RNA–Protein interactions for RNA: YKL020C

SPT23, Transcript of ER membrane protein involved in regulation of OLE1 transcription, yeast

Gene SPT23, Length 3,249 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SPT23	YKL020C	SNF1	P06782	633 aa	Known RBP	4.05	□□□□□ -1.76
SPT23	YKL020C	BAS1	P22035	811 aa		4.05	□□□□□ -1.76
SPT23	YKL020C	RAM2	P29703	316 aa		4.05	□□□□□ -1.76
SPT23	YKL020C	LAS1	P36146	502 aa	Predicted RBP	4.05	□□□□□ -1.76
SPT23	YKL020C	MSG5	P38590	489 aa		4.05	□□□□□ -1.76
SPT23	YKL020C	SOH1	P38633	127 aa		4.05	□□□□□ -1.76
SPT23	YKL020C	AST2	P39945	430 aa	Known RBP	4.05	□□□□□ -1.76
SPT23	YKL020C	SNL1	P40548	159 aa		4.05	□□□□□ -1.76
SPT23	YKL020C	BNA3	P47039	444 aa	Known RBP	4.05	□□□□□ -1.76
SPT23	YKL020C	BRO1	P48582	844 aa		4.05	□□□□□ -1.76
SPT23	YKL020C	GNP1	P48813	663 aa		4.05	□□□□□ -1.76
SPT23	YKL020C	NCS6	P53088	359 aa		4.05	□□□□□ -1.76
SPT23	YKL020C	MRM2	P53123	320 aa		4.05	□□□□□ -1.76
SPT23	YKL020C	DSE4	P53753	1117 aa		4.05	□□□□□ -1.76
SPT23	YKL020C	HMO1	Q03973	246 aa	Known RBP	4.05	□□□□□ -1.76
SPT23	YKL020C	PUS7	Q08647	676 aa	Known RBP	4.05	□□□□□ -1.76
SPT23	YKL020C	ISW2	Q08773	1120 aa		4.05	□□□□□ -1.76
SPT23	YKL020C	NEW1	Q08972	1196 aa	Known RBP	4.05	□□□□□ -1.76
SPT23	YKL020C	YOR131C	Q12486	218 aa		4.05	□□□□□ -1.76
SPT23	YKL020C	PRI1	P10363	409 aa		4.05	□□□□□ -1.76
SPT23	YKL020C	DBP3	P20447	523 aa	Known RBP	4.05	□□□□□ -1.76
SPT23	YKL020C	RAD57	P25301	460 aa		4.05	□□□□□ -1.76
SPT23	YKL020C	GCG1	P32656	232 aa	Known RBP	4.05	□□□□□ -1.76
SPT23	YKL020C	SDS22	P36047	338 aa		4.05	□□□□□ -1.76
SPT23	YKL020C	MNN1	P39106	762 aa		4.05	□□□□□ -1.76
SPT23	YKL020C	YIL077C	P40508	320 aa		4.05	□□□□□ -1.76
SPT23	YKL020C	ENT3	P47160	408 aa		4.05	□□□□□ -1.76
SPT23	YKL020C	MEC3	Q02574	474 aa		4.05	□□□□□ -1.76
SPT23	YKL020C	SRT1	Q03175	343 aa		4.05	□□□□□ -1.76
SPT23	YKL020C	RPN9	Q04062	393 aa	Known RBP	4.05	□□□□□ -1.76
SPT23	YKL020C	GFD1	Q04839	188 aa	Known RBP	4.05	□□□□□ -1.76
SPT23	YKL020C	PDR8	Q06149	701 aa		4.05	□□□□□ -1.76
SPT23	YKL020C	YPD1	Q07688	167 aa		4.05	□□□□□ -1.76
SPT23	YKL020C	NCR1	Q12200	1170 aa		4.05	□□□□□ -1.76
SPT23	YKL020C	GPA2	P10823	449 aa		4.04	□□□□□ -1.76
SPT23	YKL020C	LAT1	P12695	482 aa	Known RBP	4.04	□□□□□ -1.76
SPT23	YKL020C	CLB2	P24869	491 aa		4.04	□□□□□ -1.76
SPT23	YKL020C	PRP19	P32523	503 aa	Known RBP	4.04	□□□□□ -1.76
SPT23	YKL020C	MGM101	P32787	269 aa	Known RBP	4.04	□□□□□ -1.76
SPT23	YKL020C	YBL010C	P32788	280 aa		4.04	□□□□□ -1.76
SPT23	YKL020C	VPS21	P36017	210 aa	Known RBP	4.04	□□□□□ -1.76
SPT23	YKL020C	SEA4	P38164	1038 aa		4.04	□□□□□ -1.76
SPT23	YKL020C	YBR138C	P38277	524 aa		4.04	□□□□□ -1.76
SPT23	YKL020C	TDP1	P38319	544 aa		4.04	□□□□□ -1.76
SPT23	YKL020C	BCD1	P38772	366 aa		4.04	□□□□□ -1.76
SPT23	YKL020C	PAN5	P38787	379 aa		4.04	□□□□□ -1.76
SPT23	YKL020C	SAW1	P39735	261 aa		4.04	□□□□□ -1.76
SPT23	YKL020C	RPH1	P39956	796 aa		4.04	□□□□□ -1.76
SPT23	YKL020C	RTS2	P40962	232 aa		4.04	□□□□□ -1.76
SPT23	YKL020C	YFH7	P43591	353 aa		4.04	□□□□□ -1.76
SPT23	YKL020C	NOP9	P47077	666 aa	Known RBP	4.04	□□□□□ -1.76
SPT23	YKL020C	IMD3	P50095	523 aa	Known RBP	4.04	□□□□□ -1.76
SPT23	YKL020C	KXD1	P53158	218 aa		4.04	□□□□□ -1.76
SPT23	YKL020C	PEX8	P53248	589 aa		4.04	□□□□□ -1.76
SPT23	YKL020C	DIB1	Q06819	143 aa	Predicted RBP	4.04	□□□□□ -1.76
SPT23	YKL020C	SNA4	Q07549	140 aa		4.04	□□□□□ -1.76
SPT23	YKL020C	YDL109C	Q12103	647 aa		4.04	□□□□□ -1.76
SPT23	YKL020C	BI4	P03879	638 aa		4.04	□□□□□ -1.76
SPT23	YKL020C	MATALPHA2	P0CY08	210 aa		4.04	□□□□□ -1.76
SPT23	YKL020C	HMLALPHA2	P0CY09	210 aa		4.04	□□□□□ -1.76
SPT23	YKL020C	KIN3	P22209	435 aa		4.04	□□□□□ -1.76
SPT23	YKL020C	LCB1	P25045	558 aa	Known RBP	4.04	□□□□□ -1.76
SPT23	YKL020C	DMC1	P25453	334 aa		4.04	□□□□□ -1.76
SPT23	YKL020C	MCM4	P30665	933 aa	Known RBP	4.04	□□□□□ -1.76
SPT23	YKL020C	SMC1	P32908	1225 aa		4.04	□□□□□ -1.76
SPT23	YKL020C	NUP133	P36161	1157 aa		4.04	□□□□□ -1.76
SPT23	YKL020C	NOP4	P37838	685 aa	Known RBP	4.04	□□□□□ -1.76
SPT23	YKL020C	IES5	P40060	125 aa		4.04	□□□□□ -1.76
SPT23	YKL020C	EMP65	P40085	556 aa		4.04	□□□□□ -1.76
SPT23	YKL020C	PDS1	P40316	373 aa	Predicted RBP	4.04	□□□□□ -1.76
SPT23	YKL020C	TDA10	P42938	290 aa		4.04	□□□□□ -1.76
SPT23	YKL020C	COX16	P47081	118 aa		4.04	□□□□□ -1.76
SPT23	YKL020C	RBG2	P53295	368 aa	Known RBP	4.04	□□□□□ -1.76
SPT23	YKL020C	KAP120	Q02932	1032 aa		4.04	□□□□□ -1.76
SPT23	YKL020C	NSE5	Q03718	556 aa		4.04	□□□□□ -1.76
SPT23	YKL020C	ECM7	Q06200	448 aa		4.04	□□□□□ -1.76
SPT23	YKL020C	YFT2	Q06676	274 aa		4.04	□□□□□ -1.76
SPT23	YKL020C	YEH2	Q07950	538 aa		4.04	□□□□□ -1.76
SPT23	YKL020C	RPN8	Q08723	338 aa	Known RBP	4.04	□□□□□ -1.76
SPT23	YKL020C	AEP3	Q12089	606 aa		4.04	□□□□□ -1.76
SPT23	YKL020C	RTR2	Q12378	196 aa		4.04	□□□□□ -1.76
SPT23	YKL020C	CKI1	P20485	582 aa		4.04	□□□□□ -1.76
SPT23	YKL020C	ICL1	P28240	557 aa	Predicted RBP	4.04	□□□□□ -1.76
SPT23	YKL020C	EFT1	P32324	842 aa	Known RBP	4.04	□□□□□ -1.76
SPT23	YKL020C	BCK2	P33306	851 aa		4.04	□□□□□ -1.76
SPT23	YKL020C	AST1	P35183	429 aa		4.04	□□□□□ -1.76
SPT23	YKL020C	CAF4	P36130	643 aa		4.04	□□□□□ -1.76
SPT23	YKL020C	SHM1	P37292	490 aa	Predicted RBP	4.04	□□□□□ -1.76
SPT23	YKL020C	SWC5	P38326	303 aa		4.04	□□□□□ -1.76
SPT23	YKL020C	YHL017W	P38745	532 aa		4.04	□□□□□ -1.76
SPT23	YKL020C	NIT3	P49954	291 aa		4.04	□□□□□ -1.76
SPT23	YKL020C	COS6	P53344	381 aa		4.04	□□□□□ -1.76
SPT23	YKL020C	PGA2	P53903	129 aa		4.04	□□□□□ -1.76
SPT23	YKL020C	HIM1	Q06674	414 aa		4.04	□□□□□ -1.76
SPT23	YKL020C	THP3	Q12049	470 aa	Known RBP	4.04	□□□□□ -1.76
SPT23	YKL020C	NYV1	Q12255	253 aa		4.04	□□□□□ -1.76
SPT23	YKL020C	AVL9	Q12500	764 aa		4.04	□□□□□ -1.76
SPT23	YKL020C	IPP1	P00817	287 aa	Known RBP	4.03	□□□□□ -1.76
SPT23	YKL020C	CMD1	P06787	147 aa	Known RBP	4.03	□□□□□ -1.76
SPT23	YKL020C	MSD1	P15179	658 aa	Known RBP	4.03	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 19.8 ms