23□□□□□ -1.09
BUD20YLR074C RSM10Q03201 203 aa8.23□□□□□ -1.09
BUD20YLR074C YER152CP10356 443 aa8.22□□□□□ -1.09
BUD20YLR074C YEL075CP39972 122 aa8.22□□□□□ -1.09
BUD20YLR074C NBP35P52920 328 aa8.22□□□□□ -1.09
BUD20YLR074C ATG10Q07879 167 aa8.22□□□□□ -1.09
BUD20YLR074C YOL073CQ08232 322 aa8.22□□□□□ -1.09
BUD20YLR074C IPP1P00817 287 aaKnown RBP8.21□□□□□ -1.1
BUD20YLR074C LIP5P32875 414 aa8.21□□□□□ -1.1
BUD20YLR074C MRP4P32902 394 aa8.21□□□□□ -1.1
BUD20YLR074C CHS7P38843 316 aa8.21□□□□□ -1.1
BUD20YLR074C VAC8P39968 578 aa8.21□□□□□ -1.1
BUD20YLR074C MTO1P53070 669 aa8.21□□□□□ -1.1
BUD20YLR074C YNR063WP53749 607 aa8.21□□□□□ -1.1
BUD20YLR074C NPL3Q01560 414 aaKnown RBP RIP-Chip data8.21□□□□□ -1.1 RIP-Chip
BUD20YLR074C YDR444WQ04093 687 aa8.21□□□□□ -1.1
BUD20YLR074C VPS20Q04272 221 aa8.21□□□□□ -1.1
BUD20YLR074C YOL036WQ08206 761 aa8.21□□□□□ -1.1
BUD20YLR074C TFB4Q12004 338 aa8.21□□□□□ -1.1
BUD20YLR074C FRE7Q12333 620 aa8.21□□□□□ -1.1
BUD20YLR074C PEX11Q12462 236 aa8.21□□□□□ -1.1
BUD20YLR074C APM3P38153 483 aa8.2□□□□□ -1.1
BUD20YLR074C RFT1P38206 574 aaPredicted RBP8.2□□□□□ -1.1
BUD20YLR074C ALR2P43553 858 aa8.2□□□□□ -1.1
BUD20YLR074C KTR6P54070 446 aa8.2□□□□□ -1.1
BUD20YLR074C ORC3P54790 616 aa8.2□□□□□ -1.1
BUD20YLR074C DOS2P54858 310 aa8.2□□□□□ -1.1
BUD20YLR074C ADI1Q03677 179 aa8.2□□□□□ -1.1
BUD20YLR074C YLR297WQ05899 129 aa8.2□□□□□ -1.1
BUD20YLR074C THI20Q08224 551 aa8.2□□□□□ -1.1
BUD20YLR074C EMP46Q12396 444 aa8.2□□□□□ -1.1
BUD20YLR074C MIH1P23748 554 aa8.19□□□□□ -1.1
BUD20YLR074C SPT5P27692 1063 aaKnown RBP8.19□□□□□ -1.1
BUD20YLR074C HSL7P38274 827 aa8.19□□□□□ -1.1
BUD20YLR074C NPR3P38742 1146 aa8.19□□□□□ -1.1
BUD20YLR074C GLG2P47011 380 aa8.19□□□□□ -1.1
BUD20YLR074C ARA2Q04212 335 aa8.19□□□□□ -1.1
BUD20YLR074C COG4Q06096 861 aa8.19□□□□□ -1.1
BUD20YLR074C NAR1P23503 491 aaKnown RBP8.18□□□□□ -1.1
BUD20YLR074C SLD2P34252 453 aa8.18□□□□□ -1.1
BUD20YLR074C PCA1P38360 1216 aa8.18□□□□□ -1.1
Retrieved 100 of 5,963 RNA–protein pairs in 17 ms