RNA–Protein interactions for RNA: YIR040C

YIR040C, Transcript of Dubious open reading frame, yeastyeast

Gene YIR040C, Length 333 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YIR040CYIR040C TRZ1P36159 838 aaPredicted RBP3.45□□□□□ -1.86
YIR040CYIR040C KEL1P38853 1164 aaKnown RBP3.45□□□□□ -1.86
YIR040CYIR040C AIM10P39965 576 aaKnown RBP3.45□□□□□ -1.86
YIR040CYIR040C IES5P40060 125 aa3.45□□□□□ -1.86
YIR040CYIR040C MNT3P40549 630 aa3.45□□□□□ -1.86
YIR040CYIR040C GCN20P43535 752 aaKnown RBP3.45□□□□□ -1.86
YIR040CYIR040C SNZ3P43545 298 aa3.45□□□□□ -1.86
YIR040CYIR040C EPL1P43572 832 aa3.45□□□□□ -1.86
YIR040CYIR040C SGM1P47166 707 aa3.45□□□□□ -1.86
YIR040CYIR040C YML6P51998 286 aa3.45□□□□□ -1.86
YIR040CYIR040C SNZ2P53824 298 aa3.45□□□□□ -1.86
YIR040CYIR040C IPI3P53877 555 aa3.45□□□□□ -1.86
YIR040CYIR040C CEG1Q01159 459 aaPredicted RBP3.45□□□□□ -1.86
YIR040CYIR040C SLU7Q02775 382 aaKnown RBP3.45□□□□□ -1.86
YIR040CYIR040C TIM50Q02776 476 aa3.45□□□□□ -1.86
YIR040CYIR040C INP2Q03824 705 aa3.45□□□□□ -1.86
YIR040CYIR040C ENV7Q12003 364 aa3.45□□□□□ -1.86
YIR040CYIR040C NTO1Q12311 748 aa3.45□□□□□ -1.86
YIR040CYIR040C SFI1Q12369 946 aa3.45□□□□□ -1.86
YIR040CYIR040C STH1P32597 1359 aa3.45□□□□□ -1.86
YIR040CYIR040C CTT1P06115 562 aa3.44□□□□□ -1.86
YIR040CYIR040C CDC16P09798 840 aa3.44□□□□□ -1.86
YIR040CYIR040C MSS116P15424 664 aaKnown RBP3.44□□□□□ -1.86
YIR040CYIR040C MRPL8P22353 238 aa3.44□□□□□ -1.86
YIR040CYIR040C RPC53P25441 422 aa3.44□□□□□ -1.86
YIR040CYIR040C KAR4P25583 335 aa3.44□□□□□ -1.86
YIR040CYIR040C PLC1P32383 869 aa3.44□□□□□ -1.86
YIR040CYIR040C YKL063CP35725 167 aa3.44□□□□□ -1.86
YIR040CYIR040C YKT6P36015 200 aaKnown RBP3.44□□□□□ -1.86
YIR040CYIR040C PBP2P38151 413 aaKnown RBP RIP-Chip data3.44□□□□□ -1.86not detected
YIR040CYIR040C YBR138CP38277 524 aa3.44□□□□□ -1.86
YIR040CYIR040C DED81P38707 554 aaKnown RBP3.44□□□□□ -1.86
YIR040CYIR040C VMA22P38784 181 aa3.44□□□□□ -1.86
YIR040CYIR040C CIN4P39110 191 aa3.44□□□□□ -1.86
YIR040CYIR040C VPS8P39702 1274 aa3.44□□□□□ -1.86
YIR040CYIR040C SAP1P39955 897 aaKnown RBP3.44□□□□□ -1.86
YIR040CYIR040C HUL4P40985 892 aa3.44□□□□□ -1.86
YIR040CYIR040C GPD2P41911 440 aaKnown RBP3.44□□□□□ -1.86
YIR040CYIR040C UBP6P43593 499 aaKnown RBP3.44□□□□□ -1.86
YIR040CYIR040C MDV1P47025 714 aa3.44□□□□□ -1.86
YIR040CYIR040C YJL055WP47044 245 aa3.44□□□□□ -1.86
YIR040CYIR040C MIG2P53035 382 aa3.44□□□□□ -1.86
YIR040CYIR040C DIP5P53388 608 aa3.44□□□□□ -1.86
YIR040CYIR040C UBX4P54730 416 aa3.44□□□□□ -1.86
YIR040CYIR040C GTR1Q00582 310 aa3.44□□□□□ -1.86
YIR040CYIR040C YML108WQ03759 105 aa3.44□□□□□ -1.86
YIR040CYIR040C RBA50Q04418 439 aa3.44□□□□□ -1.86
YIR040CYIR040C SPC2Q04969 178 aa3.44□□□□□ -1.86
YIR040CYIR040C EIS1Q05050 843 aaKnown RBP3.44□□□□□ -1.86
YIR040CYIR040C MED1Q12321 566 aa3.44□□□□□ -1.86
YIR040CYIR040C RTC1Q08281 1341 aa3.44□□□□□ -1.86
YIR040CYIR040C CAN1P04817 590 aa3.43□□□□□ -1.86
YIR040CYIR040C PUT4P15380 627 aa3.43□□□□□ -1.86
YIR040CYIR040C FUR1P18562 216 aaKnown RBP3.43□□□□□ -1.86
YIR040CYIR040C YAP1P19880 650 aaKnown RBP3.43□□□□□ -1.86
YIR040CYIR040C HCA4P20448 770 aaKnown RBP3.43□□□□□ -1.86
YIR040CYIR040C RFA1P22336 621 aaKnown RBP3.43□□□□□ -1.86
YIR040CYIR040C ROX1P25042 368 aa3.43□□□□□ -1.86
YIR040CYIR040C CHS3P29465 1165 aa3.43□□□□□ -1.86
YIR040CYIR040C SFP1P32432 683 aa3.43□□□□□ -1.86
YIR040CYIR040C RPN2P32565 945 aaKnown RBP3.43□□□□□ -1.86
YIR040CYIR040C XRS2P33301 854 aa3.43□□□□□ -1.86
YIR040CYIR040C TRM2P33753 639 aa3.43□□□□□ -1.86
YIR040CYIR040C RRP1P35178 278 aaPredicted RBP3.43□□□□□ -1.86
YIR040CYIR040C RMA1P36001 430 aaKnown RBP3.43□□□□□ -1.86
YIR040CYIR040C TEF4P36008 412 aaKnown RBP3.43□□□□□ -1.86
YIR040CYIR040C LHS1P36016 881 aa3.43□□□□□ -1.86
YIR040CYIR040C SRP72P38688 640 aaKnown RBP3.43□□□□□ -1.86
YIR040CYIR040C RTC3P38804 111 aaPredicted RBP3.43□□□□□ -1.86
YIR040CYIR040C KAP123P40069 1113 aaKnown RBP3.43□□□□□ -1.86
YIR040CYIR040C YIL108WP40483 696 aaKnown RBP3.43□□□□□ -1.86
YIR040CYIR040C SEC28P40509 296 aaKnown RBP3.43□□□□□ -1.86
YIR040CYIR040C PKP1P40530 394 aa3.43□□□□□ -1.86
YIR040CYIR040C CEP3P40969 608 aa3.43□□□□□ -1.86
YIR040CYIR040C CCT7P42943 550 aaKnown RBP3.43□□□□□ -1.86
YIR040CYIR040C GCD14P46959 383 aaPredicted RBP3.43□□□□□ -1.86
YIR040CYIR040C LIA1P47120 325 aaKnown RBP3.43□□□□□ -1.86
YIR040CYIR040C YGR153WP48238 217 aa3.43□□□□□ -1.86
YIR040CYIR040C MPS2P53159 387 aa3.43□□□□□ -1.86
YIR040CYIR040C LSB1P53281 241 aa3.43□□□□□ -1.86
YIR040CYIR040C SUN4P53616 420 aa3.43□□□□□ -1.86
YIR040CYIR040C YNL193WP53870 558 aa3.43□□□□□ -1.86
YIR040CYIR040C FYV6P53913 173 aa3.43□□□□□ -1.86
YIR040CYIR040C ASI1P54074 624 aa3.43□□□□□ -1.86
YIR040CYIR040C VPS9P54787 451 aa3.43□□□□□ -1.86
YIR040CYIR040C FMP30Q02883 468 aa3.43□□□□□ -1.86
YIR040CYIR040C NSE5Q03718 556 aa3.43□□□□□ -1.86
YIR040CYIR040C KRE28Q04431 385 aa3.43□□□□□ -1.86
YIR040CYIR040C OPY2Q06810 360 aa3.43□□□□□ -1.86
YIR040CYIR040C YDL124WQ07551 312 aaKnown RBP3.43□□□□□ -1.86
YIR040CYIR040C PPM2Q08282 695 aa3.43□□□□□ -1.86
YIR040CYIR040C SMF3Q12078 473 aaPredicted RBP3.43□□□□□ -1.86
YIR040CYIR040C CHS5Q12114 671 aaKnown RBP3.43□□□□□ -1.86
YIR040CYIR040C YRF1-4O13559 1382 aa3.42□□□□□ -1.86
YIR040CYIR040C YML133CQ03099 1374 aa3.42□□□□□ -1.86
YIR040CYIR040C YLL067CQ07888 1374 aa3.42□□□□□ -1.86
YIR040CYIR040C YLL066CQ99208 1374 aa3.42□□□□□ -1.86
YIR040CYIR040C TUB2P02557 457 aaKnown RBP3.42□□□□□ -1.86
YIR040CYIR040C RPP2AP05319 106 aaKnown RBP3.42□□□□□ -1.86
YIR040CYIR040C SSC1P0CS90 654 aaKnown RBP3.42□□□□□ -1.86
Retrieved 100 of 5,963 RNA–protein pairs in 23.4 ms