RNA–Protein interactions for RNA: YLL040C

VPS13, Transcript of Protein involved in prospore membrane morphogenesis, yeastyeast

Gene VPS13, Length 9,435 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS13YLL040C ADP1P25371 1049 aa2.45□□□□□ -2.02
VPS13YLL040C URA7P28274 579 aaKnown RBP2.45□□□□□ -2.02
VPS13YLL040C AST1P35183 429 aa2.45□□□□□ -2.02
VPS13YLL040C YKL050CP35736 922 aa2.45□□□□□ -2.02
VPS13YLL040C RRT2P38332 387 aa2.45□□□□□ -2.02
VPS13YLL040C LYS9P38999 446 aa2.45□□□□□ -2.02
VPS13YLL040C SAH1P39954 449 aaKnown RBP2.45□□□□□ -2.02
VPS13YLL040C LGE1Q02796 332 aaKnown RBP2.45□□□□□ -2.02
VPS13YLL040C TAF11Q04226 346 aa2.45□□□□□ -2.02
VPS13YLL040C YCS4Q06156 1176 aa2.45□□□□□ -2.02
VPS13YLL040C ARG4P04076 463 aaPredicted RBP2.45□□□□□ -2.02
VPS13YLL040C KGD1P20967 1014 aaKnown RBP2.45□□□□□ -2.02
VPS13YLL040C AFT1P22149 690 aa2.45□□□□□ -2.02
VPS13YLL040C SPS22P25380 463 aa2.45□□□□□ -2.02
VPS13YLL040C STL1P39932 569 aa2.45□□□□□ -2.02
VPS13YLL040C CUL3P53202 744 aa2.45□□□□□ -2.02
VPS13YLL040C GAS5Q08193 484 aa2.45□□□□□ -2.02
VPS13YLL040C RNR1P21524 888 aaKnown RBP2.45□□□□□ -2.02
VPS13YLL040C BAS1P22035 811 aa2.45□□□□□ -2.02
VPS13YLL040C TRK2P28584 889 aa2.45□□□□□ -2.02
VPS13YLL040C PET10P36139 283 aa2.45□□□□□ -2.02
VPS13YLL040C VHC1P38329 1120 aa2.45□□□□□ -2.02
VPS13YLL040C CDC55Q00362 526 aa2.45□□□□□ -2.02
VPS13YLL040C REH1Q06709 432 aa2.45□□□□□ -2.02
VPS13YLL040C YDL057WQ07379 328 aa2.45□□□□□ -2.02
VPS13YLL040C ARP6Q12509 438 aa2.45□□□□□ -2.02
VPS13YLL040C ADF1Q2V2Q1 113 aa2.45□□□□□ -2.02
VPS13YLL040C MRP13P12686 339 aa2.44□□□□□ -2.02
VPS13YLL040C POL4P25615 582 aa2.44□□□□□ -2.02
VPS13YLL040C RAD55P38953 406 aa2.44□□□□□ -2.02
VPS13YLL040C DDI1P40087 428 aa2.44□□□□□ -2.02
VPS13YLL040C TEP1P53916 434 aa2.44□□□□□ -2.02
VPS13YLL040C SND1Q04007 877 aa2.44□□□□□ -2.02
VPS13YLL040C RPS4AP0CX35 261 aaKnown RBP2.44□□□□□ -2.02
VPS13YLL040C RPS4BP0CX36 261 aaKnown RBP2.44□□□□□ -2.02
VPS13YLL040C PWP1P21304 576 aaKnown RBP2.44□□□□□ -2.02
VPS13YLL040C PHO88P38264 188 aaPredicted RBP2.44□□□□□ -2.02
VPS13YLL040C BZZ1P38822 633 aa2.44□□□□□ -2.02
VPS13YLL040C DSE1P40077 573 aa2.44□□□□□ -2.02
VPS13YLL040C UBP2Q01476 1272 aa2.44□□□□□ -2.02
VPS13YLL040C FMP30Q02883 468 aa2.44□□□□□ -2.02
VPS13YLL040C HRR25P29295 494 aaKnown RBP2.44□□□□□ -2.02
VPS13YLL040C CBF2P32504 956 aa2.44□□□□□ -2.02
VPS13YLL040C PAH1P32567 862 aa2.44□□□□□ -2.02
VPS13YLL040C YJL055WP47044 245 aa2.44□□□□□ -2.02
VPS13YLL040C COG6P53959 839 aa2.44□□□□□ -2.02
VPS13YLL040C FMP25Q08023 583 aa2.44□□□□□ -2.02
VPS13YLL040C YEL077CQ3E7X8 1277 aa2.44□□□□□ -2.02
VPS13YLL040C FBP1P09201 348 aa2.44□□□□□ -2.02
VPS13YLL040C HSC82P15108 705 aaKnown RBP2.44□□□□□ -2.02
VPS13YLL040C CHS3P29465 1165 aa2.44□□□□□ -2.02
VPS13YLL040C CUE2P36075 443 aaKnown RBP2.44□□□□□ -2.02
VPS13YLL040C TVP38P36164 337 aa2.44□□□□□ -2.02
VPS13YLL040C YER137CP40083 148 aaKnown RBP2.44□□□□□ -2.02
VPS13YLL040C IGO1P53897 168 aa2.44□□□□□ -2.02
VPS13YLL040C ECM9Q02202 377 aa2.44□□□□□ -2.02
VPS13YLL040C MRPS16Q02608 121 aa2.44□□□□□ -2.02
VPS13YLL040C GAL2P13181 574 aa2.44□□□□□ -2.02
VPS13YLL040C MRM1P25270 412 aa2.44□□□□□ -2.02
VPS13YLL040C VPS21P36017 210 aaKnown RBP2.44□□□□□ -2.02
VPS13YLL040C AGX1P43567 385 aa2.44□□□□□ -2.02
VPS13YLL040C RBL2P48606 106 aaKnown RBP2.44□□□□□ -2.02
VPS13YLL040C PEX8P53248 589 aa2.44□□□□□ -2.02
VPS13YLL040C CLD1P53264 445 aa2.44□□□□□ -2.02
VPS13YLL040C NSG2P53898 299 aa2.44□□□□□ -2.02
VPS13YLL040C SCP160P06105 1222 aaKnown RBP RIP-Chip data2.44□□□□□ -2.02 RIP-Chip
VPS13YLL040C SLM5P25345 492 aaKnown RBP2.44□□□□□ -2.02
VPS13YLL040C PMI40P29952 429 aaKnown RBP2.44□□□□□ -2.02
VPS13YLL040C SPR1P32603 445 aa2.44□□□□□ -2.02
VPS13YLL040C SLD2P34252 453 aa2.44□□□□□ -2.02
VPS13YLL040C FES1P38260 290 aa2.44□□□□□ -2.02
VPS13YLL040C IRC5P43610 853 aa2.44□□□□□ -2.02
VPS13YLL040C NDL1Q06568 189 aa2.44□□□□□ -2.02
VPS13YLL040C TY3A-GQ12173 290 aa2.44□□□□□ -2.02
VPS13YLL040C TY3A-IQ99219 290 aa2.44□□□□□ -2.02
VPS13YLL040C AEP2P22136 580 aa2.44□□□□□ -2.02
VPS13YLL040C SMC1P32908 1225 aa2.44□□□□□ -2.02
VPS13YLL040C SER1P33330 395 aaKnown RBP2.44□□□□□ -2.02
VPS13YLL040C EAP1P36041 632 aaKnown RBP2.44□□□□□ -2.02
VPS13YLL040C JNM1P36224 373 aa2.44□□□□□ -2.02
VPS13YLL040C YPK3P38070 525 aa2.44□□□□□ -2.02
VPS13YLL040C MMS4P38257 691 aa2.44□□□□□ -2.02
VPS13YLL040C MBA1P38300 278 aa2.44□□□□□ -2.02
VPS13YLL040C ALA1P40825 983 aaKnown RBP2.44□□□□□ -2.02
VPS13YLL040C ROM1P53046 1155 aa2.44□□□□□ -2.02
VPS13YLL040C APP1P53933 587 aa2.44□□□□□ -2.02
VPS13YLL040C ABZ2Q03266 374 aa2.44□□□□□ -2.02
VPS13YLL040C YDR179W-AQ03983 463 aa2.44□□□□□ -2.02
VPS13YLL040C RCN2Q12044 265 aa2.44□□□□□ -2.02
VPS13YLL040C AHA1Q12449 350 aaKnown RBP2.44□□□□□ -2.02
VPS13YLL040C MED11Q99278 115 aa2.44□□□□□ -2.02
VPS13YLL040C MET8P15807 274 aa2.43□□□□□ -2.02
VPS13YLL040C VPS3P23643 1011 aa2.43□□□□□ -2.02
VPS13YLL040C PUF4P25339 888 aaKnown RBP RIP-Chip data2.43□□□□□ -2.02not detected
VPS13YLL040C FUN30P31380 1131 aa2.43□□□□□ -2.02
VPS13YLL040C GCD6P32501 712 aaKnown RBP2.43□□□□□ -2.02
VPS13YLL040C AXL2P38928 823 aa2.43□□□□□ -2.02
VPS13YLL040C SCC4P40090 624 aa2.43□□□□□ -2.02
VPS13YLL040C IST3P40565 148 aaPredicted RBP2.43□□□□□ -2.02
VPS13YLL040C CTR1P49573 406 aa2.43□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 58 ms