RNA–Protein interactions for RNA: YJR060W

CBF1, Transcript of Basic helix-loop-helix (bHLH) protein, yeastyeast

Gene CBF1, Length 1,056 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CBF1YJR060W FOB1O13329 566 aa5.8□□□□□ -1.48
CBF1YJR060W EFT1P32324 842 aaKnown RBP5.8□□□□□ -1.48
CBF1YJR060W ELM1P32801 640 aa5.8□□□□□ -1.48
CBF1YJR060W SEC6P32844 805 aa5.8□□□□□ -1.48
CBF1YJR060W BUD2P33314 1104 aa5.8□□□□□ -1.48
CBF1YJR060W SLA2P33338 968 aa5.8□□□□□ -1.48
CBF1YJR060W YKT6P36015 200 aaKnown RBP5.8□□□□□ -1.48
CBF1YJR060W THI6P41835 540 aa5.8□□□□□ -1.48
CBF1YJR060W VTC2P43585 828 aa5.8□□□□□ -1.48
CBF1YJR060W ENV11P53246 860 aa5.8□□□□□ -1.48
CBF1YJR060W MAP1Q01662 387 aaKnown RBP RIP-Chip data5.8□□□□□ -1.48not detected
CBF1YJR060W YLR001CQ07895 862 aa5.8□□□□□ -1.48
CBF1YJR060W BI4P03879 638 aa5.79□□□□□ -1.48
CBF1YJR060W YEL076C-AP0CX16 216 aa5.79□□□□□ -1.48
CBF1YJR060W YLR464WP0CX17 216 aa5.79□□□□□ -1.48
CBF1YJR060W PFK1P16861 987 aaKnown RBP5.79□□□□□ -1.48
CBF1YJR060W UBC1P21734 215 aaKnown RBP5.79□□□□□ -1.48
CBF1YJR060W CDC48P25694 835 aaKnown RBP5.79□□□□□ -1.48
CBF1YJR060W MSS51P32335 436 aa5.79□□□□□ -1.48
CBF1YJR060W HIR1P32479 840 aa5.79□□□□□ -1.48
CBF1YJR060W ATG19P35193 415 aa5.79□□□□□ -1.48
CBF1YJR060W YEL076CP39971 216 aa5.79□□□□□ -1.48
CBF1YJR060W CCT5P40413 562 aaKnown RBP5.79□□□□□ -1.48
CBF1YJR060W RSM25P40496 264 aa5.79□□□□□ -1.48
CBF1YJR060W YJR120WP47157 116 aa5.79□□□□□ -1.48
CBF1YJR060W PEX8P53248 589 aa5.79□□□□□ -1.48
CBF1YJR060W DIP5P53388 608 aa5.79□□□□□ -1.48
CBF1YJR060W NCS2P53923 493 aaPredicted RBP5.79□□□□□ -1.48
CBF1YJR060W RSM24Q03976 319 aa5.79□□□□□ -1.48
CBF1YJR060W ADY4Q05955 493 aa5.79□□□□□ -1.48
CBF1YJR060W CUR1Q06469 252 aa5.79□□□□□ -1.48
CBF1YJR060W YDL177CQ12257 170 aa5.79□□□□□ -1.48
CBF1YJR060W DDP1Q99321 188 aaKnown RBP5.79□□□□□ -1.48
CBF1YJR060W CDC9P04819 755 aa5.78□□□□□ -1.48
CBF1YJR060W PCK1P10963 549 aa5.78□□□□□ -1.48
CBF1YJR060W GAS1P22146 559 aaKnown RBP5.78□□□□□ -1.48
CBF1YJR060W MBR1P23493 339 aa5.78□□□□□ -1.48
CBF1YJR060W POT1P27796 417 aaKnown RBP RIP-Chip data5.78□□□□□ -1.48not detected
CBF1YJR060W PIH1P38768 344 aa5.78□□□□□ -1.48
CBF1YJR060W EAF5P39995 279 aa5.78□□□□□ -1.48
CBF1YJR060W YPT11P48559 417 aa5.78□□□□□ -1.48
CBF1YJR060W AZR1P50080 613 aa5.78□□□□□ -1.48
CBF1YJR060W EAF7P53911 425 aaKnown RBP5.78□□□□□ -1.48
CBF1YJR060W COQ9Q05779 260 aa5.78□□□□□ -1.48
CBF1YJR060W LAA1P39526 2014 aa5.77□□□□□ -1.49
CBF1YJR060W KIN2P13186 1147 aaKnown RBP5.77□□□□□ -1.49
CBF1YJR060W FUB1P25659 250 aa5.77□□□□□ -1.49
CBF1YJR060W APL1P27351 700 aa5.77□□□□□ -1.49
CBF1YJR060W YSC83P32792 385 aa5.77□□□□□ -1.49
CBF1YJR060W SWE1P32944 819 aa5.77□□□□□ -1.49
CBF1YJR060W REC104P33323 182 aa5.77□□□□□ -1.49
CBF1YJR060W SPC29P33419 253 aa5.77□□□□□ -1.49
CBF1YJR060W DID4P36108 232 aa5.77□□□□□ -1.49
CBF1YJR060W ABZ1P37254 787 aaPredicted RBP5.77□□□□□ -1.49
CBF1YJR060W PMC1P38929 1173 aaPredicted RBP5.77□□□□□ -1.49
CBF1YJR060W ALD5P40047 520 aaKnown RBP5.77□□□□□ -1.49
CBF1YJR060W CIR1P42940 261 aa5.77□□□□□ -1.49
CBF1YJR060W GPG1P53130 126 aa5.77□□□□□ -1.49
CBF1YJR060W SNO2P53823 222 aa5.77□□□□□ -1.49
CBF1YJR060W MRPL22P53881 309 aa5.77□□□□□ -1.49
CBF1YJR060W HFD1Q04458 532 aa5.77□□□□□ -1.49
CBF1YJR060W PSR2Q07949 397 aa5.77□□□□□ -1.49
CBF1YJR060W YOR352WQ08816 343 aa5.77□□□□□ -1.49
CBF1YJR060W YDR524C-BQ3E6R4 66 aa5.77□□□□□ -1.49
CBF1YJR060W TMA7Q3E764 64 aaKnown RBP5.77□□□□□ -1.49
CBF1YJR060W WHI2P12611 486 aa5.76□□□□□ -1.49
CBF1YJR060W ISY1P21374 235 aaPredicted RBP5.76□□□□□ -1.49
CBF1YJR060W CDC15P27636 974 aa5.76□□□□□ -1.49
CBF1YJR060W MSP1P28737 362 aa5.76□□□□□ -1.49
CBF1YJR060W DPH2P32461 534 aa5.76□□□□□ -1.49
CBF1YJR060W CDC12P32468 407 aaKnown RBP5.76□□□□□ -1.49
CBF1YJR060W COT1P32798 439 aa5.76□□□□□ -1.49
CBF1YJR060W YER130CP39959 443 aa5.76□□□□□ -1.49
CBF1YJR060W TOK1P40310 691 aa5.76□□□□□ -1.49
CBF1YJR060W SGM1P47166 707 aa5.76□□□□□ -1.49
CBF1YJR060W VID30P53076 958 aa5.76□□□□□ -1.49
CBF1YJR060W CYC1P00044 109 aaPredicted RBP5.75□□□□□ -1.49
CBF1YJR060W IME2P32581 645 aa5.75□□□□□ -1.49
CBF1YJR060W SAC6P32599 642 aaKnown RBP5.75□□□□□ -1.49
CBF1YJR060W SKG6P32900 734 aaPredicted RBP5.75□□□□□ -1.49
CBF1YJR060W YEL1P34225 687 aa5.75□□□□□ -1.49
CBF1YJR060W PPS1P38148 807 aa5.75□□□□□ -1.49
CBF1YJR060W UBP13P38187 747 aa5.75□□□□□ -1.49
CBF1YJR060W MGS1P40151 587 aa5.75□□□□□ -1.49
CBF1YJR060W CCM1P48237 864 aaPredicted RBP5.75□□□□□ -1.49
CBF1YJR060W SHE10P53075 577 aa5.75□□□□□ -1.49
CBF1YJR060W CUL3P53202 744 aa5.75□□□□□ -1.49
CBF1YJR060W CAF130P53280 1122 aaPredicted RBP5.75□□□□□ -1.49
CBF1YJR060W RTT102P53330 157 aa5.75□□□□□ -1.49
CBF1YJR060W SKY1Q03656 742 aa5.75□□□□□ -1.49
CBF1YJR060W SLX4Q12098 748 aa5.75□□□□□ -1.49
CBF1YJR060W OSW2Q12202 724 aa5.75□□□□□ -1.49
CBF1YJR060W GPA1P08539 472 aa5.74□□□□□ -1.49
CBF1YJR060W SWI6P09959 803 aa5.74□□□□□ -1.49
CBF1YJR060W CMP2P14747 604 aa5.74□□□□□ -1.49
CBF1YJR060W RNQ1P25367 405 aa5.74□□□□□ -1.49
CBF1YJR060W YKL151CP36059 337 aa5.74□□□□□ -1.49
CBF1YJR060W POA1P38218 177 aa5.74□□□□□ -1.49
CBF1YJR060W YBR071WP38243 211 aa5.74□□□□□ -1.49
CBF1YJR060W DJP1P40564 432 aa5.74□□□□□ -1.49
Retrieved 100 of 5,963 RNA–protein pairs in 61.8 ms