RNA–Protein interactions for RNA: YKR081C

RPF2, Transcript of Essential protein involved in rRNA maturation and ribosomal assembly, yeastyeast

Gene RPF2, Length 1,035 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPF2YKR081C CNE1P27825 502 aa5.17□□□□□ -1.58
RPF2YKR081C CAP1P28495 268 aaKnown RBP5.17□□□□□ -1.58
RPF2YKR081C GRX4P32642 244 aa5.17□□□□□ -1.58
RPF2YKR081C EHT1P38295 451 aa5.17□□□□□ -1.58
RPF2YKR081C LRO1P40345 661 aa5.17□□□□□ -1.58
RPF2YKR081C SQS1P53866 767 aaKnown RBP5.17□□□□□ -1.58
RPF2YKR081C ARR3Q06598 404 aa5.17□□□□□ -1.58
RPF2YKR081C YDL073WQ07454 984 aa5.17□□□□□ -1.58
RPF2YKR081C PEA2P40091 420 aa5.16□□□□□ -1.58
RPF2YKR081C ATG36P46983 293 aa5.16□□□□□ -1.58
RPF2YKR081C PEF1P53238 335 aa5.16□□□□□ -1.58
RPF2YKR081C BUD17P53727 317 aa5.16□□□□□ -1.58
RPF2YKR081C CPA2P03965 1118 aaKnown RBP5.15□□□□□ -1.59
RPF2YKR081C LOT5P34234 306 aa5.15□□□□□ -1.59
RPF2YKR081C IRC5P43610 853 aa5.15□□□□□ -1.59
RPF2YKR081C SPC105P53148 917 aa5.15□□□□□ -1.59
RPF2YKR081C RPS15Q01855 142 aaKnown RBP5.15□□□□□ -1.59
RPF2YKR081C SEG1Q04279 960 aa5.15□□□□□ -1.59
RPF2YKR081C TGS1Q12052 315 aa5.15□□□□□ -1.59
RPF2YKR081C VPS5Q92331 675 aa5.15□□□□□ -1.59
RPF2YKR081C LEU2P04173 364 aaPredicted RBP5.14□□□□□ -1.59
RPF2YKR081C YEL076C-AP0CX16 216 aa5.14□□□□□ -1.59
RPF2YKR081C YLR464WP0CX17 216 aa5.14□□□□□ -1.59
RPF2YKR081C ERG11P10614 530 aa5.14□□□□□ -1.59
RPF2YKR081C PMA2P19657 947 aa5.14□□□□□ -1.59
RPF2YKR081C VPS33P20795 691 aa5.14□□□□□ -1.59
RPF2YKR081C AAD3P25612 363 aa5.14□□□□□ -1.59
RPF2YKR081C TMT1P32643 299 aa5.14□□□□□ -1.59
RPF2YKR081C RMA1P36001 430 aaKnown RBP5.14□□□□□ -1.59
RPF2YKR081C YBR071WP38243 211 aa5.14□□□□□ -1.59
RPF2YKR081C YJL193WP39542 402 aa5.14□□□□□ -1.59
RPF2YKR081C YEL076CP39971 216 aa5.14□□□□□ -1.59
RPF2YKR081C COQ6P53318 479 aa5.14□□□□□ -1.59
RPF2YKR081C RPL7AP05737 244 aaKnown RBP5.13□□□□□ -1.59
RPF2YKR081C COX11P19516 300 aaKnown RBP5.13□□□□□ -1.59
RPF2YKR081C TAX4P47030 604 aa5.13□□□□□ -1.59
RPF2YKR081C SLD3P53135 668 aa5.13□□□□□ -1.59
RPF2YKR081C YNL018CP53976 612 aa5.13□□□□□ -1.59
RPF2YKR081C RIM13Q03792 727 aa5.13□□□□□ -1.59
RPF2YKR081C RPL7BQ12213 244 aaKnown RBP5.13□□□□□ -1.59
RPF2YKR081C TMA17Q12513 150 aa5.13□□□□□ -1.59
RPF2YKR081C WHI2P12611 486 aa5.12□□□□□ -1.59
RPF2YKR081C CWH43P25618 953 aa5.12□□□□□ -1.59
RPF2YKR081C CCL1P37366 393 aa5.12□□□□□ -1.59
RPF2YKR081C EMP65P40085 556 aa5.12□□□□□ -1.59
RPF2YKR081C USA1Q03714 838 aa5.12□□□□□ -1.59
RPF2YKR081C GFD1Q04839 188 aaKnown RBP5.12□□□□□ -1.59
RPF2YKR081C PGK1P00560 416 aaKnown RBP5.11□□□□□ -1.59
RPF2YKR081C SEC12P11655 471 aa5.11□□□□□ -1.59
RPF2YKR081C HOT13P36078 116 aa5.11□□□□□ -1.59
RPF2YKR081C MTD1Q02046 320 aaKnown RBP5.11□□□□□ -1.59
RPF2YKR081C CWC2Q12046 339 aaPredicted RBP5.11□□□□□ -1.59
RPF2YKR081C AI5_ALPHAQ9ZZX1 630 aa5.11□□□□□ -1.59
RPF2YKR081C TSR4P25040 408 aa5.1□□□□□ -1.59
RPF2YKR081C HEM12P32347 362 aaPredicted RBP5.1□□□□□ -1.59
RPF2YKR081C MDR1P53258 950 aa5.1□□□□□ -1.59
RPF2YKR081C HOL1P53389 586 aa5.1□□□□□ -1.59
RPF2YKR081C PEX15Q08215 383 aa5.1□□□□□ -1.59
RPF2YKR081C YOR378WQ08902 515 aa5.1□□□□□ -1.59
RPF2YKR081C YMR084WA2P2R3 262 aa5.09□□□□□ -1.59
RPF2YKR081C HEM1P09950 548 aaPredicted RBP5.09□□□□□ -1.59
RPF2YKR081C PCK1P10963 549 aa5.09□□□□□ -1.59
RPF2YKR081C PTP1P25044 335 aa5.09□□□□□ -1.59
RPF2YKR081C DSS4P32601 143 aa5.09□□□□□ -1.59
RPF2YKR081C PAF1P38351 445 aa5.09□□□□□ -1.59
RPF2YKR081C LTP1P40347 161 aa5.09□□□□□ -1.59
RPF2YKR081C SAP4P53036 818 aa5.09□□□□□ -1.59
RPF2YKR081C MNT2P53059 558 aa5.09□□□□□ -1.59
RPF2YKR081C COG6P53959 839 aa5.09□□□□□ -1.59
RPF2YKR081C NUP1P20676 1076 aa5.08□□□□□ -1.6
RPF2YKR081C RNR3P21672 869 aaKnown RBP5.08□□□□□ -1.6
RPF2YKR081C YJR120WP47157 116 aa5.08□□□□□ -1.6
RPF2YKR081C PIP2P52960 996 aa5.08□□□□□ -1.6
RPF2YKR081C KAR1P11927 433 aa5.07□□□□□ -1.6
RPF2YKR081C APN1P22936 367 aa5.07□□□□□ -1.6
RPF2YKR081C RPC34P32910 317 aa5.07□□□□□ -1.6
RPF2YKR081C YPT10P38146 199 aa5.07□□□□□ -1.6
RPF2YKR081C SSP120P39931 234 aaKnown RBP5.07□□□□□ -1.6
RPF2YKR081C STL1P39932 569 aa5.07□□□□□ -1.6
RPF2YKR081C EAF5P39995 279 aa5.07□□□□□ -1.6
RPF2YKR081C OPT1P40897 799 aa5.07□□□□□ -1.6
RPF2YKR081C BET2P20133 325 aa5.06□□□□□ -1.6
RPF2YKR081C MBR1P23493 339 aa5.06□□□□□ -1.6
RPF2YKR081C GAT1P43574 510 aa5.06□□□□□ -1.6
RPF2YKR081C BNA3P47039 444 aaKnown RBP5.06□□□□□ -1.6
RPF2YKR081C ECM38Q05902 660 aaPredicted RBP5.06□□□□□ -1.6
RPF2YKR081C IRC3Q06683 689 aa5.06□□□□□ -1.6
RPF2YKR081C ARG1P22768 420 aa5.05□□□□□ -1.6
RPF2YKR081C MRC1P25588 1096 aa5.05□□□□□ -1.6
RPF2YKR081C YFL015CP43578 164 aa5.05□□□□□ -1.6
RPF2YKR081C ORM2Q06144 216 aa5.05□□□□□ -1.6
RPF2YKR081C HOS1Q12214 470 aa5.05□□□□□ -1.6
RPF2YKR081C URA3P03962 267 aa5.04□□□□□ -1.6
RPF2YKR081C AAC1P04710 309 aa5.04□□□□□ -1.6
RPF2YKR081C AQY1P0CD91 305 aa5.04□□□□□ -1.6
RPF2YKR081C CBP3P21560 335 aa5.04□□□□□ -1.6
RPF2YKR081C MRPL9P31334 269 aa5.04□□□□□ -1.6
RPF2YKR081C PET309P32522 965 aaPredicted RBP5.04□□□□□ -1.6
RPF2YKR081C TFC4P33339 1025 aa5.04□□□□□ -1.6
RPF2YKR081C APD1P38281 316 aa5.04□□□□□ -1.6
Retrieved 100 of 5,963 RNA–protein pairs in 109 ms