RNA–Protein interactions for RNA: YKR092C

SRP40, Transcript of Nucleolar serine-rich protein, yeastyeast

Gene SRP40, Length 1,221 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SRP40YKR092C SET2P46995 733 aaKnown RBP4.34□□□□□ -1.71
SRP40YKR092C YGR153WP48238 217 aa4.34□□□□□ -1.71
SRP40YKR092C AMA1P50082 593 aa4.34□□□□□ -1.71
SRP40YKR092C MUP1P50276 574 aa4.34□□□□□ -1.71
SRP40YKR092C SHE10P53075 577 aa4.34□□□□□ -1.71
SRP40YKR092C HOP2P53187 214 aa4.34□□□□□ -1.71
SRP40YKR092C SUN4P53616 420 aa4.34□□□□□ -1.71
SRP40YKR092C BRE5P53741 515 aaKnown RBP4.34□□□□□ -1.71
SRP40YKR092C TEX1P53851 422 aaKnown RBP4.34□□□□□ -1.71
SRP40YKR092C LEE1Q02799 301 aaKnown RBP4.34□□□□□ -1.71
SRP40YKR092C SVL3Q03088 825 aaKnown RBP4.34□□□□□ -1.71
SRP40YKR092C TAP42Q04372 366 aa4.34□□□□□ -1.71
SRP40YKR092C MRD1Q06106 887 aaKnown RBP4.34□□□□□ -1.71
SRP40YKR092C DBP9Q06218 594 aaKnown RBP4.34□□□□□ -1.71
SRP40YKR092C NDL1Q06568 189 aa4.34□□□□□ -1.71
SRP40YKR092C CLP1Q08685 445 aaPredicted RBP4.34□□□□□ -1.71
SRP40YKR092C TGL5Q12043 749 aa4.34□□□□□ -1.71
SRP40YKR092C DCS2Q12123 353 aa4.34□□□□□ -1.71
SRP40YKR092C RVB2Q12464 471 aaKnown RBP4.34□□□□□ -1.71
SRP40YKR092C BUD3P25558 1636 aa4.34□□□□□ -1.71
SRP40YKR092C YOR093CQ12275 1648 aa4.34□□□□□ -1.71
SRP40YKR092C RPA190P10964 1664 aaKnown RBP4.34□□□□□ -1.71
SRP40YKR092C BNR1P40450 1375 aa4.33□□□□□ -1.72
SRP40YKR092C FOB1O13329 566 aa4.33□□□□□ -1.72
SRP40YKR092C RPB2P08518 1224 aaKnown RBP4.33□□□□□ -1.72
SRP40YKR092C MER1P16523 270 aa4.33□□□□□ -1.72
SRP40YKR092C PET123P17558 318 aa4.33□□□□□ -1.72
SRP40YKR092C SRP54P20424 541 aaKnown RBP4.33□□□□□ -1.72
SRP40YKR092C PSO2P30620 661 aa4.33□□□□□ -1.72
SRP40YKR092C HIR2P32480 875 aa4.33□□□□□ -1.72
SRP40YKR092C APL2P36000 726 aaPredicted RBP4.33□□□□□ -1.72
SRP40YKR092C YKR075CP36155 307 aa4.33□□□□□ -1.72
SRP40YKR092C APN2P38207 520 aa4.33□□□□□ -1.72
SRP40YKR092C YHR112CP38716 378 aa4.33□□□□□ -1.72
SRP40YKR092C OTU2P38747 307 aaKnown RBP4.33□□□□□ -1.72
SRP40YKR092C PET100P38958 111 aa4.33□□□□□ -1.72
SRP40YKR092C OAF1P39720 1047 aaPredicted RBP4.33□□□□□ -1.72
SRP40YKR092C ELO3P40319 345 aa4.33□□□□□ -1.72
SRP40YKR092C CCT5P40413 562 aaKnown RBP4.33□□□□□ -1.72
SRP40YKR092C YJR039WP47107 1121 aa4.33□□□□□ -1.72
SRP40YKR092C BUL1P48524 976 aa4.33□□□□□ -1.72
SRP40YKR092C EFM5P53200 248 aaKnown RBP4.33□□□□□ -1.72
SRP40YKR092C SLI1P53304 468 aa4.33□□□□□ -1.72
SRP40YKR092C REC102Q02721 264 aa4.33□□□□□ -1.72
SRP40YKR092C SPC19Q03954 165 aa4.33□□□□□ -1.72
SRP40YKR092C GAD1Q04792 585 aa4.33□□□□□ -1.72
SRP40YKR092C ATG38Q05789 226 aaKnown RBP4.33□□□□□ -1.72
SRP40YKR092C PSR1Q07800 427 aa4.33□□□□□ -1.72
SRP40YKR092C SLK19Q08581 821 aaKnown RBP4.33□□□□□ -1.72
SRP40YKR092C YRM1Q12340 786 aa4.33□□□□□ -1.72
SRP40YKR092C RRI2Q12348 645 aa4.33□□□□□ -1.72
SRP40YKR092C ATG11Q12527 1178 aa4.33□□□□□ -1.72
SRP40YKR092C DRS2P39524 1355 aa4.32□□□□□ -1.72
SRP40YKR092C LAT1P12695 482 aaKnown RBP4.32□□□□□ -1.72
SRP40YKR092C TPM1P17536 199 aaKnown RBP4.32□□□□□ -1.72
SRP40YKR092C PHO84P25297 587 aaKnown RBP4.32□□□□□ -1.72
SRP40YKR092C MRC1P25588 1096 aa4.32□□□□□ -1.72
SRP40YKR092C TRZ1P36159 838 aaPredicted RBP4.32□□□□□ -1.72
SRP40YKR092C AKL1P38080 1108 aaKnown RBP4.32□□□□□ -1.72
SRP40YKR092C YHR202WP38887 602 aa4.32□□□□□ -1.72
SRP40YKR092C RTT105P40063 208 aa4.32□□□□□ -1.72
SRP40YKR092C YIR014WP40570 242 aa4.32□□□□□ -1.72
SRP40YKR092C YIR042CP40586 236 aa4.32□□□□□ -1.72
SRP40YKR092C MNN11P46985 422 aaKnown RBP4.32□□□□□ -1.72
SRP40YKR092C ENP2P48234 707 aaKnown RBP4.32□□□□□ -1.72
SRP40YKR092C ECM9Q02202 377 aa4.32□□□□□ -1.72
SRP40YKR092C RNT1Q02555 471 aa4.32□□□□□ -1.72
SRP40YKR092C ERB1Q04660 807 aaKnown RBP4.32□□□□□ -1.72
SRP40YKR092C RNH1Q04740 348 aa4.32□□□□□ -1.72
SRP40YKR092C YLR352WQ06479 807 aa4.32□□□□□ -1.72
SRP40YKR092C YLR040CQ07988 224 aa4.32□□□□□ -1.72
SRP40YKR092C FRE5Q08908 694 aa4.32□□□□□ -1.72
SRP40YKR092C YPL191CQ08930 360 aa4.32□□□□□ -1.72
SRP40YKR092C TRM13Q12383 476 aa4.32□□□□□ -1.72
SRP40YKR092C TAD3Q9URQ3 322 aa4.32□□□□□ -1.72
SRP40YKR092C SPO14P36126 1683 aa4.32□□□□□ -1.72
SRP40YKR092C ALG7P07286 448 aa4.31□□□□□ -1.72
SRP40YKR092C MRPL25P23369 157 aa4.31□□□□□ -1.72
SRP40YKR092C MRE11P32829 692 aa4.31□□□□□ -1.72
SRP40YKR092C TIF3P34167 436 aaKnown RBP4.31□□□□□ -1.72
SRP40YKR092C DID4P36108 232 aa4.31□□□□□ -1.72
SRP40YKR092C MIC60P36112 540 aa4.31□□□□□ -1.72
SRP40YKR092C YBR053CP38235 358 aa4.31□□□□□ -1.72
SRP40YKR092C SUL1P38359 859 aa4.31□□□□□ -1.72
SRP40YKR092C GID8P40208 455 aa4.31□□□□□ -1.72
SRP40YKR092C SDS3P40505 327 aa4.31□□□□□ -1.72
SRP40YKR092C PXA1P41909 870 aa4.31□□□□□ -1.72
SRP40YKR092C LAM5P43560 674 aa4.31□□□□□ -1.72
SRP40YKR092C YGR021WP53212 290 aa4.31□□□□□ -1.72
SRP40YKR092C SNZ1Q03148 297 aa4.31□□□□□ -1.72
SRP40YKR092C CTK1Q03957 528 aaKnown RBP4.31□□□□□ -1.72
SRP40YKR092C MCM21Q06675 368 aa4.31□□□□□ -1.72
SRP40YKR092C YDL144CQ07589 356 aa4.31□□□□□ -1.72
SRP40YKR092C ISA1Q07821 250 aaPredicted RBP4.31□□□□□ -1.72
SRP40YKR092C BMS1Q08965 1183 aaKnown RBP4.31□□□□□ -1.72
SRP40YKR092C AAD3P25612 363 aa4.3□□□□□ -1.72
SRP40YKR092C YKL050CP35736 922 aa4.3□□□□□ -1.72
SRP40YKR092C RXT2P38255 430 aa4.3□□□□□ -1.72
SRP40YKR092C PEX18P38855 283 aa4.3□□□□□ -1.72
SRP40YKR092C SPT8P38915 602 aa4.3□□□□□ -1.72
Retrieved 100 of 5,963 RNA–protein pairs in 70.8 ms