RNA–Protein interactions for RNA: YJL176C

SWI3, Transcript of Subunit of the SWI/SNF chromatin remodeling complex, yeast

Gene SWI3, Length 2,478 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SWI3	YJL176C	COQ6	P53318	479 aa		4.83	□□□□□ -1.64
SWI3	YJL176C	NOG2	P53742	486 aa	Known RBP	4.83	□□□□□ -1.64
SWI3	YJL176C	RTN1	Q04947	295 aa	Known RBP	4.83	□□□□□ -1.64
SWI3	YJL176C	ECM38	Q05902	660 aa	Predicted RBP	4.83	□□□□□ -1.64
SWI3	YJL176C	YBL111C	Q3E7Y5	667 aa		4.83	□□□□□ -1.64
SWI3	YJL176C	MET16	P18408	261 aa	Predicted RBP	4.82	□□□□□ -1.64
SWI3	YJL176C	CAP1	P28495	268 aa	Known RBP	4.82	□□□□□ -1.64
SWI3	YJL176C	SEC6	P32844	805 aa		4.82	□□□□□ -1.64
SWI3	YJL176C	KTR4	P38131	464 aa		4.82	□□□□□ -1.64
SWI3	YJL176C	IMP4	P53941	290 aa	Known RBP	4.82	□□□□□ -1.64
SWI3	YJL176C	BET4	Q00618	327 aa		4.82	□□□□□ -1.64
SWI3	YJL176C	YPL014W	Q02606	381 aa		4.82	□□□□□ -1.64
SWI3	YJL176C	INA17	Q02888	182 aa		4.82	□□□□□ -1.64
SWI3	YJL176C	NGL3	Q03210	505 aa		4.82	□□□□□ -1.64
SWI3	YJL176C	YMR114C	Q04471	368 aa	Known RBP	4.82	□□□□□ -1.64
SWI3	YJL176C	SML1	Q04964	104 aa		4.82	□□□□□ -1.64
SWI3	YJL176C	KAP95	Q06142	861 aa	Known RBP	4.82	□□□□□ -1.64
SWI3	YJL176C	NSE1	Q07913	336 aa		4.82	□□□□□ -1.64
SWI3	YJL176C	YOR387C	Q08910	206 aa		4.82	□□□□□ -1.64
SWI3	YJL176C	PUF2	Q12221	1075 aa	Known RBP RIP-Chip data	4.82	□□□□□ -1.64	RIP-Chip
SWI3	YJL176C	RPS14A	P06367	137 aa	Known RBP	4.82	□□□□□ -1.64
SWI3	YJL176C	FUS1	P11710	512 aa		4.82	□□□□□ -1.64
SWI3	YJL176C	URA8	P38627	578 aa	Predicted RBP	4.82	□□□□□ -1.64
SWI3	YJL176C	NEM1	P38757	446 aa		4.82	□□□□□ -1.64
SWI3	YJL176C	FSH1	P38777	243 aa	Known RBP	4.82	□□□□□ -1.64
SWI3	YJL176C	RPS14B	P39516	138 aa	Known RBP	4.82	□□□□□ -1.64
SWI3	YJL176C	LCP5	P40079	357 aa	Predicted RBP	4.82	□□□□□ -1.64
SWI3	YJL176C	BST1	P43571	1029 aa		4.82	□□□□□ -1.64
SWI3	YJL176C	CNN1	P43618	361 aa		4.82	□□□□□ -1.64
SWI3	YJL176C	ATH1	P48016	1211 aa		4.82	□□□□□ -1.64
SWI3	YJL176C	MRX6	P48564	524 aa		4.82	□□□□□ -1.64
SWI3	YJL176C	PRP24	P49960	444 aa	Known RBP	4.82	□□□□□ -1.64
SWI3	YJL176C	ART5	P53244	586 aa	Known RBP	4.82	□□□□□ -1.64
SWI3	YJL176C	BIO5	P53744	561 aa	Known RBP	4.82	□□□□□ -1.64
SWI3	YJL176C	YDR278C	Q05612	105 aa		4.82	□□□□□ -1.64
SWI3	YJL176C	IZH4	Q99393	312 aa		4.82	□□□□□ -1.64
SWI3	YJL176C	HIS1	P00498	297 aa	Known RBP	4.81	□□□□□ -1.64
SWI3	YJL176C	MEI4	P29467	408 aa		4.81	□□□□□ -1.64
SWI3	YJL176C	PCA1	P38360	1216 aa		4.81	□□□□□ -1.64
SWI3	YJL176C	DOT6	P40059	670 aa	Known RBP	4.81	□□□□□ -1.64
SWI3	YJL176C	UBP7	P40453	1071 aa		4.81	□□□□□ -1.64
SWI3	YJL176C	MNN11	P46985	422 aa	Known RBP	4.81	□□□□□ -1.64
SWI3	YJL176C	BOP3	P53958	396 aa		4.81	□□□□□ -1.64
SWI3	YJL176C	ARA2	Q04212	335 aa		4.81	□□□□□ -1.64
SWI3	YJL176C	THI7	Q05998	598 aa		4.81	□□□□□ -1.64
SWI3	YJL176C	FLC1	Q08967	793 aa		4.81	□□□□□ -1.64
SWI3	YJL176C	SPO21	Q12411	609 aa		4.81	□□□□□ -1.64
SWI3	YJL176C	TUB3	P09734	445 aa	Known RBP	4.81	□□□□□ -1.64
SWI3	YJL176C	REV1	P12689	985 aa		4.81	□□□□□ -1.64
SWI3	YJL176C	SWE1	P32944	819 aa		4.81	□□□□□ -1.64
SWI3	YJL176C	TIF5	P38431	405 aa	Known RBP	4.81	□□□□□ -1.64
SWI3	YJL176C	VAC8	P39968	578 aa		4.81	□□□□□ -1.64
SWI3	YJL176C	EDC3	P39998	551 aa	Known RBP	4.81	□□□□□ -1.64
SWI3	YJL176C	ARG2	P40360	574 aa		4.81	□□□□□ -1.64
SWI3	YJL176C	NDC80	P40460	691 aa		4.81	□□□□□ -1.64
SWI3	YJL176C	YML6	P51998	286 aa		4.81	□□□□□ -1.64
SWI3	YJL176C	CWC22	P53333	577 aa	Known RBP	4.81	□□□□□ -1.64
SWI3	YJL176C	TRM112	P53738	135 aa	Predicted RBP	4.81	□□□□□ -1.64
SWI3	YJL176C	GRX8	Q05926	109 aa		4.81	□□□□□ -1.64
SWI3	YJL176C	ESC2	Q06340	456 aa		4.81	□□□□□ -1.64
SWI3	YJL176C	TPO1	Q07824	586 aa		4.81	□□□□□ -1.64
SWI3	YJL176C	MPD2	Q99316	277 aa		4.81	□□□□□ -1.64
SWI3	YJL176C	KIN3	P22209	435 aa		4.8	□□□□□ -1.64
SWI3	YJL176C	MRM1	P25270	412 aa		4.8	□□□□□ -1.64
SWI3	YJL176C	ADY2	P25613	283 aa		4.8	□□□□□ -1.64
SWI3	YJL176C	GPI10	P30777	616 aa		4.8	□□□□□ -1.64
SWI3	YJL176C	MET22	P32179	357 aa		4.8	□□□□□ -1.64
SWI3	YJL176C	HEM14	P40012	539 aa		4.8	□□□□□ -1.64
SWI3	YJL176C	RRT5	P43607	289 aa		4.8	□□□□□ -1.64
SWI3	YJL176C	TAN1	P53072	289 aa	Predicted RBP	4.8	□□□□□ -1.64
SWI3	YJL176C	YLR012C	Q07927	99 aa		4.8	□□□□□ -1.64
SWI3	YJL176C	CET1	O13297	549 aa	Predicted RBP	4.8	□□□□□ -1.64
SWI3	YJL176C	SFL1	P20134	766 aa		4.8	□□□□□ -1.64
SWI3	YJL176C	SLY1	P22213	666 aa		4.8	□□□□□ -1.64
SWI3	YJL176C	FUI1	P38196	639 aa		4.8	□□□□□ -1.64
SWI3	YJL176C	KAP104	P38217	918 aa	Known RBP	4.8	□□□□□ -1.64
SWI3	YJL176C	ARP1	P38696	384 aa		4.8	□□□□□ -1.64
SWI3	YJL176C	SAW1	P39735	261 aa		4.8	□□□□□ -1.64
SWI3	YJL176C	EMW1	P42842	904 aa	Known RBP	4.8	□□□□□ -1.64
SWI3	YJL176C	YJL132W	P47014	750 aa		4.8	□□□□□ -1.64
SWI3	YJL176C	RSM26	P47141	266 aa		4.8	□□□□□ -1.64
SWI3	YJL176C	VPS9	P54787	451 aa		4.8	□□□□□ -1.64
SWI3	YJL176C	DOS2	P54858	310 aa		4.8	□□□□□ -1.64
SWI3	YJL176C	ADI1	Q03677	179 aa		4.8	□□□□□ -1.64
SWI3	YJL176C	YMR206W	Q03695	313 aa		4.8	□□□□□ -1.64
SWI3	YJL176C	POB3	Q04636	552 aa	Known RBP	4.8	□□□□□ -1.64
SWI3	YJL176C	MCM16	Q12262	181 aa		4.8	□□□□□ -1.64
SWI3	YJL176C	GPM3	Q12326	303 aa		4.8	□□□□□ -1.64
SWI3	YJL176C	ZRT2	Q12436	422 aa		4.8	□□□□□ -1.64
SWI3	YJL176C	EFG1	Q3E705	233 aa	Known RBP	4.8	□□□□□ -1.64
SWI3	YJL176C	SEY1	Q99287	776 aa		4.8	□□□□□ -1.64
SWI3	YJL176C	BIT2	P38346	545 aa		4.79	□□□□□ -1.64
SWI3	YJL176C	AIM18	P38884	321 aa		4.79	□□□□□ -1.64
SWI3	YJL176C	SAK1	P38990	1142 aa		4.79	□□□□□ -1.64
SWI3	YJL176C	END3	P39013	349 aa		4.79	□□□□□ -1.64
SWI3	YJL176C	FLC2	P39719	783 aa		4.79	□□□□□ -1.64
SWI3	YJL176C	YEL028W	P39989	153 aa		4.79	□□□□□ -1.64
SWI3	YJL176C	SNG1	P46950	547 aa		4.79	□□□□□ -1.64
SWI3	YJL176C	RPC17	P47076	161 aa		4.79	□□□□□ -1.64
SWI3	YJL176C	RFX1	P48743	811 aa		4.79	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 27.1 ms